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CBS51388_009227-T1, CBS51388_009227-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009227-T1
Unique NameCBS51388_009227-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:212386..213413+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009227-T1 ID=CBS51388_009227-T1|Name=CBS51388_009227-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1028bp|location=Sequence derived from alignment at An15:212386..213413+ (Aspergillus niger CBS 513.88)
ATGGCCTGGCAAAGCCCCAATGGCCTTGTGCACGCCATGCACTCCATCCG
TCGAACTGCTCAATTGCGGCCTTTTGTCCAGCGCTCCGTGATCTCCGCAT
CATCCCCGGTCTCCTCTCCCTCCACGCCGGCTCTCCTCCAGCAATACAAG
AATGCCCGCAGCTATGCGACAGAACTACAACCCGTTGCTGCTCCCCCCAT
TGAGTTCTCCAAATTCCAGATCCAGCCTGCCCGCATTATCCCCGTGTCGC
CGGCCTACTTCTCCGGCAGCCCCAAGTTCTTCGACCACATGCTGAAGCTG
GAAGCCCTTCTGGCCAAGTATGCCGCACTACCCACGGTGTCTCCTAGCGA
AGCCCCCAGAATGGCCTGGTTCAAGCTGCTTCAGTTCCGTGATGCCGTGG
GCGAGCCCGTCCCGACCAAGAAGTACAAGGGCCTCATCAAGCTCCTGCAG
CGTCTCAACCGCATCGACCCCAAGGTTGCCCCGGAGGAGGTTCGTACGGC
TCTCAACTTCTTCCTTCGTCCGGGTAATCCGTATGGAAACAAGCCCGCCC
CCAGGACGGTGGATGAACAGGGCAAGGCCCGTGGTAAGGGCAAGCGCAAG
GCGTCCTCGGCGGTGGTGCAGCTGGTCGAGGGTGAGGGTGAAGTGTTGGT
GAACGGAAAGACGCTGAACGAGGCTTTCCCTCGTCTACATGACCGTGAGA
GTGCTGTCTGGCCTCTTCGGTGTACGTCACGGCTCGACAAGTATAACGTG
TGGGCTACCGTTCGCGGTGGAGGAGTGACCGGTCAGGCGGAGGCTATTAC
ATTGGCTGTTGCACGGGCTCTGCTGGTTCACGAACCTGCTCTTAAGCCTA
TCCTGCGGAAGGGTACGTATCTCCGACTCCCGACGAATTGGTTGGTAGTA
GTGGAGCGAATTGCTGACCGATTTATTTTCTTACAGCTGGTGTGGTTACC
GTGGATGCCCGTCGTGTGGAGAGAAAGAAGCCCGGTCATGTCAAGGCCCG
CAAGATGCCCACTTGGGTCAAGCGGTGA
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Coding sequence (CDS) from alignment at An15:212386..213413+

>CBS51388_009227-T1 ID=CBS51388_009227-T1|Name=CBS51388_009227-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1908bp|location=Sequence derived from alignment at An15:212386..213413+ (Aspergillus niger CBS 513.88)
ATGGCCTGGCAAAGCCCCAATGGCCTTGTGCACGCCATGCACTCCATCCG
TCGAACTGCTCAATTGCGGCCTTTTGTCCAGCGCTCCGTGATCTCCGCAT
CATCCCCGGTCTCCTCTCCCTCCACGCCGGCTCTCCTCCAGCAATACAAG
AATGCCCGCAGCTATGCGACAGAACTACAACCCGTTGCTGCTCCCCCCAT
TGAGTTCTCCAAATTCCAGATCCAGCCTGCCCGCATTATCCCCGTGTCGC
CGGCCTACTTCTCCGGCAGCCCCAAGTTCTTCGACCACATGCTGAAGCTG
GAAGCCCTTCTGGCCAAGTATGCCGCACTACCCACGGTGTCTCCTAGCGA
AGCCCCCAGAATGGCCTGGTTCAAGCTGCTTCAGTTCCGTGATGCCGTGG
GCGAGCCCGTCCCGACCAAGAAGTACAAGGGCCTCATCAAGCTCCTGCAG
CGTCTCAACCGCATCGACCCCAAGGTTGCCCCGGAGGAGGTTCGTACGGC
TCTCAACTTCTTCCTTCGTCCGGGTAATCCGTATGGAAACAAGCCCGCCC
CCAGGACGGTGGATGAACAGGGCAAGGCCCGTGGTAAGGGCAAGCGCAAG
GCGTCCTCGGCGGTGGTGCAGCTGGTCGAGGGTGAGGGTGAAGTGTTGGT
GAACGGAAAGACGCTGAACGAGGCTTTCCCTCGTCTACATGACCGTGAGA
GTGCTGTCTGGCCTCTTCGGTGTACGTCACGGCTCGACAAGTATAACGTG
TGGGCTACCGTTCGCGGTGGAGGAGTGACCGGTCAGGCGGAGGCTATTAC
ATTGGCTGTTGCACGGGCTCTGCTGGTTCACGAACCTGCTCTTAAGCCTA
TCCTGCGGAAGGCTGGTGTGGTTACCGTGGATGCCCGTCGTGTGGAGAGA
AAGAAGCCCGGTCATGTCAAGGCCCGCAAGATGCCCACTTGGGTCAAGCG
GTGAATGGCCTGGCAAAGCCCCAATGGCCTTGTGCACGCCATGCACTCCA
TCCGTCGAACTGCTCAATTGCGGCCTTTTGTCCAGCGCTCCGTGATCTCC
GCATCATCCCCGGTCTCCTCTCCCTCCACGCCGGCTCTCCTCCAGCAATA
CAAGAATGCCCGCAGCTATGCGACAGAACTACAACCCGTTGCTGCTCCCC
CCATTGAGTTCTCCAAATTCCAGATCCAGCCTGCCCGCATTATCCCCGTG
TCGCCGGCCTACTTCTCCGGCAGCCCCAAGTTCTTCGACCACATGCTGAA
GCTGGAAGCCCTTCTGGCCAAGTATGCCGCACTACCCACGGTGTCTCCTA
GCGAAGCCCCCAGAATGGCCTGGTTCAAGCTGCTTCAGTTCCGTGATGCC
GTGGGCGAGCCCGTCCCGACCAAGAAGTACAAGGGCCTCATCAAGCTCCT
GCAGCGTCTCAACCGCATCGACCCCAAGGTTGCCCCGGAGGAGGTTCGTA
CGGCTCTCAACTTCTTCCTTCGTCCGGGTAATCCGTATGGAAACAAGCCC
GCCCCCAGGACGGTGGATGAACAGGGCAAGGCCCGTGGTAAGGGCAAGCG
CAAGGCGTCCTCGGCGGTGGTGCAGCTGGTCGAGGGTGAGGGTGAAGTGT
TGGTGAACGGAAAGACGCTGAACGAGGCTTTCCCTCGTCTACATGACCGT
GAGAGTGCTGTCTGGCCTCTTCGGTGTACGTCACGGCTCGACAAGTATAA
CGTGTGGGCTACCGTTCGCGGTGGAGGAGTGACCGGTCAGGCGGAGGCTA
TTACATTGGCTGTTGCACGGGCTCTGCTGGTTCACGAACCTGCTCTTAAG
CCTATCCTGCGGAAGGCTGGTGTGGTTACCGTGGATGCCCGTCGTGTGGA
GAGAAAGAAGCCCGGTCATGTCAAGGCCCGCAAGATGCCCACTTGGGTCA
AGCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009227CBS51388_009227Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009227-T1.exon1CBS51388_009227-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009227-T1.exon2CBS51388_009227-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009227-T1.cdsCBS51388_009227-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009227-T1CBS51388_009227-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263K05
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR020574
DBxrefInterPro:IPR014721
DBxrefInterPro:IPR000754
DBxrefPFAM:PF00380
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:212386..213413 +
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