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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:22612..23816- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009167-T1 ID=CBS51388_009167-T1|Name=CBS51388_009167-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1205bp|location=Sequence derived from alignment at An15:22612..23816- (Aspergillus niger CBS 513.88)
ATGTCTGGCGCAAGGCATTGGTAAGTGCTTCTCTTTACTCCATGTGATAT
GAATCCCAGTCATATCGGTCCTGACAATTGCTGGAATAGGGAGCAAGACA
AAGAGGCCACCGTCTACATCGGAAACCTCGATGAACGGGTTACAGATAGC
CTGGTATGGGAGCTGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCT
ACCGAAAGACCGAGTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAAT
TCATCAGCGAGGAAGATGCCGAATACGCGTCACGAATCATGAACGGAATC
CGCCTGTATGGAAAGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCA
AAAGTCGGTGGAGATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTA
TGGTTACGGAGCAAGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTG
GTCAATATCCCCAAGGTAGGACTTTATCCTTTCTATAGGCCTGTCATGCG
GCACCGTGTCTCGGAGGGGAACTTACTAACCATGGCTGCTACTAGATTGC
GCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTTCGCCG
ACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAATATCTT
ATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGGAAAGG
TGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGCTCGTA
AACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCTCAAAC
CCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGCTCTCG
GCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTATGGCTC
CTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCCGACCC
GTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCACGGCC
GCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCCACCAG
GATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCACCTCCG
CCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCTGGTCC
CCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCGCGGGC
GTTGA back to topCoding sequence (CDS) from alignment at An15:22612..23816- >CBS51388_009167-T1 ID=CBS51388_009167-T1|Name=CBS51388_009167-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3168bp|location=Sequence derived from alignment at An15:22612..23816- (Aspergillus niger CBS 513.88)
ATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTT
CGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAAT
ATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGG
AAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGC
TCGTAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCT
CAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGC
TCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTAT
GGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCC
GACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCA
CGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCC
ACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCAC
CTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCT
GGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCG
CGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTACATCGGAAACCTC
GATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGATGCTGCAGGCCGG
GCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCACACAGTCGCATC
AGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGATGCCGAATACGCG
TCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCCCATCCGCGTCAA
CAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTGGGGCAGAGCTAT
TCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTTCTTTATGACACA
TTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGATGTCTGGCGCAAG
GCATTGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGT
GTCGTTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACG
GCCAATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAA
GATGGGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGC
ACAAGCTCGTAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCAC
AATTCTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGT
GATAGCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAG
AGGTATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAG
CAAGCCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTA
CCAGCACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTT
CCTCCCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAG
CAGCACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGA
ACACCTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTA
TGCGCGCGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTACATCGGA
AACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGATGCTGCA
GGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCACACAGT
CGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGATGCCGAA
TACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCCCATCCG
CGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTGGGGCAG
AGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTTCTTTAT
GACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGATGTCTGG
CGCAAGGCATTGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGG
ATTTGTGTCGTTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACA
TGAACGGCCAATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTAT
AAGAAAGATGGGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCT
GGCTGCACAAGCTCGTAAACATAACGTGCGCCCACCAACCCAGCCGCTAC
CTCCACAATTCTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCC
AACGGTGATAGCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATAT
GGGCAGAGGTATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTC
CACAAGCAAGCCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCA
GGTTTACCAGCACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCA
GTCCTTCCTCCCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCC
CTCAAGCAGCACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCG
GCAGGAACACCTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACC
TGGCTATGCGCGCGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTAC
ATCGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGAT
GCTGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCA
CACAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGAT
GCCGAATACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCC
CATCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTG
GGGCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTT
CTTTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGAT
GTCTGGCGCAAGGCATTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034159 |
| DBxref | InterPro:IPR034158 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF13893 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:22612..23816 - |
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