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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1541808..1545231- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009080-T1 ID=CBS51388_009080-T1|Name=CBS51388_009080-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3424bp|location=Sequence derived from alignment at An14:1541808..1545231- (Aspergillus niger CBS 513.88)
ATGTCCTACGCTTTTGTTCGCAGAGATTGCGCTCGCCACGCATCGTACGG
CCACAATCTTCATCATTGCTAGCAAGGTATCTTGCGACGCAGTCTGCAGC
GCGTTCTACTGAGGAGACACCTAAACGGCAATCTCTTGCAGGTGGGTGGC
TCAGCTGTTTAGAGATGCGAAAGCCCTATATACTGATTTCGCAGTCCCCG
CTTCCGCTAGGTTCAACGAGATTGGAGTCCAACAATTAAGCGACCATGTC
TACTCCCAAGTATTTCTTCAGAAGACGGAACCGCCAGATCCCAACTTAGT
CGCTTTGTCAAAAGAACATCTGTCAAGGCACGATTTACTCGGAAAGTCAC
AAGATGCCGCGGATCCCATCGCCTTTGACATGCCCGCCCTTCAAGGGCAA
TCACTTGATGAGCATTTCTACAAACTGGGTATGGATGCGTCAGAGCCATA
TCTCGCCTATTCCAAACAATACACTATGGCAAACTCACCGGAGAAGCCGC
GCAAATGGATAAAACGCAGTGGGTGGACAAAGTACAACAGCGACGGGTCG
TGGGAAGCGGTTGATGCACCGAATGAGTCCATGTTGACATTCGACACCGA
AGTCATGTACAAGGAGCATTCTTTTGCTGTTATGGCTTGCGCTGTTAGTC
CTACAGCTTGGTATGCTTGGATATCGCCTTGGTTGTTAGGAGAGTCGGAA
AACGAAGTCCAGCTCATTCCCCTCGGAGACCCATCAAAGCCACGAATTGT
CGTGGGCCATAATATTGGTTATGATCGCGCTCGTGTTCTCGAGGAGTATG
ATATGACTCAGTCTTGCAACTTCTTTCTTGATACCATGTCGCTTCACGTG
GCTGTGAATGGTATGTGTTCACAACAGAGGCCTACCTGGATGCGACACAA
GAAGAATAGGGATTTGAGAAATAAGATCGCAAGTGAGAGTAATTCAGTTG
AGCTGGCAGCCATACTAGAAAGTAAGATGCTCAGTGATGAGGAAGAAGAA
CTCTGGGTAGGGAGGAGCTCGGTGAATTCGCTTCGCGACGTGGCCAAGTT
TCATTGTGATGTTACGATCGATAAGGCGCAACGTGACTATTTCGGTGAAC
TTGACAGAAATGGAATCCTGGGGAAGTTGGAGGAACTGCTTGATTATTGT
GCAGCAGATGTTGCCATTACCCATCGAGTGTACAAGAAGGTTTTCCCTAA
CTTCCTTGAAGTCTGTCCGCACCCTGTCAGCTTTGGCGCCCTTCGACATC
TCTCTTCCGTCATCTTGCCAGTGAACGAGACATGGAAGGAGTACATCGCC
AATGCGGAAGCGACCTATCACCAGCGCCTTGAGGATGTTCAACGGAAAAT
GATCGAACTTTGTGAGGAAGCCCTGAAGGTCAAAGACTCTCCGGACATCT
ACATGAACGATCCCTGGCTGCGGCAGTTGGACTGGTCTGGCCAGGAGGTG
AAGATGGTCAAAGGAAAAAAGAAAGGCGACCCTCCGCGACCAGCTGCCAG
GCAGAAGAAGCCGGGTATGCCGAAGTGGTATAAAGATCTGTTTGCCACCA
ACACATCGGACATCAGCTTATCTGTGCGTACTCGTATCGCGCCTATACTT
CTCAAACTGTCATGGGACGGTTACCCTTTGACATGGTCCGATAAGTATGG
GTGGACTTTCAAAGTCCCGCGCGAGCTTGTCAAGAATTATGAGAACCAGC
CTGTCGTTCTGTGTGACATGTCCGAGGAGAAGAACCCCGAATTGCAGAAT
GACAGAAAACACGTTTACTTCAAGCTACCGCACAAAGATGGGCCTCAAGC
GCGGTGCACAAATCCTCTGGCGAAGGGGTACATGCAGTACTTTGAACGTG
GAACGCTCTCATCCCAGTACGCCCTCGCCAAAGAGGCGCTAGAGATGAAT
GCATCCTGCTCTTACTGGATCAGTGCCCGTGACCGTATCATGGGTCAAAT
GGTAGTCTACGAGGACGAAGTGCGAGGCCTGACATCGAGTGGTAAGACAG
ACCACCGGCTCGGGTTCATTTTGCCACAGATCATCCCTATGGGAACCATC
ACTCGAAGAGCGGTGGAAAACACATGGCTTACAGCCAGTAATGCAAAAGG
GAACCGTGTCGGGTCTGAGCTCAAGGCTATGATCAAAGCTCCACCTGGCT
ACTCTTTTGTCGGCGCAGATGTCGACTCTCAGGAGCTATGGATTGCCAGT
CTTGTTGGAGACGCTCAATTCCAAATTCACGGCGGTAACGCCATTGGTTT
CATGACACTGGAAGGGTCCAAGGCAGCGGGGACGGATATGCACTCACGCA
CAGCCCAGATCCTGGGTATCTCACGTAACGATGCCAAGGTGTTCAACTAT
GGACGCATCTATGGAGCTGGCGTCAAGTTCGCCGCTACTTTGCTGCGTCA
GTTCAATCCGTCCATGTCGGAAAGGCAGACCCAGGAGGTTGCAACAAAAT
TATATAAAGAGACGAAGGGTACCCGTACGACTCGTCGTATACTCTGTGAA
GGCCCTTTCTGGCGGGGCGGAACCGAGTCGTTCGTCTTCAACAAACTAGA
AGAATTCGCTGAGCAAGAGAGGCCCAGAACACCCACTTTAGGGGCCGGAA
TTACTGAAGCGCTGATGCGGCGCTTCATCAACAAGGGAAGCTTCATGACA
TCAAGAATCAACTGGGCCATTCAGTCGTCTGGCGTTGATTACCTCCATCT
CTTAATTGTCGCCATGGACTACCTCATTCGTCGCTTCAACATCGCCGCTC
GTCTAGCAATCACTGTCCACGACGAAATCAGGTACCTAGTTAAAGACGAA
GACAAGTATCGAGCTGCGCTGGCTTTGCAGGTTGCCAACGTGTGGACCCG
CGCGATGTTCTCTCAGCAAGTCGGAATAAACGACCTTCCTCAGTCCTGCG
CCTACTTCTCTGCTGTGGACATTGACCACGTCCTGCGGAAGGAGGTTGAT
ATGGACTGCGTGACCCCATCCCACCCGCACAAGATTCCCCACGGCGAGAG
TCTTGACGTTGCGCAGCTTTTGGACAAGAATGAAAAGGCATACCTTGACC
CTGCCATCATCCCCAATTCGCCACCCAACCCCCAGCAGTACGAGTACACG
CCACGACCGTCAGTCATGTCCGCACTTCAAACTTCTCACCCGGCCTTCAT
CCGCGCTCAGATCTCGAAGGACGACAACGAACTCCGCGAAATCATCAAAG
AGCTCACTAAACAAAAGTCCACACTGGCGCCACCAAACGCGCGTTTGCCT
AGCAATCGTGCAAAACCCTATGGCTCGGTGGCAGCGGAACCACAAAAGGC
CATTCTGATGGACATTGGACCCAGTCTCTACCCAGACTTTAAAAGCCTTC
CCCAAGGGAGCCGGTCTCCCCAGGTGAGCTTTAACCGTCAGAACTGGAAG
CCGAGACCGTCTGCCCGAGCTTAG back to topCoding sequence (CDS) from alignment at An14:1541808..1545231- >CBS51388_009080-T1 ID=CBS51388_009080-T1|Name=CBS51388_009080-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6654bp|location=Sequence derived from alignment at An14:1541808..1545231- (Aspergillus niger CBS 513.88)
GTGGGTGGCTCAGCTGTTTAGAGATGCGAAAGCCCTATATACTGATTTCG
CAGTCCCCGCTTCCGCTAGGTTCAACGAGATTGGAGTCCAACAATTAAGC
GACCATGTCTACTCCCAAGTATTTCTTCAGAAGACGGAACCGCCAGATCC
CAACTTAGTCGCTTTGTCAAAAGAACATCTGTCAAGGCACGATTTACTCG
GAAAGTCACAAGATGCCGCGGATCCCATCGCCTTTGACATGCCCGCCCTT
CAAGGGCAATCACTTGATGAGCATTTCTACAAACTGGGTATGGATGCGTC
AGAGCCATATCTCGCCTATTCCAAACAATACACTATGGCAAACTCACCGG
AGAAGCCGCGCAAATGGATAAAACGCAGTGGGTGGACAAAGTACAACAGC
GACGGGTCGTGGGAAGCGGTTGATGCACCGAATGAGTCCATGTTGACATT
CGACACCGAAGTCATGTACAAGGAGCATTCTTTTGCTGTTATGGCTTGCG
CTGTTAGTCCTACAGCTTGGTATGCTTGGATATCGCCTTGGTTGTTAGGA
GAGTCGGAAAACGAAGTCCAGCTCATTCCCCTCGGAGACCCATCAAAGCC
ACGAATTGTCGTGGGCCATAATATTGGTTATGATCGCGCTCGTGTTCTCG
AGGAGTATGATATGACTCAGTCTTGCAACTTCTTTCTTGATACCATGTCG
CTTCACGTGGCTGTGAATGGTATGTGTTCACAACAGAGGCCTACCTGGAT
GCGACACAAGAAGAATAGGGATTTGAGAAATAAGATCGCAAGTGAGAGTA
ATTCAGTTGAGCTGGCAGCCATACTAGAAAGTAAGATGCTCAGTGATGAG
GAAGAAGAACTCTGGGTAGGGAGGAGCTCGGTGAATTCGCTTCGCGACGT
GGCCAAGTTTCATTGTGATGTTACGATCGATAAGGCGCAACGTGACTATT
TCGGTGAACTTGACAGAAATGGAATCCTGGGGAAGTTGGAGGAACTGCTT
GATTATTGTGCAGCAGATGTTGCCATTACCCATCGAGTGTACAAGAAGGT
TTTCCCTAACTTCCTTGAAGTCTGTCCGCACCCTGTCAGCTTTGGCGCCC
TTCGACATCTCTCTTCCGTCATCTTGCCAGTGAACGAGACATGGAAGGAG
TACATCGCCAATGCGGAAGCGACCTATCACCAGCGCCTTGAGGATGTTCA
ACGGAAAATGATCGAACTTTGTGAGGAAGCCCTGAAGGTCAAAGACTCTC
CGGACATCTACATGAACGATCCCTGGCTGCGGCAGTTGGACTGGTCTGGC
CAGGAGGTGAAGATGGTCAAAGGAAAAAAGAAAGGCGACCCTCCGCGACC
AGCTGCCAGGCAGAAGAAGCCGGGTATGCCGAAGTGGTATAAAGATCTGT
TTGCCACCAACACATCGGACATCAGCTTATCTGTGCGTACTCGTATCGCG
CCTATACTTCTCAAACTGTCATGGGACGGTTACCCTTTGACATGGTCCGA
TAAGTATGGGTGGACTTTCAAAGTCCCGCGCGAGCTTGTCAAGAATTATG
AGAACCAGCCTGTCGTTCTGTGTGACATGTCCGAGGAGAAGAACCCCGAA
TTGCAGAATGACAGAAAACACGTTTACTTCAAGCTACCGCACAAAGATGG
GCCTCAAGCGCGGTGCACAAATCCTCTGGCGAAGGGGTACATGCAGTACT
TTGAACGTGGAACGCTCTCATCCCAGTACGCCCTCGCCAAAGAGGCGCTA
GAGATGAATGCATCCTGCTCTTACTGGATCAGTGCCCGTGACCGTATCAT
GGGTCAAATGGTAGTCTACGAGGACGAAGTGCGAGGCCTGACATCGAGTG
GTAAGACAGACCACCGGCTCGGGTTCATTTTGCCACAGATCATCCCTATG
GGAACCATCACTCGAAGAGCGGTGGAAAACACATGGCTTACAGCCAGTAA
TGCAAAAGGGAACCGTGTCGGGTCTGAGCTCAAGGCTATGATCAAAGCTC
CACCTGGCTACTCTTTTGTCGGCGCAGATGTCGACTCTCAGGAGCTATGG
ATTGCCAGTCTTGTTGGAGACGCTCAATTCCAAATTCACGGCGGTAACGC
CATTGGTTTCATGACACTGGAAGGGTCCAAGGCAGCGGGGACGGATATGC
ACTCACGCACAGCCCAGATCCTGGGTATCTCACGTAACGATGCCAAGGTG
TTCAACTATGGACGCATCTATGGAGCTGGCGTCAAGTTCGCCGCTACTTT
GCTGCGTCAGTTCAATCCGTCCATGTCGGAAAGGCAGACCCAGGAGGTTG
CAACAAAATTATATAAAGAGACGAAGGGTACCCGTACGACTCGTCGTATA
CTCTGTGAAGGCCCTTTCTGGCGGGGCGGAACCGAGTCGTTCGTCTTCAA
CAAACTAGAAGAATTCGCTGAGCAAGAGAGGCCCAGAACACCCACTTTAG
GGGCCGGAATTACTGAAGCGCTGATGCGGCGCTTCATCAACAAGGGAAGC
TTCATGACATCAAGAATCAACTGGGCCATTCAGTCGTCTGGCGTTGATTA
CCTCCATCTCTTAATTGTCGCCATGGACTACCTCATTCGTCGCTTCAACA
TCGCCGCTCGTCTAGCAATCACTGTCCACGACGAAATCAGGTACCTAGTT
AAAGACGAAGACAAGTATCGAGCTGCGCTGGCTTTGCAGGTTGCCAACGT
GTGGACCCGCGCGATGTTCTCTCAGCAAGTCGGAATAAACGACCTTCCTC
AGTCCTGCGCCTACTTCTCTGCTGTGGACATTGACCACGTCCTGCGGAAG
GAGGTTGATATGGACTGCGTGACCCCATCCCACCCGCACAAGATTCCCCA
CGGCGAGAGTCTTGACGTTGCGCAGCTTTTGGACAAGAATGAAAAGGCAT
ACCTTGACCCTGCCATCATCCCCAATTCGCCACCCAACCCCCAGCAGTAC
GAGTACACGCCACGACCGTCAGTCATGTCCGCACTTCAAACTTCTCACCC
GGCCTTCATCCGCGCTCAGATCTCGAAGGACGACAACGAACTCCGCGAAA
TCATCAAAGAGCTCACTAAACAAAAGTCCACACTGGCGCCACCAAACGCG
CGTTTGCCTAGCAATCGTGCAAAACCCTATGGCTCGGTGGCAGCGGAACC
ACAAAAGGCCATTCTGATGGACATTGGACCCAGTCTCTACCCAGACTTTA
AAAGCCTTCCCCAAGGGAGCCGGTCTCCCCAGGTGAGCTTTAACCGTCAG
AACTGGAAGCCGAGACCGTCTGCCCGAGCTTAGATGTCCTACGCTTTTGT
TCGCAGAGATTGCGCTCGCCACGCATCGTGGGTGGCTCAGCTGTTTAGAG
ATGCGAAAGCCCTATATACTGATTTCGCAGTCCCCGCTTCCGCTAGGTTC
AACGAGATTGGAGTCCAACAATTAAGCGACCATGTCTACTCCCAAGTATT
TCTTCAGAAGACGGAACCGCCAGATCCCAACTTAGTCGCTTTGTCAAAAG
AACATCTGTCAAGGCACGATTTACTCGGAAAGTCACAAGATGCCGCGGAT
CCCATCGCCTTTGACATGCCCGCCCTTCAAGGGCAATCACTTGATGAGCA
TTTCTACAAACTGGGTATGGATGCGTCAGAGCCATATCTCGCCTATTCCA
AACAATACACTATGGCAAACTCACCGGAGAAGCCGCGCAAATGGATAAAA
CGCAGTGGGTGGACAAAGTACAACAGCGACGGGTCGTGGGAAGCGGTTGA
TGCACCGAATGAGTCCATGTTGACATTCGACACCGAAGTCATGTACAAGG
AGCATTCTTTTGCTGTTATGGCTTGCGCTGTTAGTCCTACAGCTTGGTAT
GCTTGGATATCGCCTTGGTTGTTAGGAGAGTCGGAAAACGAAGTCCAGCT
CATTCCCCTCGGAGACCCATCAAAGCCACGAATTGTCGTGGGCCATAATA
TTGGTTATGATCGCGCTCGTGTTCTCGAGGAGTATGATATGACTCAGTCT
TGCAACTTCTTTCTTGATACCATGTCGCTTCACGTGGCTGTGAATGGTAT
GTGTTCACAACAGAGGCCTACCTGGATGCGACACAAGAAGAATAGGGATT
TGAGAAATAAGATCGCAAGTGAGAGTAATTCAGTTGAGCTGGCAGCCATA
CTAGAAAGTAAGATGCTCAGTGATGAGGAAGAAGAACTCTGGGTAGGGAG
GAGCTCGGTGAATTCGCTTCGCGACGTGGCCAAGTTTCATTGTGATGTTA
CGATCGATAAGGCGCAACGTGACTATTTCGGTGAACTTGACAGAAATGGA
ATCCTGGGGAAGTTGGAGGAACTGCTTGATTATTGTGCAGCAGATGTTGC
CATTACCCATCGAGTGTACAAGAAGGTTTTCCCTAACTTCCTTGAAGTCT
GTCCGCACCCTGTCAGCTTTGGCGCCCTTCGACATCTCTCTTCCGTCATC
TTGCCAGTGAACGAGACATGGAAGGAGTACATCGCCAATGCGGAAGCGAC
CTATCACCAGCGCCTTGAGGATGTTCAACGGAAAATGATCGAACTTTGTG
AGGAAGCCCTGAAGGTCAAAGACTCTCCGGACATCTACATGAACGATCCC
TGGCTGCGGCAGTTGGACTGGTCTGGCCAGGAGGTGAAGATGGTCAAAGG
AAAAAAGAAAGGCGACCCTCCGCGACCAGCTGCCAGGCAGAAGAAGCCGG
GTATGCCGAAGTGGTATAAAGATCTGTTTGCCACCAACACATCGGACATC
AGCTTATCTGTGCGTACTCGTATCGCGCCTATACTTCTCAAACTGTCATG
GGACGGTTACCCTTTGACATGGTCCGATAAGTATGGGTGGACTTTCAAAG
TCCCGCGCGAGCTTGTCAAGAATTATGAGAACCAGCCTGTCGTTCTGTGT
GACATGTCCGAGGAGAAGAACCCCGAATTGCAGAATGACAGAAAACACGT
TTACTTCAAGCTACCGCACAAAGATGGGCCTCAAGCGCGGTGCACAAATC
CTCTGGCGAAGGGGTACATGCAGTACTTTGAACGTGGAACGCTCTCATCC
CAGTACGCCCTCGCCAAAGAGGCGCTAGAGATGAATGCATCCTGCTCTTA
CTGGATCAGTGCCCGTGACCGTATCATGGGTCAAATGGTAGTCTACGAGG
ACGAAGTGCGAGGCCTGACATCGAGTGGTAAGACAGACCACCGGCTCGGG
TTCATTTTGCCACAGATCATCCCTATGGGAACCATCACTCGAAGAGCGGT
GGAAAACACATGGCTTACAGCCAGTAATGCAAAAGGGAACCGTGTCGGGT
CTGAGCTCAAGGCTATGATCAAAGCTCCACCTGGCTACTCTTTTGTCGGC
GCAGATGTCGACTCTCAGGAGCTATGGATTGCCAGTCTTGTTGGAGACGC
TCAATTCCAAATTCACGGCGGTAACGCCATTGGTTTCATGACACTGGAAG
GGTCCAAGGCAGCGGGGACGGATATGCACTCACGCACAGCCCAGATCCTG
GGTATCTCACGTAACGATGCCAAGGTGTTCAACTATGGACGCATCTATGG
AGCTGGCGTCAAGTTCGCCGCTACTTTGCTGCGTCAGTTCAATCCGTCCA
TGTCGGAAAGGCAGACCCAGGAGGTTGCAACAAAATTATATAAAGAGACG
AAGGGTACCCGTACGACTCGTCGTATACTCTGTGAAGGCCCTTTCTGGCG
GGGCGGAACCGAGTCGTTCGTCTTCAACAAACTAGAAGAATTCGCTGAGC
AAGAGAGGCCCAGAACACCCACTTTAGGGGCCGGAATTACTGAAGCGCTG
ATGCGGCGCTTCATCAACAAGGGAAGCTTCATGACATCAAGAATCAACTG
GGCCATTCAGTCGTCTGGCGTTGATTACCTCCATCTCTTAATTGTCGCCA
TGGACTACCTCATTCGTCGCTTCAACATCGCCGCTCGTCTAGCAATCACT
GTCCACGACGAAATCAGGTACCTAGTTAAAGACGAAGACAAGTATCGAGC
TGCGCTGGCTTTGCAGGTTGCCAACGTGTGGACCCGCGCGATGTTCTCTC
AGCAAGTCGGAATAAACGACCTTCCTCAGTCCTGCGCCTACTTCTCTGCT
GTGGACATTGACCACGTCCTGCGGAAGGAGGTTGATATGGACTGCGTGAC
CCCATCCCACCCGCACAAGATTCCCCACGGCGAGAGTCTTGACGTTGCGC
AGCTTTTGGACAAGAATGAAAAGGCATACCTTGACCCTGCCATCATCCCC
AATTCGCCACCCAACCCCCAGCAGTACGAGTACACGCCACGACCGTCAGT
CATGTCCGCACTTCAAACTTCTCACCCGGCCTTCATCCGCGCTCAGATCT
CGAAGGACGACAACGAACTCCGCGAAATCATCAAAGAGCTCACTAAACAA
AAGTCCACACTGGCGCCACCAAACGCGCGTTTGCCTAGCAATCGTGCAAA
ACCCTATGGCTCGGTGGCAGCGGAACCACAAAAGGCCATTCTGATGGACA
TTGGACCCAGTCTCTACCCAGACTTTAAAAGCCTTCCCCAAGGGAGCCGG
TCTCCCCAGGTGAGCTTTAACCGTCAGAACTGGAAGCCGAGACCGTCTGC
CCGAGCTTAGATGTCCTACGCTTTTGTTCGCAGAGATTGCGCTCGCCACG
CATC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005760 | gamma DNA polymerase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003887 | DNA-directed DNA polymerase activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092603KJ |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR043502 |
| DBxref | InterPro:IPR019760 |
| DBxref | InterPro:IPR041336 |
| DBxref | InterPro:IPR001098 |
| DBxref | InterPro:IPR002297 |
| DBxref | PFAM:PF00476 |
| DBxref | PFAM:PF18136 |
| Product | DNA-directed DNA polymerase gamma mip1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:1541808..1545231 - |
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