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CBS51388_009103-T1, CBS51388_009103-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009103-T1
Unique NameCBS51388_009103-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1604173..1605344-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009103-T1 ID=CBS51388_009103-T1|Name=CBS51388_009103-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1172bp|location=Sequence derived from alignment at An14:1604173..1605344- (Aspergillus niger CBS 513.88)
ATGCCCGGAAAAGAGTTACCTGATCGCTGCATGAATTGTCATGAGGCTGA
ACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGCCAGTACGTCTCGCCCC
AAAGTACACCTGTTGCCGCTACTAGTCCATACTGATCTCAGTTACCCCTC
CATCCAGAGAATGTTATATTCGATTCTTGAACTTCAAGCCATTCAGGCGC
ATGGAACGGTATCGTCTCCGGAGGAATATGCCACAGACCGGTCCCTGCAA
ATTGCTGCTCCCCCTTTCGTACGGCGTCTCCTCCACTGTGCTATTGCACA
TGCTGCACCGGCAGTTGGAGGCACTACGCTCAAAAAAACATGGTCCCGCG
GGCTTCGAAATCCTCGTCCTCGTCGTTGAGCCTTCGACAATCTCCCCCGT
TCCTCCGCACGAAGAAGGCTTTGCACTCGCGCAGCAGACCTTCCCGCTCT
GTTCCTTCACCCGGCTCCCCTTCCACAGTATCTTCGAGCTTGACCCGGAT
GTCCATCAAATCATGTCGCAGTATGCCGGGGAGCACTTCACAGATGACAC
TTCGCTGTCCGATGAGGAGCGTTTGAATCGCTTCCGCAGGTCGATTACAA
CAGCCACATCCAAGTCCGATGTCGACCAAATTTTGTTGAACAAACTTGTC
GTTGCTTTCGCAAAGAAAATGGAATGCCGCGGCATAGTATGGGGTGACTC
GGATAGCAAGCTCGCTGCAAAGACCCTCGCCAACGTCGCGAAAGGACGCG
GCTCTGCAGTGACGTGGCAGGTGTGCGATGGAATGTCGCCTTTTGGCCTA
GAATTCAACTTCCCGCTTCGGGACGTGTTCACGGCAGAGATACGCACCTA
TGCCACCCTCTTTCCCGAGCTGGCTGGCATCATCGTTCATGACGAGCCTC
CCTCAGAGAATACGCTTACCAAGAATCTGTCGATCGATGAGCTGATGATC
CGTTATGTCAGCACTCAGGGTGAGAAATACCCCGGCGTCATGTTGAACGT
AACTAGGACTGCCAGTAAGCTCCAGTCGTCTGGTACATCTATCGGCGGAC
TGCAGTGCAATTTCTGCGGGGCCTTCATGACTACAAATGAGAATATCACG
GGCGAACAAGGCAACGAACAGCTTCAATTCTGCTATGCCTGTGCTCGGTC
CCAACCCGAATTGAGCTGTTAA
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Coding sequence (CDS) from alignment at An14:1604173..1605344-

>CBS51388_009103-T1 ID=CBS51388_009103-T1|Name=CBS51388_009103-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2202bp|location=Sequence derived from alignment at An14:1604173..1605344- (Aspergillus niger CBS 513.88)
AGAATGTTATATTCGATTCTTGAACTTCAAGCCATTCAGGCGCATGGAAC
GGTATCGTCTCCGGAGGAATATGCCACAGACCGGTCCCTGCAAATTGCTG
CTCCCCCTTTCGTACGGCGTCTCCTCCACTGTGCTATTGCACATGCTGCA
CCGGCAGTTGGAGGCACTACGCTCAAAAAAACATGGTCCCGCGGGCTTCG
AAATCCTCGTCCTCGTCGTTGAGCCTTCGACAATCTCCCCCGTTCCTCCG
CACGAAGAAGGCTTTGCACTCGCGCAGCAGACCTTCCCGCTCTGTTCCTT
CACCCGGCTCCCCTTCCACAGTATCTTCGAGCTTGACCCGGATGTCCATC
AAATCATGTCGCAGTATGCCGGGGAGCACTTCACAGATGACACTTCGCTG
TCCGATGAGGAGCGTTTGAATCGCTTCCGCAGGTCGATTACAACAGCCAC
ATCCAAGTCCGATGTCGACCAAATTTTGTTGAACAAACTTGTCGTTGCTT
TCGCAAAGAAAATGGAATGCCGCGGCATAGTATGGGGTGACTCGGATAGC
AAGCTCGCTGCAAAGACCCTCGCCAACGTCGCGAAAGGACGCGGCTCTGC
AGTGACGTGGCAGGTGTGCGATGGAATGTCGCCTTTTGGCCTAGAATTCA
ACTTCCCGCTTCGGGACGTGTTCACGGCAGAGATACGCACCTATGCCACC
CTCTTTCCCGAGCTGGCTGGCATCATCGTTCATGACGAGCCTCCCTCAGA
GAATACGCTTACCAAGAATCTGTCGATCGATGAGCTGATGATCCGTTATG
TCAGCACTCAGGGTGAGAAATACCCCGGCGTCATGTTGAACGTAACTAGG
ACTGCCAGTAAGCTCCAGTCGTCTGGTACATCTATCGGCGGACTGCAGTG
CAATTTCTGCGGGGCCTTCATGACTACAAATGAGAATATCACGGGCGAAC
AAGGCAACGAACAGCTTCAATTCTGCTATGCCTGTGCTCGGTCCCAACCC
GAATTGAGCTGTTAAATGCCCGGAAAAGAGTTACCTGATCGCTGCATGAA
TTGTCATGAGGCTGAACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGCC
AAGAATGTTATATTCGATTCTTGAACTTCAAGCCATTCAGGCGCATGGAA
CGGTATCGTCTCCGGAGGAATATGCCACAGACCGGTCCCTGCAAATTGCT
GCTCCCCCTTTCGTACGGCGTCTCCTCCACTGTGCTATTGCACATGCTGC
ACCGGCAGTTGGAGGCACTACGCTCAAAAAAACATGGTCCCGCGGGCTTC
GAAATCCTCGTCCTCGTCGTTGAGCCTTCGACAATCTCCCCCGTTCCTCC
GCACGAAGAAGGCTTTGCACTCGCGCAGCAGACCTTCCCGCTCTGTTCCT
TCACCCGGCTCCCCTTCCACAGTATCTTCGAGCTTGACCCGGATGTCCAT
CAAATCATGTCGCAGTATGCCGGGGAGCACTTCACAGATGACACTTCGCT
GTCCGATGAGGAGCGTTTGAATCGCTTCCGCAGGTCGATTACAACAGCCA
CATCCAAGTCCGATGTCGACCAAATTTTGTTGAACAAACTTGTCGTTGCT
TTCGCAAAGAAAATGGAATGCCGCGGCATAGTATGGGGTGACTCGGATAG
CAAGCTCGCTGCAAAGACCCTCGCCAACGTCGCGAAAGGACGCGGCTCTG
CAGTGACGTGGCAGGTGTGCGATGGAATGTCGCCTTTTGGCCTAGAATTC
AACTTCCCGCTTCGGGACGTGTTCACGGCAGAGATACGCACCTATGCCAC
CCTCTTTCCCGAGCTGGCTGGCATCATCGTTCATGACGAGCCTCCCTCAG
AGAATACGCTTACCAAGAATCTGTCGATCGATGAGCTGATGATCCGTTAT
GTCAGCACTCAGGGTGAGAAATACCCCGGCGTCATGTTGAACGTAACTAG
GACTGCCAGTAAGCTCCAGTCGTCTGGTACATCTATCGGCGGACTGCAGT
GCAATTTCTGCGGGGCCTTCATGACTACAAATGAGAATATCACGGGCGAA
CAAGGCAACGAACAGCTTCAATTCTGCTATGCCTGTGCTCGGTCCCAACC
CGAATTGAGCTGTTAAATGCCCGGAAAAGAGTTACCTGATCGCTGCATGA
ATTGTCATGAGGCTGAACCGGCCTTTCTATTGCGCGAGCGTCATGTCTGC
CA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
GO:0034227tRNA thio-modification
Vocabulary: Molecular Function
TermDefinition
GO:0000049tRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCS2CBS51388_009103Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009103-T1CBS51388_009103-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009103-T1.cdsCBS51388_009103-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009103-T1.exon2CBS51388_009103-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009103-T1.exon1CBS51388_009103-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR019407
DBxrefInterPro:IPR014729
Productcytoplasmic tRNA 2-thiolation protein 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1604173..1605344 -
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