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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1486517..1487923- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009067-T1 ID=CBS51388_009067-T1|Name=CBS51388_009067-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1407bp|location=Sequence derived from alignment at An14:1486517..1487923- (Aspergillus niger CBS 513.88)
ATGGCGAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGC
GGTGCGGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGC
GCTCCAAGGCCTGCGCCACTGTATGCGAAAAGGCACCCTGAAATAATATA
GCTATCTTTACTTGACCCTAACATGATTTACAGGTCGCGGCTTGGAAGCT
ACGAGGGAATCTGCCACATCCAGTCGAGGCCACGGCCTTGCTAACGGATG
CTATCCTTCATGATGATGCCCTGAAAAATTCCATCTTCTCCATTCGGGCT
ACATACTCGGCTGCGTTCTGTCGGTATGACTATCTGCTTTGATTCATCGA
TTACATGATTACGCAACAAGTGTAACGATCACTAACGCCAATTAGATTCG
TGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAAAACCATGTTC
CAACGAGCCATTGATCTGGGCCTACCGGCCTCATTTGTGGAACTGCGTCA
CGAGGCGACGCATCGTGAACTGCCTTCTCTAACAGTGCTGCGCAATGCCA
CGCAGCGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGCCAAGACTGAT
CTGAGTGCTGATATGGTGCCCGTGTCAGAACCTGAGGCATTTGACGGTGC
TGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACTGAATTCGAGC
ACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAAGAAGAGGAGG
TTCCAGCAGAACGTCTCGTCTACGTCTACGCATTTGGTCTCGATATGCAA
GTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATCGTGGAGGACT
CGGTGTTGGTTCCTGCTGGACGGAAGTGAGTTTTCTTGATATTCTGATCG
TGTATGAACATCTATAAGCTGACTTGGTACAGGATGGGTGATTCCATGAC
GGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGCGGAGGGCC
ATCCCCCGGTCCTGGCATCGCTGACGGAGGAGATGGTGAATGTACTGGCC
TTTTCGGGCTCAAAGAACGTGAAAAGCGACCCTCAGCTCGAAGGATTATA
CATGTGGCTGGACCATATACTTCAATCGCCGGAATGGGGGTCTCGAAGAC
GACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCCAAC
CACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGGCGGACGATTT
AGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGGACG
GATCTGGTCTCAAGCGGACTGCAGATGCCGACGATTTGAAAGAGTTGAAG
AAATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCGTTAGGGAT
AGTATAG back to topCoding sequence (CDS) from alignment at An14:1486517..1487923- >CBS51388_009067-T1 ID=CBS51388_009067-T1|Name=CBS51388_009067-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4860bp|location=Sequence derived from alignment at An14:1486517..1487923- (Aspergillus niger CBS 513.88)
GATGGGTGATTCCATGACGGGCATGTTCGCTAAGTGGGATTCATTATTGC
AGATGCTCGCGGAGGGCCATCCCCCGGTCCTGGCATCGCTGACGGAGGAG
ATGGTGAATGTACTGGCCTTTTCGGGCTCAAAGAACGTGAAAAGCGACCC
TCAGCTCGAAGGATTATACATGTGGCTGGACCATATACTTCAATCGCCGG
AATGGGGGTCTCGAAGACGACTACTGTCCCACGCATATCTTCTTGCCGTT
TGCGAGCAGAGTTCCAACCACTGGACGACGCTTCTTAAGGAAAGCTTACA
GCAGAGGGCGGACGATTTAGCACCTAGCAAGCAGTCGTCCACGTCAAAGA
AGCAGTCGAAGAAGGACGGATCTGGTCTCAAGCGGACTGCAGATGCCGAC
GATTTGAAAGAGTTGAAGAAATTCGGATGGGAGACGGTAGATACGTGGGA
TACGCGACCGTTAGGGATAGTATAGATTCGTGACGGGGCTCGTCGACTCC
AAGCTGAACGGGCAGCGTAAAACCATGTTCCAACGAGCCATTGATCTGGG
CCTACCGGCCTCATTTGTGGAACTGCGTCACGAGGCGACGCATCGTGAAC
TGCCTTCTCTAACAGTGCTGCGCAATGCCACGCAGCGGTCCCTTGAGTGG
CTGTGGGACTACTACTGGGCCAAGACTGATCTGAGTGCTGATATGGTGCC
CGTGTCAGAACCTGAGGCATTTGACGGTGCTGAAGATGACGTCGAGCCCA
TCAAGGCGGCTTTAAGAACTGAATTCGAGCACTTACTGGCTGAAGAAGAT
TCGTCAGAACCGCCGCGGAAGAAGAGGAGGTTCCAGCAGAACGTCTCGTC
TACGTCTACGCATTTGGTCTCGATATGCAAGTCTTCCAGTCGTGGGGCGT
CTGCGCTAGCAGGCGTGATCGTGGAGGACTCGGTGTTGGTTCCTGCTGGA
CGGAAGTCGCGGCTTGGAAGCTACGAGGGAATCTGCCACATCCAGTCGAG
GCCACGGCCTTGCTAACGGATGCTATCCTTCATGATGATGCCCTGAAAAA
TTCCATCTTCTCCATTCGGGCTACATACTCGGCTGCGTTCTGTCGATGGC
GAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGCGGTGC
GGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGCGCTCC
AAGGCCTGCGCCACTGATGGGTGATTCCATGACGGGCATGTTCGCTAAGT
GGGATTCATTATTGCAGATGCTCGCGGAGGGCCATCCCCCGGTCCTGGCA
TCGCTGACGGAGGAGATGGTGAATGTACTGGCCTTTTCGGGCTCAAAGAA
CGTGAAAAGCGACCCTCAGCTCGAAGGATTATACATGTGGCTGGACCATA
TACTTCAATCGCCGGAATGGGGGTCTCGAAGACGACTACTGTCCCACGCA
TATCTTCTTGCCGTTTGCGAGCAGAGTTCCAACCACTGGACGACGCTTCT
TAAGGAAAGCTTACAGCAGAGGGCGGACGATTTAGCACCTAGCAAGCAGT
CGTCCACGTCAAAGAAGCAGTCGAAGAAGGACGGATCTGGTCTCAAGCGG
ACTGCAGATGCCGACGATTTGAAAGAGTTGAAGAAATTCGGATGGGAGAC
GGTAGATACGTGGGATACGCGACCGTTAGGGATAGTATAGATTCGTGACG
GGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAAAACCATGTTCCAACG
AGCCATTGATCTGGGCCTACCGGCCTCATTTGTGGAACTGCGTCACGAGG
CGACGCATCGTGAACTGCCTTCTCTAACAGTGCTGCGCAATGCCACGCAG
CGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGCCAAGACTGATCTGAG
TGCTGATATGGTGCCCGTGTCAGAACCTGAGGCATTTGACGGTGCTGAAG
ATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACTGAATTCGAGCACTTA
CTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAAGAAGAGGAGGTTCCA
GCAGAACGTCTCGTCTACGTCTACGCATTTGGTCTCGATATGCAAGTCTT
CCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATCGTGGAGGACTCGGTG
TTGGTTCCTGCTGGACGGAAGTCGCGGCTTGGAAGCTACGAGGGAATCTG
CCACATCCAGTCGAGGCCACGGCCTTGCTAACGGATGCTATCCTTCATGA
TGATGCCCTGAAAAATTCCATCTTCTCCATTCGGGCTACATACTCGGCTG
CGTTCTGTCGATGGCGAAGGTCATTTTTACACCATGGAAGGAGCACTCGC
AATTACTCGCGGTGCGGAGTCAATTCTACCCTGCACCGTTTTATGATGGG
CCCGACATGCGCTCCAAGGCCTGCGCCACTGATGGGTGATTCCATGACGG
GCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGCGGAGGGCCAT
CCCCCGGTCCTGGCATCGCTGACGGAGGAGATGGTGAATGTACTGGCCTT
TTCGGGCTCAAAGAACGTGAAAAGCGACCCTCAGCTCGAAGGATTATACA
TGTGGCTGGACCATATACTTCAATCGCCGGAATGGGGGTCTCGAAGACGA
CTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCCAACCA
CTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGGCGGACGATTTAG
CACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGGACGGA
TCTGGTCTCAAGCGGACTGCAGATGCCGACGATTTGAAAGAGTTGAAGAA
ATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCGTTAGGGATAG
TATAGATTCGTGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAA
AACCATGTTCCAACGAGCCATTGATCTGGGCCTACCGGCCTCATTTGTGG
AACTGCGTCACGAGGCGACGCATCGTGAACTGCCTTCTCTAACAGTGCTG
CGCAATGCCACGCAGCGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGC
CAAGACTGATCTGAGTGCTGATATGGTGCCCGTGTCAGAACCTGAGGCAT
TTGACGGTGCTGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACT
GAATTCGAGCACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAA
GAAGAGGAGGTTCCAGCAGAACGTCTCGTCTACGTCTACGCATTTGGTCT
CGATATGCAAGTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATC
GTGGAGGACTCGGTGTTGGTTCCTGCTGGACGGAAGTCGCGGCTTGGAAG
CTACGAGGGAATCTGCCACATCCAGTCGAGGCCACGGCCTTGCTAACGGA
TGCTATCCTTCATGATGATGCCCTGAAAAATTCCATCTTCTCCATTCGGG
CTACATACTCGGCTGCGTTCTGTCGATGGCGAAGGTCATTTTTACACCAT
GGAAGGAGCACTCGCAATTACTCGCGGTGCGGAGTCAATTCTACCCTGCA
CCGTTTTATGATGGGCCCGACATGCGCTCCAAGGCCTGCGCCACTGATGG
GTGATTCCATGACGGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATG
CTCGCGGAGGGCCATCCCCCGGTCCTGGCATCGCTGACGGAGGAGATGGT
GAATGTACTGGCCTTTTCGGGCTCAAAGAACGTGAAAAGCGACCCTCAGC
TCGAAGGATTATACATGTGGCTGGACCATATACTTCAATCGCCGGAATGG
GGGTCTCGAAGACGACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGA
GCAGAGTTCCAACCACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGA
GGGCGGACGATTTAGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAG
TCGAAGAAGGACGGATCTGGTCTCAAGCGGACTGCAGATGCCGACGATTT
GAAAGAGTTGAAGAAATTCGGATGGGAGACGGTAGATACGTGGGATACGC
GACCGTTAGGGATAGTATAGATTCGTGACGGGGCTCGTCGACTCCAAGCT
GAACGGGCAGCGTAAAACCATGTTCCAACGAGCCATTGATCTGGGCCTAC
CGGCCTCATTTGTGGAACTGCGTCACGAGGCGACGCATCGTGAACTGCCT
TCTCTAACAGTGCTGCGCAATGCCACGCAGCGGTCCCTTGAGTGGCTGTG
GGACTACTACTGGGCCAAGACTGATCTGAGTGCTGATATGGTGCCCGTGT
CAGAACCTGAGGCATTTGACGGTGCTGAAGATGACGTCGAGCCCATCAAG
GCGGCTTTAAGAACTGAATTCGAGCACTTACTGGCTGAAGAAGATTCGTC
AGAACCGCCGCGGAAGAAGAGGAGGTTCCAGCAGAACGTCTCGTCTACGT
CTACGCATTTGGTCTCGATATGCAAGTCTTCCAGTCGTGGGGCGTCTGCG
CTAGCAGGCGTGATCGTGGAGGACTCGGTGTTGGTTCCTGCTGGACGGAA
GTCGCGGCTTGGAAGCTACGAGGGAATCTGCCACATCCAGTCGAGGCCAC
GGCCTTGCTAACGGATGCTATCCTTCATGATGATGCCCTGAAAAATTCCA
TCTTCTCCATTCGGGCTACATACTCGGCTGCGTTCTGTCGATGGCGAAGG
TCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGCGGTGCGGAGT
CAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGCGCTCCAAGGC
CTGCGCCACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0090730 | Las1 complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004519 | endonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007174 |
| DBxref | PFAM:PF04031 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:1486517..1487923 - |
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