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CBS51388_009243-T1, CBS51388_009243-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009243-T1
Unique NameCBS51388_009243-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:260315..262127+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009243-T1 ID=CBS51388_009243-T1|Name=CBS51388_009243-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1813bp|location=Sequence derived from alignment at An15:260315..262127+ (Aspergillus niger CBS 513.88)
ATGAAGTCCTTTTCCAGTTCGGCCATTAGTACGTTCTTTGTCTCCCCTCT
TCCCGTGTCCCGTCCCGCCTTATATACCTTCAACTGCTAACCATGCCTCC
TCTGCAGATAAGTCGGGCAAGAAATTTGCCCCCAAGGCGCCCGCTCGCCG
TCCTCCAGCTCCCGCTCCCCCGAGAAGACCCAGTGTAGCTTCCCAGCCAT
CTGCTTCTCAGACTCCCCAACCTCCGACAGAGACAGCAACTCCCGAACCA
GGTCCACCAGCCCCCGCTGTTCAACCCTCCGTTCCCACTCAGCCTTCAGT
TCCGGACGAGCCAACAGTTTCTCCCAAGGAAAATGTCATTGTACCTCAGA
CTGCGACAGCCATTCCAATCCCTCGCCCTAAGCGCAAGGCTTCGGTGTCT
GCAGTCTCCCCAGGAACCATAGAACATGAACCTACCCCGCCTACACCTAC
CGCACCGGAACCCCAAGTCGAGCAGATACAGGCTCCTGCGAGTGATACTC
CGACTGCTGCGCCCGAGACACAGATATCCCGCCCCGATAATGACGCGACA
GTGATTCGTCCATCCAAACGTCCCAAGACCACTGGAGAATCCACCGCCAT
CACCACCGATGCCGTCACCACCGTTTCCGCTCCTTCTGCTGCTGCTGCTC
CTCCTCCTCTTCCTGCTACAATCACGCGCACAACCGAATCCATTGCGATA
GACGCCAACCCCCAACTCGTTACTCCTCCAGCAACGCAGGCGGCACTTAC
TGATAGCGAGGGAACTGCAGATGCGCGCCCTAGAGCCGACTCGCAGGTTA
CTACTGCCGAACAAGGTCGAAAGACAACGAGGGCTAGACGAAGATCAGTG
AAGGATGTCAATGGGGAAAATGCGACAAAGAAGAAGGAAAGAAAGCCTCG
GACACGCAAGAAGCGCGAGCCGACCCCCGAAGGCGCCGAATCCGTCGAGA
TCGCCCCCGCAATGGTCAAGATGTCGGAGCTGTGCAAGGATTTGCGCACG
GGTAAAATGTCCAAGCGAGAGACTGAGCTGCGCAACATGGAACAGGCTGA
GCAGGAGCGTAAGCAAAAAGCGCAGCAGGAAGGTGATACCGAGGCACCGG
TGAAAGAGAACGGGAACGACGCGTCTCCCGCGGAAGACCGGGATGAGAAC
CCAGACAACAAGGGACAGGCTGGACCAGTGATGAGGATTGTTAACGGAGA
GATTGTGCTCGATACTGCTTCATTGCAGGTGGATCGCCATGCCGATGCCG
CAAGGAATGCTGGGGAACTTGAAGATGTAATTGAAAACTCGTTTACTCGG
AAGATCAATCAGGCGACATATGGAAAACGCTCCAAGACTGAGTCCTGGGA
CGAGGAAATGACCGACCTTTTCTACCGGGGCTTGCGCATGTTTGGTACAG
ACTTCATGATGATCAGCAAGTTGTTCCCGGGCCGTTCCCGGCGCCAGATC
AAGCTCAAGTTCAACAACGAAGAACGTCGTGACCCCCAGCGTATCAAAGA
AACACTGCTGGGCCCACGCGAGACCATCGACATCAGTACCTACTCGGAGA
TGACCAACACTGTCTACGACGACCCCAGGTTAATCCAACAGGAGTTAGAC
GAGGAGCGGAAGCGAATTGAGGCTCAGCACGCCAAAGAGAAGGAAGCGCA
GGAAGAGATGCTTCGTAATCCTGACGGTGCGGCCGGTGGTGCCGACGGCA
CTCAGGGCAACGACGTGCCTGTCAAAGCGAAGCGGAACAACAGAAAACAA
GCCATGAAAGCCATGGCCGGTGGCACTGAAGAAGTTTTGGGCACCATTGA
TGATATACCTTGA
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Coding sequence (CDS) from alignment at An15:260315..262127+

>CBS51388_009243-T1 ID=CBS51388_009243-T1|Name=CBS51388_009243-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3468bp|location=Sequence derived from alignment at An15:260315..262127+ (Aspergillus niger CBS 513.88)
ATGAAGTCCTTTTCCAGTTCGGCCATTAATAAGTCGGGCAAGAAATTTGC
CCCCAAGGCGCCCGCTCGCCGTCCTCCAGCTCCCGCTCCCCCGAGAAGAC
CCAGTGTAGCTTCCCAGCCATCTGCTTCTCAGACTCCCCAACCTCCGACA
GAGACAGCAACTCCCGAACCAGGTCCACCAGCCCCCGCTGTTCAACCCTC
CGTTCCCACTCAGCCTTCAGTTCCGGACGAGCCAACAGTTTCTCCCAAGG
AAAATGTCATTGTACCTCAGACTGCGACAGCCATTCCAATCCCTCGCCCT
AAGCGCAAGGCTTCGGTGTCTGCAGTCTCCCCAGGAACCATAGAACATGA
ACCTACCCCGCCTACACCTACCGCACCGGAACCCCAAGTCGAGCAGATAC
AGGCTCCTGCGAGTGATACTCCGACTGCTGCGCCCGAGACACAGATATCC
CGCCCCGATAATGACGCGACAGTGATTCGTCCATCCAAACGTCCCAAGAC
CACTGGAGAATCCACCGCCATCACCACCGATGCCGTCACCACCGTTTCCG
CTCCTTCTGCTGCTGCTGCTCCTCCTCCTCTTCCTGCTACAATCACGCGC
ACAACCGAATCCATTGCGATAGACGCCAACCCCCAACTCGTTACTCCTCC
AGCAACGCAGGCGGCACTTACTGATAGCGAGGGAACTGCAGATGCGCGCC
CTAGAGCCGACTCGCAGGTTACTACTGCCGAACAAGGTCGAAAGACAACG
AGGGCTAGACGAAGATCAGTGAAGGATGTCAATGGGGAAAATGCGACAAA
GAAGAAGGAAAGAAAGCCTCGGACACGCAAGAAGCGCGAGCCGACCCCCG
AAGGCGCCGAATCCGTCGAGATCGCCCCCGCAATGGTCAAGATGTCGGAG
CTGTGCAAGGATTTGCGCACGGGTAAAATGTCCAAGCGAGAGACTGAGCT
GCGCAACATGGAACAGGCTGAGCAGGAGCGTAAGCAAAAAGCGCAGCAGG
AAGGTGATACCGAGGCACCGGTGAAAGAGAACGGGAACGACGCGTCTCCC
GCGGAAGACCGGGATGAGAACCCAGACAACAAGGGACAGGCTGGACCAGT
GATGAGGATTGTTAACGGAGAGATTGTGCTCGATACTGCTTCATTGCAGG
TGGATCGCCATGCCGATGCCGCAAGGAATGCTGGGGAACTTGAAGATGTA
ATTGAAAACTCGTTTACTCGGAAGATCAATCAGGCGACATATGGAAAACG
CTCCAAGACTGAGTCCTGGGACGAGGAAATGACCGACCTTTTCTACCGGG
GCTTGCGCATGTTTGGTACAGACTTCATGATGATCAGCAAGTTGTTCCCG
GGCCGTTCCCGGCGCCAGATCAAGCTCAAGTTCAACAACGAAGAACGTCG
TGACCCCCAGCGTATCAAAGAAACACTGCTGGGCCCACGCGAGACCATCG
ACATCAGTACCTACTCGGAGATGACCAACACTGTCTACGACGACCCCAGG
TTAATCCAACAGGAGTTAGACGAGGAGCGGAAGCGAATTGAGGCTCAGCA
CGCCAAAGAGAAGGAAGCGCAGGAAGAGATGCTTCGTAATCCTGACGGTG
CGGCCGGTGGTGCCGACGGCACTCAGGGCAACGACGTGCCTGTCAAAGCG
AAGCGGAACAACAGAAAACAAGCCATGAAAGCCATGGCCGGTGGCACTGA
AGAAGTTTTGGGCACCATTGATGATATACCTTGAATGAAGTCCTTTTCCA
GTTCGGCCATTAATAAGTCGGGCAAGAAATTTGCCCCCAAGGCGCCCGCT
CGCCGTCCTCCAGCTCCCGCTCCCCCGAGAAGACCCAGTGTAGCTTCCCA
GCCATCTGCTTCTCAGACTCCCCAACCTCCGACAGAGACAGCAACTCCCG
AACCAGGTCCACCAGCCCCCGCTGTTCAACCCTCCGTTCCCACTCAGCCT
TCAGTTCCGGACGAGCCAACAGTTTCTCCCAAGGAAAATGTCATTGTACC
TCAGACTGCGACAGCCATTCCAATCCCTCGCCCTAAGCGCAAGGCTTCGG
TGTCTGCAGTCTCCCCAGGAACCATAGAACATGAACCTACCCCGCCTACA
CCTACCGCACCGGAACCCCAAGTCGAGCAGATACAGGCTCCTGCGAGTGA
TACTCCGACTGCTGCGCCCGAGACACAGATATCCCGCCCCGATAATGACG
CGACAGTGATTCGTCCATCCAAACGTCCCAAGACCACTGGAGAATCCACC
GCCATCACCACCGATGCCGTCACCACCGTTTCCGCTCCTTCTGCTGCTGC
TGCTCCTCCTCCTCTTCCTGCTACAATCACGCGCACAACCGAATCCATTG
CGATAGACGCCAACCCCCAACTCGTTACTCCTCCAGCAACGCAGGCGGCA
CTTACTGATAGCGAGGGAACTGCAGATGCGCGCCCTAGAGCCGACTCGCA
GGTTACTACTGCCGAACAAGGTCGAAAGACAACGAGGGCTAGACGAAGAT
CAGTGAAGGATGTCAATGGGGAAAATGCGACAAAGAAGAAGGAAAGAAAG
CCTCGGACACGCAAGAAGCGCGAGCCGACCCCCGAAGGCGCCGAATCCGT
CGAGATCGCCCCCGCAATGGTCAAGATGTCGGAGCTGTGCAAGGATTTGC
GCACGGGTAAAATGTCCAAGCGAGAGACTGAGCTGCGCAACATGGAACAG
GCTGAGCAGGAGCGTAAGCAAAAAGCGCAGCAGGAAGGTGATACCGAGGC
ACCGGTGAAAGAGAACGGGAACGACGCGTCTCCCGCGGAAGACCGGGATG
AGAACCCAGACAACAAGGGACAGGCTGGACCAGTGATGAGGATTGTTAAC
GGAGAGATTGTGCTCGATACTGCTTCATTGCAGGTGGATCGCCATGCCGA
TGCCGCAAGGAATGCTGGGGAACTTGAAGATGTAATTGAAAACTCGTTTA
CTCGGAAGATCAATCAGGCGACATATGGAAAACGCTCCAAGACTGAGTCC
TGGGACGAGGAAATGACCGACCTTTTCTACCGGGGCTTGCGCATGTTTGG
TACAGACTTCATGATGATCAGCAAGTTGTTCCCGGGCCGTTCCCGGCGCC
AGATCAAGCTCAAGTTCAACAACGAAGAACGTCGTGACCCCCAGCGTATC
AAAGAAACACTGCTGGGCCCACGCGAGACCATCGACATCAGTACCTACTC
GGAGATGACCAACACTGTCTACGACGACCCCAGGTTAATCCAACAGGAGT
TAGACGAGGAGCGGAAGCGAATTGAGGCTCAGCACGCCAAAGAGAAGGAA
GCGCAGGAAGAGATGCTTCGTAATCCTGACGGTGCGGCCGGTGGTGCCGA
CGGCACTCAGGGCAACGACGTGCCTGTCAAAGCGAAGCGGAACAACAGAA
AACAAGCCATGAAAGCCATGGCCGGTGGCACTGAAGAAGTTTTGGGCACC
ATTGATGATATACCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000126transcription factor TFIIIB complex
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000995RNA polymerase III general transcription initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006383transcription by RNA polymerase III
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009243CBS51388_009243Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009243-T1.exon1CBS51388_009243-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009243-T1.exon2CBS51388_009243-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009243-T1.cdsCBS51388_009243-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009243-T1CBS51388_009243-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265C25
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017174
DBxrefInterPro:IPR039467
DBxrefInterPro:IPR001005
DBxrefPFAM:PF15963
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:260315..262127 +
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