You are here

CBS51388_009105-T1, CBS51388_009105-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009105-T1
Unique NameCBS51388_009105-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1608999..1610588+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009105-T1 ID=CBS51388_009105-T1|Name=CBS51388_009105-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1590bp|location=Sequence derived from alignment at An14:1608999..1610588+ (Aspergillus niger CBS 513.88)
ATGGCACACCCCGAAAACCAAACCGACGACCTCACCTCTAAGGAGGTCTC TCCCTTCCAAACCAGTCGAGAGCTATCAGCATCCCTCCTCGCGCGATGCC GATCCCTTCTCTCCGAGATAAGCGACTTCCAGACCCTGCTGGTGGAAACC CAACGCAATCCTCAGATCGTGGAGGTGCGGTCGCTGAAATCAAATGTGCT TTCAGAGCTGCGCACGTTGGAGAAGCTCGACGCGCAGGTCCAGAAGCTGC CGGACCCGACGAAGAGCGATGGGGTTGATGCAGATTCAGGTGACGATGAT GAACCAACGGCTAGGAGACTGGTTCATACGTTGAAGTCCTCCAATTTGCC GTTTTATGAGGCCGTTTGGGCCATTGCGAAGAATACTTGCCGCGGGTTGG TGGCTTTTGGGAAGAGGTTCTATTGGGGGGATGATAATGGTGTTTCGGAG GAGAAAAGGTCCGGGAAGGATAAGAAGAAGAGTGTGTTTGTGGATATTAT TGCTGATGATGGGGAGGAGTGGGTTAAGGTGTCTACGGTTGCAGAGTCGA GGTTGTTGTTTGAGATGGCGGAGAAGGGGTGGGAGGCTGGTTCTGAGTCT GAGGAGGAGGGGGAGGCTAGGACGGTTCTACGGAATCATGATGGGGATTG TGATGAGGTGGACGATGAGGATGAGGATGAAATTGAGCTGGTGAAGTTGG CTAAAGATTTGAGGAACGCGGCCAATGCTACGAGAGTCAGGTATAAACAT CCTCGGCTGCGGTTTGTGGCGCCTAGGATCCACGAGGGAAGCTGTGCGGA GATTGACGATCTTTTGAAGATTATTAGAAGCTATGGGATCAGAGTGGATT GCGGTGAAAAGGCATATGCTGTGGCTGGTACACAGGCACAGGAGGGCTTA TCGCATCTCCTTCCTAAGCCGTTCAAACACTTTACTTCCACTATTAATGT GGACTGCACATTGATGCTTGCTGCGGTCTCCGATCTCTCGCATTACAAAC ATATCACGGAATCTCCGCAGCATCATAAGGCCATCAATCGACAGATCGCT GTTGAGCATGAGCGACCTTTGTTGCCCACTGAGCTGTGGCCCGCAATGGA TGCCTATGAACTAGTGTGTGTGGAGGAGGCTGCCACACGGATGAAAGAGA TCGTCAATATTATCGGCACTGACACTGAAAGGCTGCGCATGGAAATCCTG CTCGGCGAGCCCCCCTTCGATACCTATAGCCGAGAGGACCTCATCAAGAA ATACCAGGAGTTGTCCGATTATGAAATACCGGCGCACTGGAAAATTCCGG TCAAGACGGTCGAAGCGAAGTCGGTGATTGCGTCTGCGAGAGATACTGCA AAGCTGCCGCCTGTCTATCAGAAGGTGGCTGAGAACCTCTCCGATATCAA CTATGGTGTGTTTCTGTACGGATGGGCTGCGGGACTGGCGACGATCTCCA GCAATCGGACCGTGGTCAAGGAGATTGAGTCCATTATCGAGAAGCACAGA GATGGGGATGACGGCTTGGAGGGACCTCTTATCTGGGTGTGTGATACTGC CAGGAGCTTGATAGGCAAAGAAAAGGGTCGGAAGAACTAG
back to top

Coding sequence (CDS) from alignment at An14:1608999..1610588+

>CBS51388_009105-T1 ID=CBS51388_009105-T1|Name=CBS51388_009105-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1590bp|location=Sequence derived from alignment at An14:1608999..1610588+ (Aspergillus niger CBS 513.88)
ATGGCACACCCCGAAAACCAAACCGACGACCTCACCTCTAAGGAGGTCTC
TCCCTTCCAAACCAGTCGAGAGCTATCAGCATCCCTCCTCGCGCGATGCC
GATCCCTTCTCTCCGAGATAAGCGACTTCCAGACCCTGCTGGTGGAAACC
CAACGCAATCCTCAGATCGTGGAGGTGCGGTCGCTGAAATCAAATGTGCT
TTCAGAGCTGCGCACGTTGGAGAAGCTCGACGCGCAGGTCCAGAAGCTGC
CGGACCCGACGAAGAGCGATGGGGTTGATGCAGATTCAGGTGACGATGAT
GAACCAACGGCTAGGAGACTGGTTCATACGTTGAAGTCCTCCAATTTGCC
GTTTTATGAGGCCGTTTGGGCCATTGCGAAGAATACTTGCCGCGGGTTGG
TGGCTTTTGGGAAGAGGTTCTATTGGGGGGATGATAATGGTGTTTCGGAG
GAGAAAAGGTCCGGGAAGGATAAGAAGAAGAGTGTGTTTGTGGATATTAT
TGCTGATGATGGGGAGGAGTGGGTTAAGGTGTCTACGGTTGCAGAGTCGA
GGTTGTTGTTTGAGATGGCGGAGAAGGGGTGGGAGGCTGGTTCTGAGTCT
GAGGAGGAGGGGGAGGCTAGGACGGTTCTACGGAATCATGATGGGGATTG
TGATGAGGTGGACGATGAGGATGAGGATGAAATTGAGCTGGTGAAGTTGG
CTAAAGATTTGAGGAACGCGGCCAATGCTACGAGAGTCAGGTATAAACAT
CCTCGGCTGCGGTTTGTGGCGCCTAGGATCCACGAGGGAAGCTGTGCGGA
GATTGACGATCTTTTGAAGATTATTAGAAGCTATGGGATCAGAGTGGATT
GCGGTGAAAAGGCATATGCTGTGGCTGGTACACAGGCACAGGAGGGCTTA
TCGCATCTCCTTCCTAAGCCGTTCAAACACTTTACTTCCACTATTAATGT
GGACTGCACATTGATGCTTGCTGCGGTCTCCGATCTCTCGCATTACAAAC
ATATCACGGAATCTCCGCAGCATCATAAGGCCATCAATCGACAGATCGCT
GTTGAGCATGAGCGACCTTTGTTGCCCACTGAGCTGTGGCCCGCAATGGA
TGCCTATGAACTAGTGTGTGTGGAGGAGGCTGCCACACGGATGAAAGAGA
TCGTCAATATTATCGGCACTGACACTGAAAGGCTGCGCATGGAAATCCTG
CTCGGCGAGCCCCCCTTCGATACCTATAGCCGAGAGGACCTCATCAAGAA
ATACCAGGAGTTGTCCGATTATGAAATACCGGCGCACTGGAAAATTCCGG
TCAAGACGGTCGAAGCGAAGTCGGTGATTGCGTCTGCGAGAGATACTGCA
AAGCTGCCGCCTGTCTATCAGAAGGTGGCTGAGAACCTCTCCGATATCAA
CTATGGTGTGTTTCTGTACGGATGGGCTGCGGGACTGGCGACGATCTCCA
GCAATCGGACCGTGGTCAAGGAGATTGAGTCCATTATCGAGAAGCACAGA
GATGGGGATGACGGCTTGGAGGGACCTCTTATCTGGGTGTGTGATACTGC
CAGGAGCTTGATAGGCAAAGAAAAGGGTCGGAAGAACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009105CBS51388_009105Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009105-T1.exon1CBS51388_009105-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009105-T1.cdsCBS51388_009105-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009105-T1CBS51388_009105-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010733
DBxrefPFAM:PF07000
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1608999..1610588 +