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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:208083..210047+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009226-T1 ID=CBS51388_009226-T1|Name=CBS51388_009226-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1965bp|location=Sequence derived from alignment at An15:208083..210047+ (Aspergillus niger CBS 513.88)
ATGGAGTCAGCAAACGCACCGGCATTCGATGCCTCTAGTATAGACAGTCG
CCTTTGTCATGATGGCTCCAATTCTTCCGTAGTGGGAGACGATAAGCCTG
CATGGAGACCGTATAAAGGCCGTTGGGCTCGTCAGAAAATGAGGAATACC
AAGCGCAACAGCACAGAAAATCCGGACACGACGGCTCCAGGAAATGCTCC
CCCGGCTGCTCGCCCGCGGCAAAAGCTACCACGACGGAGCAAACAGTTAG
CCGAAAAGAACATTCGCGAAGAGATGCAATCTCAAGCATCACAGTCTGCC
GGTTCAGCGTCCTATGTACCAGGTCAACCACCCCAGAACAGCTTTGGGGC
GTTTGACAACATCAATTTGGCTGCTATGGTTCCCCCGTTCCAGAATGGCA
TGGCTGCGCCAAACGAAAATGTTCCAGGGTTTCAACAGCCCTTTTGGCAG
CTCCCATGGGAGCAACAGCAATTGCTATTCCATGCTCCTGTGGGTGAATC
CACTAACCCTTCTTTCGGTTTCCCTCCGTTGAATGACATGGGTGCGTTCC
CTGGTGGATTACCTCCCATGTTTCCGCCTGCGTTCATGAACTTTGCGTCA
ACGAATCCATTGATGGCAATGCCACCGTTCGGACCCATGGCCTTCCAAGC
AGCTGGCTCTGCTGGAATCAATACCCGCAATATGTCCAGTCAGGTCCCAT
CACCACGCCCGGGTTCTTCATCCAGGGCACGCGCTAGTCCTCGACCTCGT
TCCAAAAGGTTCGACTCCCCGACACCACCTAAAAGAGCTATGCCAACACC
GGCCTACCTCGAGCAGTCGTCAAAGCCAGCCAAACGGAACTCCTGGTCAC
AACCTCTACTAGTCATCCTGGATTTGAATGGCACGCTCGTCCACCGGCCT
GACCGGTACATGCCACCTCGGTTTAAGAGAAGAGCGGGACTGGACATCTT
CATACAGACGTTGATGCAGAAATACAAAGTCATGATATGGTCGAGTGCCC
GACCTCCCACCGTAGACGGCATCTGCCGCCAACTCTTCATCAATGACAGC
CGGACGCAAATCGTCGCCGAATGGCACCGCGAGCACTTCAATCTCACTCC
GCAGCAATACGATGCCAAAATCCAGGTCTACAAAACCCTCAGTACCGTAT
GGGCCGACGAAAAGGTCCAAGCATCATACCCCAACCCCAAAGACCTAGGC
TCGTCCGTGCCTGCAACCTTCCAAAAGACCCGCTGGGACCAAACCAACAC
CATCTTAATCGACGACACCCGCCTCAAAGCAAGCAGCGAACCAAGCAATC
TCCTCGAAATCCCCACCTTCGACGGATCCTCCGGCGCCGAAGACGCCGCC
ACATTAACCAAGGTCCTCCAAATGCTCGAGGAGCTATCCTTACACGACGA
CGTCAGCCAAGTCCTCCACAAATGGTACAACTCGATCCCCAAAACAGGCA
ACCTCTGCCTGGACATCAAGCTCCAAGAAGACCCCGAAGCCCAACATCAA
CTCCAAACCCAATGCTACAACGGCCCCCTCACCCCAACGGAGATCGCCGA
AGCACGCAAACAGCGCCGCAAAGCCCGCAAGCGTGAAAAGGTCGCCGAGA
AAGCCAGAGCCCGTCAGATCCAGAAGCAAGAACAGCGTTTAGCCAAACAG
TACCCACCCCCTCCCACATATACCCCAGGGGTCGTCGCCTCATCTACTGT
CGATGAGACGAATACTGTCACACCACGTACAGATCTCTCTTCCTCCAACT
CATTCCCTCCTCATTCTCCATCATCACCTTCATCTGACTCGACACCGGGT
GGCACTGCTATACCAACAGGATATGATGTCAATGACAAGGTCAAAAGGAC
TTTGAGGGTTGCTGGTGATGATGATGCGAGTGATCGTTCCCCGTCGCCTG
CTGCCTCAACTCAATCTGAGAATTATCTCTTGGATCGGTTGGAGGAGTCA
TTGAAGACGGGTTGA back to topCoding sequence (CDS) from alignment at An15:208083..210047+ >CBS51388_009226-T1 ID=CBS51388_009226-T1|Name=CBS51388_009226-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1965bp|location=Sequence derived from alignment at An15:208083..210047+ (Aspergillus niger CBS 513.88)
ATGGAGTCAGCAAACGCACCGGCATTCGATGCCTCTAGTATAGACAGTCG
CCTTTGTCATGATGGCTCCAATTCTTCCGTAGTGGGAGACGATAAGCCTG
CATGGAGACCGTATAAAGGCCGTTGGGCTCGTCAGAAAATGAGGAATACC
AAGCGCAACAGCACAGAAAATCCGGACACGACGGCTCCAGGAAATGCTCC
CCCGGCTGCTCGCCCGCGGCAAAAGCTACCACGACGGAGCAAACAGTTAG
CCGAAAAGAACATTCGCGAAGAGATGCAATCTCAAGCATCACAGTCTGCC
GGTTCAGCGTCCTATGTACCAGGTCAACCACCCCAGAACAGCTTTGGGGC
GTTTGACAACATCAATTTGGCTGCTATGGTTCCCCCGTTCCAGAATGGCA
TGGCTGCGCCAAACGAAAATGTTCCAGGGTTTCAACAGCCCTTTTGGCAG
CTCCCATGGGAGCAACAGCAATTGCTATTCCATGCTCCTGTGGGTGAATC
CACTAACCCTTCTTTCGGTTTCCCTCCGTTGAATGACATGGGTGCGTTCC
CTGGTGGATTACCTCCCATGTTTCCGCCTGCGTTCATGAACTTTGCGTCA
ACGAATCCATTGATGGCAATGCCACCGTTCGGACCCATGGCCTTCCAAGC
AGCTGGCTCTGCTGGAATCAATACCCGCAATATGTCCAGTCAGGTCCCAT
CACCACGCCCGGGTTCTTCATCCAGGGCACGCGCTAGTCCTCGACCTCGT
TCCAAAAGGTTCGACTCCCCGACACCACCTAAAAGAGCTATGCCAACACC
GGCCTACCTCGAGCAGTCGTCAAAGCCAGCCAAACGGAACTCCTGGTCAC
AACCTCTACTAGTCATCCTGGATTTGAATGGCACGCTCGTCCACCGGCCT
GACCGGTACATGCCACCTCGGTTTAAGAGAAGAGCGGGACTGGACATCTT
CATACAGACGTTGATGCAGAAATACAAAGTCATGATATGGTCGAGTGCCC
GACCTCCCACCGTAGACGGCATCTGCCGCCAACTCTTCATCAATGACAGC
CGGACGCAAATCGTCGCCGAATGGCACCGCGAGCACTTCAATCTCACTCC
GCAGCAATACGATGCCAAAATCCAGGTCTACAAAACCCTCAGTACCGTAT
GGGCCGACGAAAAGGTCCAAGCATCATACCCCAACCCCAAAGACCTAGGC
TCGTCCGTGCCTGCAACCTTCCAAAAGACCCGCTGGGACCAAACCAACAC
CATCTTAATCGACGACACCCGCCTCAAAGCAAGCAGCGAACCAAGCAATC
TCCTCGAAATCCCCACCTTCGACGGATCCTCCGGCGCCGAAGACGCCGCC
ACATTAACCAAGGTCCTCCAAATGCTCGAGGAGCTATCCTTACACGACGA
CGTCAGCCAAGTCCTCCACAAATGGTACAACTCGATCCCCAAAACAGGCA
ACCTCTGCCTGGACATCAAGCTCCAAGAAGACCCCGAAGCCCAACATCAA
CTCCAAACCCAATGCTACAACGGCCCCCTCACCCCAACGGAGATCGCCGA
AGCACGCAAACAGCGCCGCAAAGCCCGCAAGCGTGAAAAGGTCGCCGAGA
AAGCCAGAGCCCGTCAGATCCAGAAGCAAGAACAGCGTTTAGCCAAACAG
TACCCACCCCCTCCCACATATACCCCAGGGGTCGTCGCCTCATCTACTGT
CGATGAGACGAATACTGTCACACCACGTACAGATCTCTCTTCCTCCAACT
CATTCCCTCCTCATTCTCCATCATCACCTTCATCTGACTCGACACCGGGT
GGCACTGCTATACCAACAGGATATGATGTCAATGACAAGGTCAAAAGGAC
TTTGAGGGTTGCTGGTGATGATGATGCGAGTGATCGTTCCCCGTCGCCTG
CTGCCTCAACTCAATCTGAGAATTATCTCTTGGATCGGTTGGAGGAGTCA
TTGAAGACGGGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR023214 |
| DBxref | InterPro:IPR004274 |
| DBxref | PFAM:PF03031 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:208083..210047 + |
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