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CBS51388_009106-T1, CBS51388_009106-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009106-T1
Unique NameCBS51388_009106-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1610699..1611926-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009106-T1 ID=CBS51388_009106-T1|Name=CBS51388_009106-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1228bp|location=Sequence derived from alignment at An14:1610699..1611926- (Aspergillus niger CBS 513.88)
ATGGCTGAAGGTCAACCGCAACCGACGGCGCAACCACAGCCCCAGCAGCC
AATTCTACAATGCCAGAAGGTCTCGGACATCATTCGTAGTTTCCGTCCTA
CCAAGGTTAGTTCAATGGCCCTTATGGACCGGGCCAGCCATCTAATCGTC
TGTTTCTCCAACCATAGGCATTCCGAGGCCCAAAGCAGGATACCTCTAAT
TATGTGACGTCGCTGGACTTTGATGACCAAGGAGATTACTTGGTGGCATC
GGGTGATGATGAGACTATCCAGGTTTTCGATATCAAGGAGGGCAAGTCTA
CAAAGTCGGTTCCCAGCAAGAAGTACGGCGCCCATCTAGCCAGGTTCACC
CACCACAGTCGTCAGGTCCTCCATGCGAGCACCAAGGTTGACGGTATGTC
TGCTCCAGCGCGCCGCCATCCTTACCCTCTGTTCTGACCGGCCTAGATTC
ATTGCGCTTGTTGGACCTTCACAATGAAGGCTACATTCGCTACTTCCAGG
GTCACACCGACAAAGTCACCTGTTTAGCTCTATCTCCTGGCAGTGACTCC
TTCATCTCATGCTCCAAAGACGATACCGTTGCACTCTGGGATCTCGGCTC
TAGAAACGCGCAAGGGAAATTGAAACTTGCGACTCCATACCTCGTGGCCT
TCGACCCTTCTGCTTCTGTCATTGCCATTGCATCCCAGTCAACCGCGTCA
GTCCTTCTTTACGACCTCCGCAACTACGACAAAGCTCCGTTCTCCAGTTT
CGACCTTGCGCCGTACGAGGAACGGTATACGCCTTCTACACGAGGCAGGG
GGTGGACTCGCCTGGAATTCTCCAATGATGGCAAGCACTTGCTTGTCGGG
ACAGACTACCATGGGCATTTCATTCTCGATGCCTTCGAGGGCACCGTTAA
GGCGTTCTTGGTGGGCAAGGCCGGATCACCCGGAAGGGCTGCACCGGTAT
CAACAACCGGGAAGCCTCTCGGTCAGGGAGATGCGTGCTTCTCACCCGAC
GGGCGATACGTGGTTGGTGGTTCGGGAGATTATTCCGACATGCTAGTGTG
GGATCTACAACAATCTCCTCCAGAGCCAAACGGTCTATTGCAGCCAATGA
CTAGACTATCACATCGAGGACGGACTGCCATCGTTGAATACAATCCGAGG
TACAACATGATTGCGTCTGCCGACAAAGAGACAGTTTTCTGGCTTCCAGA
GGACCCTTCCAGATCTTCTGAAAAGTAG
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Coding sequence (CDS) from alignment at An14:1610699..1611926-

>CBS51388_009106-T1 ID=CBS51388_009106-T1|Name=CBS51388_009106-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3339bp|location=Sequence derived from alignment at An14:1610699..1611926- (Aspergillus niger CBS 513.88)
ATTCATTGCGCTTGTTGGACCTTCACAATGAAGGCTACATTCGCTACTTC
CAGGGTCACACCGACAAAGTCACCTGTTTAGCTCTATCTCCTGGCAGTGA
CTCCTTCATCTCATGCTCCAAAGACGATACCGTTGCACTCTGGGATCTCG
GCTCTAGAAACGCGCAAGGGAAATTGAAACTTGCGACTCCATACCTCGTG
GCCTTCGACCCTTCTGCTTCTGTCATTGCCATTGCATCCCAGTCAACCGC
GTCAGTCCTTCTTTACGACCTCCGCAACTACGACAAAGCTCCGTTCTCCA
GTTTCGACCTTGCGCCGTACGAGGAACGGTATACGCCTTCTACACGAGGC
AGGGGGTGGACTCGCCTGGAATTCTCCAATGATGGCAAGCACTTGCTTGT
CGGGACAGACTACCATGGGCATTTCATTCTCGATGCCTTCGAGGGCACCG
TTAAGGCGTTCTTGGTGGGCAAGGCCGGATCACCCGGAAGGGCTGCACCG
GTATCAACAACCGGGAAGCCTCTCGGTCAGGGAGATGCGTGCTTCTCACC
CGACGGGCGATACGTGGTTGGTGGTTCGGGAGATTATTCCGACATGCTAG
TGTGGGATCTACAACAATCTCCTCCAGAGCCAAACGGTCTATTGCAGCCA
ATGACTAGACTATCACATCGAGGACGGACTGCCATCGTTGAATACAATCC
GAGGTACAACATGATTGCGTCTGCCGACAAAGAGACAGTTTTCTGGCTTC
CAGAGGACCCTTCCAGATCTTCTGAAAAGTAGGCATTCCGAGGCCCAAAG
CAGGATACCTCTAATTATGTGACGTCGCTGGACTTTGATGACCAAGGAGA
TTACTTGGTGGCATCGGGTGATGATGAGACTATCCAGGTTTTCGATATCA
AGGAGGGCAAGTCTACAAAGTCGGTTCCCAGCAAGAAGTACGGCGCCCAT
CTAGCCAGGTTCACCCACCACAGTCGTCAGGTCCTCCATGCGAGCACCAA
GGTTGACGATGGCTGAAGGTCAACCGCAACCGACGGCGCAACCACAGCCC
CAGCAGCCAATTCTACAATGCCAGAAGGTCTCGGACATCATTCGTAGTTT
CCGTCCTACCAAGATTCATTGCGCTTGTTGGACCTTCACAATGAAGGCTA
CATTCGCTACTTCCAGGGTCACACCGACAAAGTCACCTGTTTAGCTCTAT
CTCCTGGCAGTGACTCCTTCATCTCATGCTCCAAAGACGATACCGTTGCA
CTCTGGGATCTCGGCTCTAGAAACGCGCAAGGGAAATTGAAACTTGCGAC
TCCATACCTCGTGGCCTTCGACCCTTCTGCTTCTGTCATTGCCATTGCAT
CCCAGTCAACCGCGTCAGTCCTTCTTTACGACCTCCGCAACTACGACAAA
GCTCCGTTCTCCAGTTTCGACCTTGCGCCGTACGAGGAACGGTATACGCC
TTCTACACGAGGCAGGGGGTGGACTCGCCTGGAATTCTCCAATGATGGCA
AGCACTTGCTTGTCGGGACAGACTACCATGGGCATTTCATTCTCGATGCC
TTCGAGGGCACCGTTAAGGCGTTCTTGGTGGGCAAGGCCGGATCACCCGG
AAGGGCTGCACCGGTATCAACAACCGGGAAGCCTCTCGGTCAGGGAGATG
CGTGCTTCTCACCCGACGGGCGATACGTGGTTGGTGGTTCGGGAGATTAT
TCCGACATGCTAGTGTGGGATCTACAACAATCTCCTCCAGAGCCAAACGG
TCTATTGCAGCCAATGACTAGACTATCACATCGAGGACGGACTGCCATCG
TTGAATACAATCCGAGGTACAACATGATTGCGTCTGCCGACAAAGAGACA
GTTTTCTGGCTTCCAGAGGACCCTTCCAGATCTTCTGAAAAGTAGGCATT
CCGAGGCCCAAAGCAGGATACCTCTAATTATGTGACGTCGCTGGACTTTG
ATGACCAAGGAGATTACTTGGTGGCATCGGGTGATGATGAGACTATCCAG
GTTTTCGATATCAAGGAGGGCAAGTCTACAAAGTCGGTTCCCAGCAAGAA
GTACGGCGCCCATCTAGCCAGGTTCACCCACCACAGTCGTCAGGTCCTCC
ATGCGAGCACCAAGGTTGACGATGGCTGAAGGTCAACCGCAACCGACGGC
GCAACCACAGCCCCAGCAGCCAATTCTACAATGCCAGAAGGTCTCGGACA
TCATTCGTAGTTTCCGTCCTACCAAGATTCATTGCGCTTGTTGGACCTTC
ACAATGAAGGCTACATTCGCTACTTCCAGGGTCACACCGACAAAGTCACC
TGTTTAGCTCTATCTCCTGGCAGTGACTCCTTCATCTCATGCTCCAAAGA
CGATACCGTTGCACTCTGGGATCTCGGCTCTAGAAACGCGCAAGGGAAAT
TGAAACTTGCGACTCCATACCTCGTGGCCTTCGACCCTTCTGCTTCTGTC
ATTGCCATTGCATCCCAGTCAACCGCGTCAGTCCTTCTTTACGACCTCCG
CAACTACGACAAAGCTCCGTTCTCCAGTTTCGACCTTGCGCCGTACGAGG
AACGGTATACGCCTTCTACACGAGGCAGGGGGTGGACTCGCCTGGAATTC
TCCAATGATGGCAAGCACTTGCTTGTCGGGACAGACTACCATGGGCATTT
CATTCTCGATGCCTTCGAGGGCACCGTTAAGGCGTTCTTGGTGGGCAAGG
CCGGATCACCCGGAAGGGCTGCACCGGTATCAACAACCGGGAAGCCTCTC
GGTCAGGGAGATGCGTGCTTCTCACCCGACGGGCGATACGTGGTTGGTGG
TTCGGGAGATTATTCCGACATGCTAGTGTGGGATCTACAACAATCTCCTC
CAGAGCCAAACGGTCTATTGCAGCCAATGACTAGACTATCACATCGAGGA
CGGACTGCCATCGTTGAATACAATCCGAGGTACAACATGATTGCGTCTGC
CGACAAAGAGACAGTTTTCTGGCTTCCAGAGGACCCTTCCAGATCTTCTG
AAAAGTAGGCATTCCGAGGCCCAAAGCAGGATACCTCTAATTATGTGACG
TCGCTGGACTTTGATGACCAAGGAGATTACTTGGTGGCATCGGGTGATGA
TGAGACTATCCAGGTTTTCGATATCAAGGAGGGCAAGTCTACAAAGTCGG
TTCCCAGCAAGAAGTACGGCGCCCATCTAGCCAGGTTCACCCACCACAGT
CGTCAGGTCCTCCATGCGAGCACCAAGGTTGACGATGGCTGAAGGTCAAC
CGCAACCGACGGCGCAACCACAGCCCCAGCAGCCAATTCTACAATGCCAG
AAGGTCTCGGACATCATTCGTAGTTTCCGTCCTACCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009106CBS51388_009106Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009106-T1CBS51388_009106-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009106-T1.cdsCBS51388_009106-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009106-T1.exon3CBS51388_009106-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009106-T1.exon2CBS51388_009106-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009106-T1.exon1CBS51388_009106-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1610699..1611926 -
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