You are here

Home

CBS51388_009200-T1, CBS51388_009200-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009200-T1
Unique NameCBS51388_009200-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:129529..131453+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009200-T1 ID=CBS51388_009200-T1|Name=CBS51388_009200-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1925bp|location=Sequence derived from alignment at An15:129529..131453+ (Aspergillus niger CBS 513.88)
ATGGATGTCGTCGCGGCGGTGTCGGGTTACATCTCCAAGATGGTCACCGC
GGGGGACCCTTCGCCGACAGGTGGTTCCAGCTCTTCATCGGCCAAGATGA
AGATATTGCTTCTCGACAGTGAGACAGTGGGACTTGCGATTCTCTCATTG
ATCCCTGTGGAAGCTGTGCGCTAATCCAACGGCTCCAGGTACCCATTGTG
TCCACCGCCATCACCCAGTCCGCTTTGTTGAACCATGAAGTCTACCTCAT
CGATCGCCTCGATAATGCCGCTCGCGAACGTATGCGACATCTCCGCTGCC
TTTGTTTCGTGCGCCCTTCCCCCACCTCCGTTCAATTCCTGATCGACGAG
CTCCGCGAGCCCAAGTACGGAGAATACTACATCTACCTCACCAATATTAT
TCGCAAATCCTCCCTCGAACGTCTCGCCGAAGCGGATTCCCACGAGGTAG
TTCGCGTGGTGCAGGAACACTTTGCCGACTTCCTTGTGATCAATCCGGAT
CTCTGTTCCCTGAATTTGGGCTTCCCACAGCAGCGCTTGTGGAGCCAGTC
GCCAGATCTGTGGAATGCGGATGCCTTACAAAGAGCAACGGAGGGGGTCA
TTGCCATGTTGTTGGCGCTGAAGAAGAATCCGCTGATCCGTTACGAAAAG
AACAGTCTGCTAGCGAAGAAGTTGGCCACAGAGGTCCGCTATCAAGTGAC
GCAGGAAGAGCAGCTCTTCAATTTCCGCAAGACCGATACACCCCCGATCC
TGTTGATTTTGGACCGTAGAGACGACCCCATCACTCCGCTACTGACCCAG
TGGACCTACCAAGCGATGGTGCATGAGTTGATGGGCATTCACAATGGGCG
CGTGGACCTCCGGGACGTACCGGAGATTCGACCGGAATTGCGTGAAATCG
TCCTTTCCCAGGATCAAGATCCGTTCTTCAAGAAGAATATGTACCAGAAC
TTTGGTGATCTAGGCCAGAACATCAAGGAGTATGTTGAGCAGTACCAGGT
CAAAACGCAAAACACGATGAACATCGAGTCGATTGCGGACATGAAGCGCT
TCGTGGAGGACTATCCCGAGTTTCGTAAACTATCGGGCAATGTGAGTAAA
CATGTCACACTAGTGGGGGAGCTGAGTCGGCGCGTGGGTGAGGATGACCT
GCTCGACGTCAGTGAGTTGGAGCAGAGCTTGGCTTGCAATGACAACCACG
CCAATGACCTCAAGGTACGTGGACTCTTTTTTCTCTCTCCGGGACGGAGC
TTGCGCCAGACCAGTTGTTGACACCATCTCGTGCAGAACCTACAACGAAT
CATTCAACTACCTAGCGTTCCTGCAGAGAACAAGTTGCGCTTGGTTGCTC
TGTACGCCATCCGCTACGAGAAGCAACCGAACAATGCACTCCCGATCCTG
CTCGATCTCCTCGTCACCGCCGGCAACGTCCCATCATACAAGGTCAACAT
TATCCCTAAACTCCTCGCCTACCACCACTCCTTACAAGCCCCGCCGGTCG
CAGGCGGCTTTTCTGACCTCTTCGAATCCACATCCCTCTTCTCCGGTGCC
CGAGACCGGTTCAAGGGTCTGAAAGGCGTCGAAAACGTCTACACCCAGCA
CTCGCCTCGCCTGGAAGCCACTCTCCAAAATCTGATTAAAGGACGCCTGA
AGGAGCTGCAATACCCGTTTCTCGAAGGCGGGGGCCATACACGAGACAAG
CCCCAAGATATCATCATTTTCATGGTGGGCGGGGCGACGTATGAGGAAGC
GAAAATGGTCGCCCAAGTCAATGCCAGCTCACCTGGAGTAAGAGTCGTCT
TAGGAGGCACCTCCATTCACAATAGCACAAGCTTCCTTGAGGAAGTCGAT
GATGCCGTGAGCGGCTGGCCTGAGCCCGCCCCCTCGTCCGCCGCTGGTCG
GCTTCAGAGGGCAGTCGGACATTAA
back to top

Coding sequence (CDS) from alignment at An15:129529..131453+

>CBS51388_009200-T1 ID=CBS51388_009200-T1|Name=CBS51388_009200-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5373bp|location=Sequence derived from alignment at An15:129529..131453+ (Aspergillus niger CBS 513.88)
ATGGATGTCGTCGCGGCGGTGTCGGGTTACATCTCCAAGATGGTCACCGC
GGGGGACCCTTCGCCGACAGGTGGTTCCAGCTCTTCATCGGCCAAGATGA
AGATATTGCTTCTCGACAGTGAGACAGTACCCATTGTGTCCACCGCCATC
ACCCAGTCCGCTTTGTTGAACCATGAAGTCTACCTCATCGATCGCCTCGA
TAATGCCGCTCGCGAACGTATGCGACATCTCCGCTGCCTTTGTTTCGTGC
GCCCTTCCCCCACCTCCGTTCAATTCCTGATCGACGAGCTCCGCGAGCCC
AAGTACGGAGAATACTACATCTACCTCACCAATATTATTCGCAAATCCTC
CCTCGAACGTCTCGCCGAAGCGGATTCCCACGAGGTAGTTCGCGTGGTGC
AGGAACACTTTGCCGACTTCCTTGTGATCAATCCGGATCTCTGTTCCCTG
AATTTGGGCTTCCCACAGCAGCGCTTGTGGAGCCAGTCGCCAGATCTGTG
GAATGCGGATGCCTTACAAAGAGCAACGGAGGGGGTCATTGCCATGTTGT
TGGCGCTGAAGAAGAATCCGCTGATCCGTTACGAAAAGAACAGTCTGCTA
GCGAAGAAGTTGGCCACAGAGGTCCGCTATCAAGTGACGCAGGAAGAGCA
GCTCTTCAATTTCCGCAAGACCGATACACCCCCGATCCTGTTGATTTTGG
ACCGTAGAGACGACCCCATCACTCCGCTACTGACCCAGTGGACCTACCAA
GCGATGGTGCATGAGTTGATGGGCATTCACAATGGGCGCGTGGACCTCCG
GGACGTACCGGAGATTCGACCGGAATTGCGTGAAATCGTCCTTTCCCAGG
ATCAAGATCCGTTCTTCAAGAAGAATATGTACCAGAACTTTGGTGATCTA
GGCCAGAACATCAAGGAGTATGTTGAGCAGTACCAGGTCAAAACGCAAAA
CACGATGAACATCGAGTCGATTGCGGACATGAAGCGCTTCGTGGAGGACT
ATCCCGAGTTTCGTAAACTATCGGGCAATGTGAGTAAACATGTCACACTA
GTGGGGGAGCTGAGTCGGCGCGTGGGTGAGGATGACCTGCTCGACGTCAG
TGAGTTGGAGCAGAGCTTGGCTTGCAATGACAACCACGCCAATGACCTCA
AGAACCTACAACGAATCATTCAACTACCTAGCGTTCCTGCAGAGAACAAG
TTGCGCTTGGTTGCTCTGTACGCCATCCGCTACGAGAAGCAACCGAACAA
TGCACTCCCGATCCTGCTCGATCTCCTCGTCACCGCCGGCAACGTCCCAT
CATACAAGGTCAACATTATCCCTAAACTCCTCGCCTACCACCACTCCTTA
CAAGCCCCGCCGGTCGCAGGCGGCTTTTCTGACCTCTTCGAATCCACATC
CCTCTTCTCCGGTGCCCGAGACCGGTTCAAGGGTCTGAAAGGCGTCGAAA
ACGTCTACACCCAGCACTCGCCTCGCCTGGAAGCCACTCTCCAAAATCTG
ATTAAAGGACGCCTGAAGGAGCTGCAATACCCGTTTCTCGAAGGCGGGGG
CCATACACGAGACAAGCCCCAAGATATCATCATTTTCATGGTGGGCGGGG
CGACGTATGAGGAAGCGAAAATGGTCGCCCAAGTCAATGCCAGCTCACCT
GGAGTAAGAGTCGTCTTAGGAGGCACCTCCATTCACAATAGCACAAGCTT
CCTTGAGGAAGTCGATGATGCCGTGAGCGGCTGGCCTGAGCCCGCCCCCT
CGTCCGCCGCTGGTCGGCTTCAGAGGGCAGTCGGACATTAAATGGATGTC
GTCGCGGCGGTGTCGGGTTACATCTCCAAGATGGTCACCGCGGGGGACCC
TTCGCCGACAGGTGGTTCCAGCTCTTCATCGGCCAAGATGAAGATATTGC
TTCTCGACAGTGAGACAGTACCCATTGTGTCCACCGCCATCACCCAGTCC
GCTTTGTTGAACCATGAAGTCTACCTCATCGATCGCCTCGATAATGCCGC
TCGCGAACGTATGCGACATCTCCGCTGCCTTTGTTTCGTGCGCCCTTCCC
CCACCTCCGTTCAATTCCTGATCGACGAGCTCCGCGAGCCCAAGTACGGA
GAATACTACATCTACCTCACCAATATTATTCGCAAATCCTCCCTCGAACG
TCTCGCCGAAGCGGATTCCCACGAGGTAGTTCGCGTGGTGCAGGAACACT
TTGCCGACTTCCTTGTGATCAATCCGGATCTCTGTTCCCTGAATTTGGGC
TTCCCACAGCAGCGCTTGTGGAGCCAGTCGCCAGATCTGTGGAATGCGGA
TGCCTTACAAAGAGCAACGGAGGGGGTCATTGCCATGTTGTTGGCGCTGA
AGAAGAATCCGCTGATCCGTTACGAAAAGAACAGTCTGCTAGCGAAGAAG
TTGGCCACAGAGGTCCGCTATCAAGTGACGCAGGAAGAGCAGCTCTTCAA
TTTCCGCAAGACCGATACACCCCCGATCCTGTTGATTTTGGACCGTAGAG
ACGACCCCATCACTCCGCTACTGACCCAGTGGACCTACCAAGCGATGGTG
CATGAGTTGATGGGCATTCACAATGGGCGCGTGGACCTCCGGGACGTACC
GGAGATTCGACCGGAATTGCGTGAAATCGTCCTTTCCCAGGATCAAGATC
CGTTCTTCAAGAAGAATATGTACCAGAACTTTGGTGATCTAGGCCAGAAC
ATCAAGGAGTATGTTGAGCAGTACCAGGTCAAAACGCAAAACACGATGAA
CATCGAGTCGATTGCGGACATGAAGCGCTTCGTGGAGGACTATCCCGAGT
TTCGTAAACTATCGGGCAATGTGAGTAAACATGTCACACTAGTGGGGGAG
CTGAGTCGGCGCGTGGGTGAGGATGACCTGCTCGACGTCAGTGAGTTGGA
GCAGAGCTTGGCTTGCAATGACAACCACGCCAATGACCTCAAGAACCTAC
AACGAATCATTCAACTACCTAGCGTTCCTGCAGAGAACAAGTTGCGCTTG
GTTGCTCTGTACGCCATCCGCTACGAGAAGCAACCGAACAATGCACTCCC
GATCCTGCTCGATCTCCTCGTCACCGCCGGCAACGTCCCATCATACAAGG
TCAACATTATCCCTAAACTCCTCGCCTACCACCACTCCTTACAAGCCCCG
CCGGTCGCAGGCGGCTTTTCTGACCTCTTCGAATCCACATCCCTCTTCTC
CGGTGCCCGAGACCGGTTCAAGGGTCTGAAAGGCGTCGAAAACGTCTACA
CCCAGCACTCGCCTCGCCTGGAAGCCACTCTCCAAAATCTGATTAAAGGA
CGCCTGAAGGAGCTGCAATACCCGTTTCTCGAAGGCGGGGGCCATACACG
AGACAAGCCCCAAGATATCATCATTTTCATGGTGGGCGGGGCGACGTATG
AGGAAGCGAAAATGGTCGCCCAAGTCAATGCCAGCTCACCTGGAGTAAGA
GTCGTCTTAGGAGGCACCTCCATTCACAATAGCACAAGCTTCCTTGAGGA
AGTCGATGATGCCGTGAGCGGCTGGCCTGAGCCCGCCCCCTCGTCCGCCG
CTGGTCGGCTTCAGAGGGCAGTCGGACATTAAATGGATGTCGTCGCGGCG
GTGTCGGGTTACATCTCCAAGATGGTCACCGCGGGGGACCCTTCGCCGAC
AGGTGGTTCCAGCTCTTCATCGGCCAAGATGAAGATATTGCTTCTCGACA
GTGAGACAGTACCCATTGTGTCCACCGCCATCACCCAGTCCGCTTTGTTG
AACCATGAAGTCTACCTCATCGATCGCCTCGATAATGCCGCTCGCGAACG
TATGCGACATCTCCGCTGCCTTTGTTTCGTGCGCCCTTCCCCCACCTCCG
TTCAATTCCTGATCGACGAGCTCCGCGAGCCCAAGTACGGAGAATACTAC
ATCTACCTCACCAATATTATTCGCAAATCCTCCCTCGAACGTCTCGCCGA
AGCGGATTCCCACGAGGTAGTTCGCGTGGTGCAGGAACACTTTGCCGACT
TCCTTGTGATCAATCCGGATCTCTGTTCCCTGAATTTGGGCTTCCCACAG
CAGCGCTTGTGGAGCCAGTCGCCAGATCTGTGGAATGCGGATGCCTTACA
AAGAGCAACGGAGGGGGTCATTGCCATGTTGTTGGCGCTGAAGAAGAATC
CGCTGATCCGTTACGAAAAGAACAGTCTGCTAGCGAAGAAGTTGGCCACA
GAGGTCCGCTATCAAGTGACGCAGGAAGAGCAGCTCTTCAATTTCCGCAA
GACCGATACACCCCCGATCCTGTTGATTTTGGACCGTAGAGACGACCCCA
TCACTCCGCTACTGACCCAGTGGACCTACCAAGCGATGGTGCATGAGTTG
ATGGGCATTCACAATGGGCGCGTGGACCTCCGGGACGTACCGGAGATTCG
ACCGGAATTGCGTGAAATCGTCCTTTCCCAGGATCAAGATCCGTTCTTCA
AGAAGAATATGTACCAGAACTTTGGTGATCTAGGCCAGAACATCAAGGAG
TATGTTGAGCAGTACCAGGTCAAAACGCAAAACACGATGAACATCGAGTC
GATTGCGGACATGAAGCGCTTCGTGGAGGACTATCCCGAGTTTCGTAAAC
TATCGGGCAATGTGAGTAAACATGTCACACTAGTGGGGGAGCTGAGTCGG
CGCGTGGGTGAGGATGACCTGCTCGACGTCAGTGAGTTGGAGCAGAGCTT
GGCTTGCAATGACAACCACGCCAATGACCTCAAGAACCTACAACGAATCA
TTCAACTACCTAGCGTTCCTGCAGAGAACAAGTTGCGCTTGGTTGCTCTG
TACGCCATCCGCTACGAGAAGCAACCGAACAATGCACTCCCGATCCTGCT
CGATCTCCTCGTCACCGCCGGCAACGTCCCATCATACAAGGTCAACATTA
TCCCTAAACTCCTCGCCTACCACCACTCCTTACAAGCCCCGCCGGTCGCA
GGCGGCTTTTCTGACCTCTTCGAATCCACATCCCTCTTCTCCGGTGCCCG
AGACCGGTTCAAGGGTCTGAAAGGCGTCGAAAACGTCTACACCCAGCACT
CGCCTCGCCTGGAAGCCACTCTCCAAAATCTGATTAAAGGACGCCTGAAG
GAGCTGCAATACCCGTTTCTCGAAGGCGGGGGCCATACACGAGACAAGCC
CCAAGATATCATCATTTTCATGGTGGGCGGGGCGACGTATGAGGAAGCGA
AAATGGTCGCCCAAGTCAATGCCAGCTCACCTGGAGTAAGAGTCGTCTTA
GGAGGCACCTCCATTCACAATAGCACAAGCTTCCTTGAGGAAGTCGATGA
TGCCGTGAGCGGCTGGCCTGAGCCCGCCCCCTCGTCCGCCGCTGGTCGGC
TTCAGAGGGCAGTCGGACATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006904vesicle docking involved in exocytosis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009200CBS51388_009200Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009200-T1.exon1CBS51388_009200-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009200-T1.exon2CBS51388_009200-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009200-T1.exon3CBS51388_009200-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009200-T1.cdsCBS51388_009200-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009200-T1CBS51388_009200-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036045
DBxrefInterPro:IPR027482
DBxrefInterPro:IPR001619
DBxrefInterPro:IPR043127
DBxrefInterPro:IPR043154
DBxrefPFAM:PF00995
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:129529..131453 +
Powered by Drupal