You are here

Home

CBS51388_009240-T1, CBS51388_009240-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009240-T1
Unique NameCBS51388_009240-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:253273..255533-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009240-T1 ID=CBS51388_009240-T1|Name=CBS51388_009240-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2261bp|location=Sequence derived from alignment at An15:253273..255533- (Aspergillus niger CBS 513.88)
ATGTCGGGCAAGCGTCTGTTGGACGCGATCCAACTCTTCAATGTCGCCAA
GTCCGTGGCCGTGAAGCACCTCGAGGTGCGGCAGCGCCAGCTAGACTTAT
TTACCAGGACTTCGTCCCTCACCAAAGGCATCAAAAGCCAAGCGGATGGC
CTTTGTATGACCGCACAAGCTGCGGCAGCCCTAGCAAAGCGGTTCAATGA
TGATCCTTCTCCCCCCCAATCGGCATCCGCACCGCCACCCCGGTCCCCGA
GCTCATCCCCCACGCACACGAATCTCTCCCCGGATGAGGGCAGGAAAGCG
CAACGACAGGCAGAGTCACAGATCCCGTCGTCTACAGCAGAGACCACCGG
TTACGGAGCTAGTCAATTGGATGTTAGCCAGCAGCAAGATGTGTTCTATG
AACCCTCCACACACACAACCCCCGGCTCGTCTGGTCTTCCTAGGGTTAAG
CTACCTAAGACATCCAGCGACACGCAAACAGGCATCAATACTGAAATCAA
TGCGGACGTATTCCACTCCCCCGTCGGTGCCGAGAAAGCCGCGTCCACAA
CCCAGCCTACGGAACAACAGGAGGAGATTTCGGAGGATATGATGAAGGAG
ATATTCCACAGCCCCAAGGTTGCTAGGATGCTATCTCGGCAAGCTGCTGC
AGATCTCAGATACAAAGGAAGGTCCCCGACGCCTCCACCTGACGTCAAAC
CCATCGGGAAGGAGGGACTGTCGAAAGAAGAGGCCGAGGTGGTGGATGAA
ATTGTGTCAACAACAGCAGTAAGTGCAAGCAGCCGCAAGCAACCGGAAGT
CTATATCTAAAAAAGTGCCCGCAGGTGGAACCTGAGACTGCCGCAGCCAT
GAAGCAGCAGGCAACGTACCAGATGATTGAGTCTCGCGTTCCAGCTTCCC
GACTAGGCAGGCTATGGCAATACGGTGGCCTAGCCACATCCATGGCCTTT
GGCGCCGTCAGCGAAAGCCTCCGACGAGCCACAGGGAGCCAATCCGAAAG
CACCGGGTCCCTCATGTTCAGCGCAGGGAACATGGAACGTCTCGTAGCCA
AACTCTCCAAGATGCGTGGGGCGGCCCTCAAGCTGGGGCAGATGCTGAGC
ATCCAAGGTACACACCATCTAACCCCTAAACCAACCTCCCTCTAACACCC
CCCAGACAGCAAAATGCTCCCCGACTCCATTCACGAGGTCCTCCAACGAG
TCCAAGATCGCGCAGACTACATGCCCGCCTCGCAACGCGATAAAGTCCTG
ACCGACAATCTCGGTCCCAACTGGCGCGACCTCTTCTCCTCCTTCGACGA
AATCCCCATGGCAGCCGCCTCCATCGGCCAGGTCCACGGCGCTGTCCTCG
CCTCCACGGGACAACCCGTCGCCGTCAAAATCCAATACCCAGGCGTAGCC
GACTCCATTGACTCCGACCTCAACAACCTCTCCATCCTCCTAACCGCCTC
CCGCCTCCTCCCACGCGGCCTCTACCTCGACAAAACCATCGCCAACGCCC
GCACCGAACTCGCCTGGGAATGCGACTACCACCGCGAAGCCACCTGCGGC
GAGCACTTCCGCTCGCTCCTCGCCGACGACCCCGTCTTCCACATCCCCGC
CATCATCCCCGAAGCCTCGGGCAAACAAGTCCTCACAATGGAACGTCTCA
ACGGCATCGCCGTCACCAAAATCCAAACCTTCACCCAATCCCAACGCGAC
TGGATCGGCACCCAAATCCTCCGCCTGTGTCTTCGCGAAATCACCGAATT
CAAATACATGCAGACGGACCCCAACTGGACTAACTTCCTCTACAACGCCG
AGACGAACCGGCTCGAACTGCTTGATTTCGGCGCTTCGCGCGAATACCCC
GATGAGTTCATCACTAAGTATGTGAACACGCTGATCGCGGCAGCGAGGAA
CGATCGTCTACGCTGTGCGGAGCTGTCCCGCGAACTGGGATATCTTACTG
GCCATGAGAGTCAGGAGATGGTCGATGCGCACGTTACTTCCGTTATTACT
ATTGCAGAGCCGTTCATGGAGTCGTCGCCGGATGTGTATGACTTCAGAAA
TCAAACTATTACGGATCGCGTGAGGGGGTTGATTCCCCTTATGATTCGGG
AGAGGTTGACGCCTCCGCCGGAGGAGACGTATAGTTTGCATCGGAAGTTG
AGTGGGGCGTTTTTGTTGTGCGCGAGGTTGGGCAGTCGAGTGCCATGTAA
GGAGTTGTTTAGGGAGGCGGTTAGGAAGGCGCAGGTTGCGGGAACTATTG
AGAAGGTGTGA
back to top

Coding sequence (CDS) from alignment at An15:253273..255533-

>CBS51388_009240-T1 ID=CBS51388_009240-T1|Name=CBS51388_009240-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6471bp|location=Sequence derived from alignment at An15:253273..255533- (Aspergillus niger CBS 513.88)
ACAGCAAAATGCTCCCCGACTCCATTCACGAGGTCCTCCAACGAGTCCAA
GATCGCGCAGACTACATGCCCGCCTCGCAACGCGATAAAGTCCTGACCGA
CAATCTCGGTCCCAACTGGCGCGACCTCTTCTCCTCCTTCGACGAAATCC
CCATGGCAGCCGCCTCCATCGGCCAGGTCCACGGCGCTGTCCTCGCCTCC
ACGGGACAACCCGTCGCCGTCAAAATCCAATACCCAGGCGTAGCCGACTC
CATTGACTCCGACCTCAACAACCTCTCCATCCTCCTAACCGCCTCCCGCC
TCCTCCCACGCGGCCTCTACCTCGACAAAACCATCGCCAACGCCCGCACC
GAACTCGCCTGGGAATGCGACTACCACCGCGAAGCCACCTGCGGCGAGCA
CTTCCGCTCGCTCCTCGCCGACGACCCCGTCTTCCACATCCCCGCCATCA
TCCCCGAAGCCTCGGGCAAACAAGTCCTCACAATGGAACGTCTCAACGGC
ATCGCCGTCACCAAAATCCAAACCTTCACCCAATCCCAACGCGACTGGAT
CGGCACCCAAATCCTCCGCCTGTGTCTTCGCGAAATCACCGAATTCAAAT
ACATGCAGACGGACCCCAACTGGACTAACTTCCTCTACAACGCCGAGACG
AACCGGCTCGAACTGCTTGATTTCGGCGCTTCGCGCGAATACCCCGATGA
GTTCATCACTAAGTATGTGAACACGCTGATCGCGGCAGCGAGGAACGATC
GTCTACGCTGTGCGGAGCTGTCCCGCGAACTGGGATATCTTACTGGCCAT
GAGAGTCAGGAGATGGTCGATGCGCACGTTACTTCCGTTATTACTATTGC
AGAGCCGTTCATGGAGTCGTCGCCGGATGTGTATGACTTCAGAAATCAAA
CTATTACGGATCGCGTGAGGGGGTTGATTCCCCTTATGATTCGGGAGAGG
TTGACGCCTCCGCCGGAGGAGACGTATAGTTTGCATCGGAAGTTGAGTGG
GGCGTTTTTGTTGTGCGCGAGGTTGGGCAGTCGAGTGCCATGTAAGGAGT
TGTTTAGGGAGGCGGTTAGGAAGGCGCAGGTTGCGGGAACTATTGAGAAG
GTGTGAGTGGAACCTGAGACTGCCGCAGCCATGAAGCAGCAGGCAACGTA
CCAGATGATTGAGTCTCGCGTTCCAGCTTCCCGACTAGGCAGGCTATGGC
AATACGGTGGCCTAGCCACATCCATGGCCTTTGGCGCCGTCAGCGAAAGC
CTCCGACGAGCCACAGGGAGCCAATCCGAAAGCACCGGGTCCCTCATGTT
CAGCGCAGGGAACATGGAACGTCTCGTAGCCAAACTCTCCAAGATGCGTG
GGGCGGCCCTCAAGCTGGGGCAGATGCTGAGCATCCAAGATGTCGGGCAA
GCGTCTGTTGGACGCGATCCAACTCTTCAATGTCGCCAAGTCCGTGGCCG
TGAAGCACCTCGAGGTGCGGCAGCGCCAGCTAGACTTATTTACCAGGACT
TCGTCCCTCACCAAAGGCATCAAAAGCCAAGCGGATGGCCTTTGTATGAC
CGCACAAGCTGCGGCAGCCCTAGCAAAGCGGTTCAATGATGATCCTTCTC
CCCCCCAATCGGCATCCGCACCGCCACCCCGGTCCCCGAGCTCATCCCCC
ACGCACACGAATCTCTCCCCGGATGAGGGCAGGAAAGCGCAACGACAGGC
AGAGTCACAGATCCCGTCGTCTACAGCAGAGACCACCGGTTACGGAGCTA
GTCAATTGGATGTTAGCCAGCAGCAAGATGTGTTCTATGAACCCTCCACA
CACACAACCCCCGGCTCGTCTGGTCTTCCTAGGGTTAAGCTACCTAAGAC
ATCCAGCGACACGCAAACAGGCATCAATACTGAAATCAATGCGGACGTAT
TCCACTCCCCCGTCGGTGCCGAGAAAGCCGCGTCCACAACCCAGCCTACG
GAACAACAGGAGGAGATTTCGGAGGATATGATGAAGGAGATATTCCACAG
CCCCAAGGTTGCTAGGATGCTATCTCGGCAAGCTGCTGCAGATCTCAGAT
ACAAAGGAAGGTCCCCGACGCCTCCACCTGACGTCAAACCCATCGGGAAG
GAGGGACTGTCGAAAGAAGAGGCCGAGGTGGTGGATGAAATTGTGTCAAC
AACAGCAACAGCAAAATGCTCCCCGACTCCATTCACGAGGTCCTCCAACG
AGTCCAAGATCGCGCAGACTACATGCCCGCCTCGCAACGCGATAAAGTCC
TGACCGACAATCTCGGTCCCAACTGGCGCGACCTCTTCTCCTCCTTCGAC
GAAATCCCCATGGCAGCCGCCTCCATCGGCCAGGTCCACGGCGCTGTCCT
CGCCTCCACGGGACAACCCGTCGCCGTCAAAATCCAATACCCAGGCGTAG
CCGACTCCATTGACTCCGACCTCAACAACCTCTCCATCCTCCTAACCGCC
TCCCGCCTCCTCCCACGCGGCCTCTACCTCGACAAAACCATCGCCAACGC
CCGCACCGAACTCGCCTGGGAATGCGACTACCACCGCGAAGCCACCTGCG
GCGAGCACTTCCGCTCGCTCCTCGCCGACGACCCCGTCTTCCACATCCCC
GCCATCATCCCCGAAGCCTCGGGCAAACAAGTCCTCACAATGGAACGTCT
CAACGGCATCGCCGTCACCAAAATCCAAACCTTCACCCAATCCCAACGCG
ACTGGATCGGCACCCAAATCCTCCGCCTGTGTCTTCGCGAAATCACCGAA
TTCAAATACATGCAGACGGACCCCAACTGGACTAACTTCCTCTACAACGC
CGAGACGAACCGGCTCGAACTGCTTGATTTCGGCGCTTCGCGCGAATACC
CCGATGAGTTCATCACTAAGTATGTGAACACGCTGATCGCGGCAGCGAGG
AACGATCGTCTACGCTGTGCGGAGCTGTCCCGCGAACTGGGATATCTTAC
TGGCCATGAGAGTCAGGAGATGGTCGATGCGCACGTTACTTCCGTTATTA
CTATTGCAGAGCCGTTCATGGAGTCGTCGCCGGATGTGTATGACTTCAGA
AATCAAACTATTACGGATCGCGTGAGGGGGTTGATTCCCCTTATGATTCG
GGAGAGGTTGACGCCTCCGCCGGAGGAGACGTATAGTTTGCATCGGAAGT
TGAGTGGGGCGTTTTTGTTGTGCGCGAGGTTGGGCAGTCGAGTGCCATGT
AAGGAGTTGTTTAGGGAGGCGGTTAGGAAGGCGCAGGTTGCGGGAACTAT
TGAGAAGGTGTGAGTGGAACCTGAGACTGCCGCAGCCATGAAGCAGCAGG
CAACGTACCAGATGATTGAGTCTCGCGTTCCAGCTTCCCGACTAGGCAGG
CTATGGCAATACGGTGGCCTAGCCACATCCATGGCCTTTGGCGCCGTCAG
CGAAAGCCTCCGACGAGCCACAGGGAGCCAATCCGAAAGCACCGGGTCCC
TCATGTTCAGCGCAGGGAACATGGAACGTCTCGTAGCCAAACTCTCCAAG
ATGCGTGGGGCGGCCCTCAAGCTGGGGCAGATGCTGAGCATCCAAGATGT
CGGGCAAGCGTCTGTTGGACGCGATCCAACTCTTCAATGTCGCCAAGTCC
GTGGCCGTGAAGCACCTCGAGGTGCGGCAGCGCCAGCTAGACTTATTTAC
CAGGACTTCGTCCCTCACCAAAGGCATCAAAAGCCAAGCGGATGGCCTTT
GTATGACCGCACAAGCTGCGGCAGCCCTAGCAAAGCGGTTCAATGATGAT
CCTTCTCCCCCCCAATCGGCATCCGCACCGCCACCCCGGTCCCCGAGCTC
ATCCCCCACGCACACGAATCTCTCCCCGGATGAGGGCAGGAAAGCGCAAC
GACAGGCAGAGTCACAGATCCCGTCGTCTACAGCAGAGACCACCGGTTAC
GGAGCTAGTCAATTGGATGTTAGCCAGCAGCAAGATGTGTTCTATGAACC
CTCCACACACACAACCCCCGGCTCGTCTGGTCTTCCTAGGGTTAAGCTAC
CTAAGACATCCAGCGACACGCAAACAGGCATCAATACTGAAATCAATGCG
GACGTATTCCACTCCCCCGTCGGTGCCGAGAAAGCCGCGTCCACAACCCA
GCCTACGGAACAACAGGAGGAGATTTCGGAGGATATGATGAAGGAGATAT
TCCACAGCCCCAAGGTTGCTAGGATGCTATCTCGGCAAGCTGCTGCAGAT
CTCAGATACAAAGGAAGGTCCCCGACGCCTCCACCTGACGTCAAACCCAT
CGGGAAGGAGGGACTGTCGAAAGAAGAGGCCGAGGTGGTGGATGAAATTG
TGTCAACAACAGCAACAGCAAAATGCTCCCCGACTCCATTCACGAGGTCC
TCCAACGAGTCCAAGATCGCGCAGACTACATGCCCGCCTCGCAACGCGAT
AAAGTCCTGACCGACAATCTCGGTCCCAACTGGCGCGACCTCTTCTCCTC
CTTCGACGAAATCCCCATGGCAGCCGCCTCCATCGGCCAGGTCCACGGCG
CTGTCCTCGCCTCCACGGGACAACCCGTCGCCGTCAAAATCCAATACCCA
GGCGTAGCCGACTCCATTGACTCCGACCTCAACAACCTCTCCATCCTCCT
AACCGCCTCCCGCCTCCTCCCACGCGGCCTCTACCTCGACAAAACCATCG
CCAACGCCCGCACCGAACTCGCCTGGGAATGCGACTACCACCGCGAAGCC
ACCTGCGGCGAGCACTTCCGCTCGCTCCTCGCCGACGACCCCGTCTTCCA
CATCCCCGCCATCATCCCCGAAGCCTCGGGCAAACAAGTCCTCACAATGG
AACGTCTCAACGGCATCGCCGTCACCAAAATCCAAACCTTCACCCAATCC
CAACGCGACTGGATCGGCACCCAAATCCTCCGCCTGTGTCTTCGCGAAAT
CACCGAATTCAAATACATGCAGACGGACCCCAACTGGACTAACTTCCTCT
ACAACGCCGAGACGAACCGGCTCGAACTGCTTGATTTCGGCGCTTCGCGC
GAATACCCCGATGAGTTCATCACTAAGTATGTGAACACGCTGATCGCGGC
AGCGAGGAACGATCGTCTACGCTGTGCGGAGCTGTCCCGCGAACTGGGAT
ATCTTACTGGCCATGAGAGTCAGGAGATGGTCGATGCGCACGTTACTTCC
GTTATTACTATTGCAGAGCCGTTCATGGAGTCGTCGCCGGATGTGTATGA
CTTCAGAAATCAAACTATTACGGATCGCGTGAGGGGGTTGATTCCCCTTA
TGATTCGGGAGAGGTTGACGCCTCCGCCGGAGGAGACGTATAGTTTGCAT
CGGAAGTTGAGTGGGGCGTTTTTGTTGTGCGCGAGGTTGGGCAGTCGAGT
GCCATGTAAGGAGTTGTTTAGGGAGGCGGTTAGGAAGGCGCAGGTTGCGG
GAACTATTGAGAAGGTGTGAGTGGAACCTGAGACTGCCGCAGCCATGAAG
CAGCAGGCAACGTACCAGATGATTGAGTCTCGCGTTCCAGCTTCCCGACT
AGGCAGGCTATGGCAATACGGTGGCCTAGCCACATCCATGGCCTTTGGCG
CCGTCAGCGAAAGCCTCCGACGAGCCACAGGGAGCCAATCCGAAAGCACC
GGGTCCCTCATGTTCAGCGCAGGGAACATGGAACGTCTCGTAGCCAAACT
CTCCAAGATGCGTGGGGCGGCCCTCAAGCTGGGGCAGATGCTGAGCATCC
AAGATGTCGGGCAAGCGTCTGTTGGACGCGATCCAACTCTTCAATGTCGC
CAAGTCCGTGGCCGTGAAGCACCTCGAGGTGCGGCAGCGCCAGCTAGACT
TATTTACCAGGACTTCGTCCCTCACCAAAGGCATCAAAAGCCAAGCGGAT
GGCCTTTGTATGACCGCACAAGCTGCGGCAGCCCTAGCAAAGCGGTTCAA
TGATGATCCTTCTCCCCCCCAATCGGCATCCGCACCGCCACCCCGGTCCC
CGAGCTCATCCCCCACGCACACGAATCTCTCCCCGGATGAGGGCAGGAAA
GCGCAACGACAGGCAGAGTCACAGATCCCGTCGTCTACAGCAGAGACCAC
CGGTTACGGAGCTAGTCAATTGGATGTTAGCCAGCAGCAAGATGTGTTCT
ATGAACCCTCCACACACACAACCCCCGGCTCGTCTGGTCTTCCTAGGGTT
AAGCTACCTAAGACATCCAGCGACACGCAAACAGGCATCAATACTGAAAT
CAATGCGGACGTATTCCACTCCCCCGTCGGTGCCGAGAAAGCCGCGTCCA
CAACCCAGCCTACGGAACAACAGGAGGAGATTTCGGAGGATATGATGAAG
GAGATATTCCACAGCCCCAAGGTTGCTAGGATGCTATCTCGGCAAGCTGC
TGCAGATCTCAGATACAAAGGAAGGTCCCCGACGCCTCCACCTGACGTCA
AACCCATCGGGAAGGAGGGACTGTCGAAAGAAGAGGCCGAGGTGGTGGAT
GAAATTGTGTCAACAACAGCA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009240CBS51388_009240Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009240-T1CBS51388_009240-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009240-T1.cdsCBS51388_009240-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009240-T1.exon3CBS51388_009240-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009240-T1.exon2CBS51388_009240-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009240-T1.exon1CBS51388_009240-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262Z14
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR034646
DBxrefInterPro:IPR004147
DBxrefPFAM:PF03109
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:253273..255533 -
Powered by Drupal