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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:186635..187266+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009218-T1 ID=CBS51388_009218-T1|Name=CBS51388_009218-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=632bp|location=Sequence derived from alignment at An15:186635..187266+ (Aspergillus niger CBS 513.88)
ATGCCTCCCAAGACAGGCGGTCGCGGTCGCAAGAGCATTGTGGCGGCGCC
GCGACAATCAACAGCTGGCGACCGTGCTGCCGCAAGCTCGTCGAAAGCAG
CTGCAACGACGTCGCCGGCAGCTAAAAAAGTGCGCAAATCCACTGGACCG
GCTAGGGGAGGGAAAAGGCCTGCTGGAAAGGCACCCAGAGAGTCCGACGT
TCAGCGTGCGTACCCCCACCTTCAATCCAAAATCCTCTCTGCGCTCTCTC
TCTCTCCTGAAGAATGAAAATTGACATCCTCGCAGCTGGTGATCCCACAC
CACAAGGACGTGTACGCCGCTACAAGCCTGGAACCGTGGCTCTCAAAGAG
ATCCGCAAGTACCAGCGCTCTTATGATCTGCTTATCCAAAAGCTTCCTTT
TGCTCGGCTGGTCCGCGAGGTCGCTCTTGACCTCCTCCCTTCAGAAGTTG
GCGCCGAGCTGCGGTGGCAGTCGCATGCGATCCAAGCGCTCCAAGAAGCA
GCCGAAGCTTTCCTTGTACATCTCTTCGAGGACACCAACCTCTGTGCTAT
TCACGCCAAGCGCGTGACCATCATGCAGAAAGATATCCAACTTGCTCGAC
GCATTCGTGGTGTCTGGGGTGGTTTGGGCTAA back to topCoding sequence (CDS) from alignment at An15:186635..187266+ >CBS51388_009218-T1 ID=CBS51388_009218-T1|Name=CBS51388_009218-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1104bp|location=Sequence derived from alignment at An15:186635..187266+ (Aspergillus niger CBS 513.88)
ATGCCTCCCAAGACAGGCGGTCGCGGTCGCAAGAGCATTGTGGCGGCGCC
GCGACAATCAACAGCTGGCGACCGTGCTGCCGCAAGCTCGTCGAAAGCAG
CTGCAACGACGTCGCCGGCAGCTAAAAAAGTGCGCAAATCCACTGGACCG
GCTAGGGGAGGGAAAAGGCCTGCTGGAAAGGCACCCAGAGAGTCCGACGT
TCAGCCTGGTGATCCCACACCACAAGGACGTGTACGCCGCTACAAGCCTG
GAACCGTGGCTCTCAAAGAGATCCGCAAGTACCAGCGCTCTTATGATCTG
CTTATCCAAAAGCTTCCTTTTGCTCGGCTGGTCCGCGAGGTCGCTCTTGA
CCTCCTCCCTTCAGAAGTTGGCGCCGAGCTGCGGTGGCAGTCGCATGCGA
TCCAAGCGCTCCAAGAAGCAGCCGAAGCTTTCCTTGTACATCTCTTCGAG
GACACCAACCTCTGTGCTATTCACGCCAAGCGCGTGACCATCATGCAGAA
AGATATCCAACTTGCTCGACGCATTCGTGGTGTCTGGGGTGGTTTGGGCT
AAATGCCTCCCAAGACAGGCGGTCGCGGTCGCAAGAGCATTGTGGCGGCG
CCGCGACAATCAACAGCTGGCGACCGTGCTGCCGCAAGCTCGTCGAAAGC
AGCTGCAACGACGTCGCCGGCAGCTAAAAAAGTGCGCAAATCCACTGGAC
CGGCTAGGGGAGGGAAAAGGCCTGCTGGAAAGGCACCCAGAGAGTCCGAC
GTTCAGCCTGGTGATCCCACACCACAAGGACGTGTACGCCGCTACAAGCC
TGGAACCGTGGCTCTCAAAGAGATCCGCAAGTACCAGCGCTCTTATGATC
TGCTTATCCAAAAGCTTCCTTTTGCTCGGCTGGTCCGCGAGGTCGCTCTT
GACCTCCTCCCTTCAGAAGTTGGCGCCGAGCTGCGGTGGCAGTCGCATGC
GATCCAAGCGCTCCAAGAAGCAGCCGAAGCTTTCCTTGTACATCTCTTCG
AGGACACCAACCTCTGTGCTATTCACGCCAAGCGCGTGACCATCATGCAG
AAAGATATCCAACTTGCTCGACGCATTCGTGGTGTCTGGGGTGGTTTGGG
CTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000786 | nucleosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007125 |
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR000164 |
| DBxref | PFAM:PF00125 |
| Product | Histone H3-like centromeric protein hH3v |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:186635..187266 + |
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