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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:76033..77338+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009183-T1 ID=CBS51388_009183-T1|Name=CBS51388_009183-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1306bp|location=Sequence derived from alignment at An15:76033..77338+ (Aspergillus niger CBS 513.88)
ATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGC
GCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGTACGTACAGC
AGGTCCCAGCACTAAAGCCAGCTTAGGATGTCGAGTCTGATTGCCAAATT
TAAACAATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTT
GGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAA
CATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTT
CGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCG
GTTCTGGAGCTCAATGCTAGTGATGAAAGAGGTACATCTACCCCACTTGG
AGAGGGAGACGAGAGACGGCTTTAATCTAATATGCTCCAGGTATCGACGT
GGTACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGC
CTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGGTACGTACTA
GACAGTGAGCTACATTACCTTTCCTGGATGCTCACGGTGGTATAGTATGA
CATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCG
ACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCC
GATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGC
AAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACAT
AACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCG
TCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCA
GTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTC
CAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGA
GACACTGAATGAATTGTGGTATGTACACAGTGCAGTCTGCCAATTTTATG
TTTGTGGACTCGTCCTGACCGTATTTCTAGGGAATTGGGGTATTCCTCCC
ATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTG
TCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACAT
GCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTG
CGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAG
AATTGA back to topCoding sequence (CDS) from alignment at An15:76033..77338+ >CBS51388_009183-T1 ID=CBS51388_009183-T1|Name=CBS51388_009183-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5295bp|location=Sequence derived from alignment at An15:76033..77338+ (Aspergillus niger CBS 513.88)
ATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGC
GCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGGTAGAGAAAT
ATCGCCCGGTATATCTCGATGATATTGTTGGAAACACAGAAACAGTTGAG
CGCTTGAAGATCATCGCTAAGGATGGAAACATGCCGCACGTTATCATCTC
GGGCATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGAC
AGCTACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGT
GATGAAAGAGGTATCGACGTGGTACGGAACCGGATCAAAGGCTTTGCGCA
GAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATG
AGGCAGATAGTATGACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATG
GAGATTTACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAA
TAAAATCATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGTTATGCTC
GGTTGACCGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATGCGATGCT
GAGAAAGTGGAACATAACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGC
TGAGGGAGATATGCGTCAGGCTATCAACAACTTGCAGAGTACATGGTCGG
GTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCG
CACCCGATCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGT
TGATGCGGCGTTGGAGACACTGAATGAATTGTGGGAATTGGGGTATTCCT
CCCATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACT
CTGTCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCA
CATGCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCG
TTGCGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCG
AAGAATTGAATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGG
CCTCAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGG
TAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGGAAACACAGAA
ACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACATGCCGCACGT
TATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGCT
TGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCTC
AATGCTAGTGATGAAAGAGGTATCGACGTGGTACGGAACCGGATCAAAGG
CTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCA
TCCTTGATGAGGCAGATAGTATGACATCAGGTGCCCAGCAAGCTTTGCGG
CGTACAATGGAGATTTACTCGTCGACTACACGGTTCGCGTTCGCCTGTAA
TCAGTCAAATAAAATCATCGAGCCGATTCAGTCGCGATGCGCTATCCTAC
GTTATGCTCGGTTGACCGATGCGCAAATTGTCAAGCGTCTGAAACAAGTA
TGCGATGCTGAGAAAGTGGAACATAACGAAGAGGGCATTGCCGCCCTGGT
ATTCAGTGCTGAGGGAGATATGCGTCAGGCTATCAACAACTTGCAGAGTA
CATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTC
GACAGCCCGCACCCGATCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGA
AGGCAAGGTTGATGCGGCGTTGGAGACACTGAATGAATTGTGGGAATTGG
GGTATTCCTCCCATGATATCATCAGTACCATGTTCCGTGTCACCAAGACA
ATTCCCACTCTGTCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGG
TTTTACGCACATGCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTA
GCGGCTGCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTT
GAGCCGCCGAAGAATTGAATGGTTCAAGCCGAATCCTCAGCCAGTGCCTC
TCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGAAC
TGCCCTGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGGA
AACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACAT
GCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCGA
TCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGTT
CTGGAGCTCAATGCTAGTGATGAAAGAGGTATCGACGTGGTACGGAACCG
GATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATA
AGCTTGTCATCCTTGATGAGGCAGATAGTATGACATCAGGTGCCCAGCAA
GCTTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACGGTTCGCGTT
CGCCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGTCGCGATGCG
CTATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTCAAGCGTCTG
AAACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGAGGGCATTGC
CGCCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTATCAACAACT
TGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTC
AGGGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAATGATCAAGGC
CTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGAATGAATTGT
GGGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATGTTCCGTGTC
ACCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGAATTCATCCG
GGAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGCAGTCACTGC
TGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCG
CAGCTCTTTGAGCCGCCGAAGAATTGAATGGTTCAAGCCGAATCCTCAGC
CAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCCTG
ACTATGAACTGCCCTGGGTAGAGAAATATCGCCCGGTATATCTCGATGAT
ATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGA
TGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGA
CTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAG
GAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGGTATCGACGTGGT
ACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTG
GTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGTATGACATCAGGT
GCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACG
GTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGT
CGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTC
AAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGA
GGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTA
TCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGAC
AACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAAT
GATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGA
ATGAATTGTGGGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATG
TTCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGA
ATTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGC
AGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAAC
ATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGAATGGTTCAAGCCGA
ATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGGCG
CCCCTCCTGACTATGAACTGCCCTGGGTAGAGAAATATCGCCCGGTATAT
CTCGATGATATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCAT
CGCTAAGGATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGTA
TTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGAC
GCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGGTAT
CGACGTGGTACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTT
TGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGTATG
ACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTC
GACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGC
CGATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCG
CAAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACA
TAACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGC
GTCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTC
AGTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGT
CCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGG
AGACACTGAATGAATTGTGGGAATTGGGGTATTCCTCCCATGATATCATC
AGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTC
GAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAG
ACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGC
AGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR008921 |
| DBxref | InterPro:IPR003959 |
| DBxref | InterPro:IPR013748 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF08542 |
| DBxref | PFAM:PF13173 |
| DBxref | PFAM:PF00004 |
| Product | replication factor C subunit 4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:76033..77338 + |
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