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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:381951..382985+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009277-T1 ID=CBS51388_009277-T1|Name=CBS51388_009277-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1035bp|location=Sequence derived from alignment at An15:381951..382985+ (Aspergillus niger CBS 513.88) ATGGTTAGGTCAACACAGATTGCCAGAATTGATGGTAAGATGCTGTCCGG
AGCTTGTTCAGGGGGAACAGAGTGAGGGGTGAGCCAAGTGTGCCGTTTAC
TGATATTACGAGACAGGCTTGATGCTGGCGGCATCGGTGGATGATGAGCA
GGTTAGTTTGGTTCAGGGCGCATTCACTGCTCTATTGTTGCTTGATAACT
GACAATGGGATTCCTGGTGTTCTTCTCTAGGCTGAAGTGGAGCTCTCTGA
GATCAAGTCTCAGGCTAAGATGATCTTTCGCCGATTGAATCGCAATTCGG
CGCCGCAAGCCAGTATTGAGTCCGGTCAATTTAATCTACAGTATGTCTGA
CATTTTGGAATTTGTACGACGCAAAAACTAGTCAGTGCAGTTGGCTAAAG
ACCGGTGTTAGCTATCTTATCAAGGATGATATCTGCTTCCTTTGCATATG
CGATCACTCCTATCCGCGCAAGCTTGCATTCACCTATCTAGCCGATCTCG
CAACCGAGTTCACTACGACGTATTCCCCGACACAGTATCAATCTCCGACT
CTGCGCCCATATGCCTTTGTGGAATTCGACACTTTCATTCAGCGCACCAA
AAAGCTCTACCAGGATAGCCGCGCATCGCAAAATCTCGACCGTCTGAACG
ATGAGCTCCGGGACGTGACGAAAGTGATGACCAAGAACATCGAGGACCTT
CTATACAGAGGCGATAGCTTGGAGAGGATGGGCGAATTGTCGGGCCGTCT
ACGGGAAGACAGCAAGAAGTACAGAAAGGCCGCGGTACGGATCAACTGGG
AGTTGTTGGTCAAACAGGTAGGTTCAATGTTGATGTGACGGCAGACTTGA
CGCTAACCTGTCGCAGTACGGACCTGTCGCAGGTGTTGGGTTTATCTTCC
TTTTCCTCATTTGGTGGCGCTTCTTTTAATTGCGGGCAAAGCGGCTCCGA
AACTCGATACCCGCTAATATGATTGTATGCATAGATAATGTCTCTGGTGG
TTGCAGGACACCATCCCCCTAAGCCCAGGACTTAA back to topCoding sequence (CDS) from alignment at An15:381951..382985+ >CBS51388_009277-T1 ID=CBS51388_009277-T1|Name=CBS51388_009277-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3180bp|location=Sequence derived from alignment at An15:381951..382985+ (Aspergillus niger CBS 513.88) ATGGTTAGGTCAACACAGATTGCCAGAATTGATGGCTTGATGCTGGCGGC ATCGGTGGATGATGAGCAGGCTGAAGTGGAGCTCTCTGAGATCAAGTCTC AGGCTAAGATGATCTTTCGCCGATTGAATCGCAATTCGGCGCCGCAAGCC AGTATTGAGTCCGGTCAATTTAATCTACACTATCTTATCAAGGATGATAT CTGCTTCCTTTGCATATGCGATCACTCCTATCCGCGCAAGCTTGCATTCA CCTATCTAGCCGATCTCGCAACCGAGTTCACTACGACGTATTCCCCGACA CAGTATCAATCTCCGACTCTGCGCCCATATGCCTTTGTGGAATTCGACAC TTTCATTCAGCGCACCAAAAAGCTCTACCAGGATAGCCGCGCATCGCAAA ATCTCGACCGTCTGAACGATGAGCTCCGGGACGTGACGAAAGTGATGACC AAGAACATCGAGGACCTTCTATACAGAGGCGATAGCTTGGAGAGGATGGG CGAATTGTCGGGCCGTCTACGGGAAGACAGCAAGAAGTACAGAAAGGCCG CGGTACGGATCAACTGGGAGTTGTTGGTCAAACAGATAATGTCTCTGGTG GTTGCAGGACACCATCCCCCTAAGCCCAGGACTTAAATGGTTAGGTCAAC ACAGATTGCCAGAATTGATGGCTTGATGCTGGCGGCATCGGTGGATGATG AGCAGGCTGAAGTGGAGCTCTCTGAGATCAAGTCTCAGGCTAAGATGATC TTTCGCCGATTGAATCGCAATTCGGCGCCGCAAGCCAGTATTGAGTCCGG TCAATTTAATCTACACTATCTTATCAAGGATGATATCTGCTTCCTTTGCA TATGCGATCACTCCTATCCGCGCAAGCTTGCATTCACCTATCTAGCCGAT CTCGCAACCGAGTTCACTACGACGTATTCCCCGACACAGTATCAATCTCC GACTCTGCGCCCATATGCCTTTGTGGAATTCGACACTTTCATTCAGCGCA CCAAAAAGCTCTACCAGGATAGCCGCGCATCGCAAAATCTCGACCGTCTG AACGATGAGCTCCGGGACGTGACGAAAGTGATGACCAAGAACATCGAGGA CCTTCTATACAGAGGCGATAGCTTGGAGAGGATGGGCGAATTGTCGGGCC GTCTACGGGAAGACAGCAAGAAGTACAGAAAGGCCGCGGTACGGATCAAC TGGGAGTTGTTGGTCAAACAGATAATGTCTCTGGTGGTTGCAGGACACCA TCCCCCTAAGCCCAGGACTTAAATGGTTAGGTCAACACAGATTGCCAGAA TTGATGGCTTGATGCTGGCGGCATCGGTGGATGATGAGCAGGCTGAAGTG GAGCTCTCTGAGATCAAGTCTCAGGCTAAGATGATCTTTCGCCGATTGAA TCGCAATTCGGCGCCGCAAGCCAGTATTGAGTCCGGTCAATTTAATCTAC ACTATCTTATCAAGGATGATATCTGCTTCCTTTGCATATGCGATCACTCC TATCCGCGCAAGCTTGCATTCACCTATCTAGCCGATCTCGCAACCGAGTT CACTACGACGTATTCCCCGACACAGTATCAATCTCCGACTCTGCGCCCAT ATGCCTTTGTGGAATTCGACACTTTCATTCAGCGCACCAAAAAGCTCTAC CAGGATAGCCGCGCATCGCAAAATCTCGACCGTCTGAACGATGAGCTCCG GGACGTGACGAAAGTGATGACCAAGAACATCGAGGACCTTCTATACAGAG GCGATAGCTTGGAGAGGATGGGCGAATTGTCGGGCCGTCTACGGGAAGAC AGCAAGAAGTACAGAAAGGCCGCGGTACGGATCAACTGGGAGTTGTTGGT CAAACAGATAATGTCTCTGGTGGTTGCAGGACACCATCCCCCTAAGCCCA GGACTTAAATGGTTAGGTCAACACAGATTGCCAGAATTGATGGCTTGATG CTGGCGGCATCGGTGGATGATGAGCAGGCTGAAGTGGAGCTCTCTGAGAT CAAGTCTCAGGCTAAGATGATCTTTCGCCGATTGAATCGCAATTCGGCGC CGCAAGCCAGTATTGAGTCCGGTCAATTTAATCTACACTATCTTATCAAG GATGATATCTGCTTCCTTTGCATATGCGATCACTCCTATCCGCGCAAGCT TGCATTCACCTATCTAGCCGATCTCGCAACCGAGTTCACTACGACGTATT CCCCGACACAGTATCAATCTCCGACTCTGCGCCCATATGCCTTTGTGGAA TTCGACACTTTCATTCAGCGCACCAAAAAGCTCTACCAGGATAGCCGCGC ATCGCAAAATCTCGACCGTCTGAACGATGAGCTCCGGGACGTGACGAAAG TGATGACCAAGAACATCGAGGACCTTCTATACAGAGGCGATAGCTTGGAG AGGATGGGCGAATTGTCGGGCCGTCTACGGGAAGACAGCAAGAAGTACAG AAAGGCCGCGGTACGGATCAACTGGGAGTTGTTGGTCAAACAGATAATGT CTCTGGTGGTTGCAGGACACCATCCCCCTAAGCCCAGGACTTAAATGGTT AGGTCAACACAGATTGCCAGAATTGATGGCTTGATGCTGGCGGCATCGGT GGATGATGAGCAGGCTGAAGTGGAGCTCTCTGAGATCAAGTCTCAGGCTA AGATGATCTTTCGCCGATTGAATCGCAATTCGGCGCCGCAAGCCAGTATT GAGTCCGGTCAATTTAATCTACACTATCTTATCAAGGATGATATCTGCTT CCTTTGCATATGCGATCACTCCTATCCGCGCAAGCTTGCATTCACCTATC TAGCCGATCTCGCAACCGAGTTCACTACGACGTATTCCCCGACACAGTAT CAATCTCCGACTCTGCGCCCATATGCCTTTGTGGAATTCGACACTTTCAT TCAGCGCACCAAAAAGCTCTACCAGGATAGCCGCGCATCGCAAAATCTCG ACCGTCTGAACGATGAGCTCCGGGACGTGACGAAAGTGATGACCAAGAAC ATCGAGGACCTTCTATACAGAGGCGATAGCTTGGAGAGGATGGGCGAATT GTCGGGCCGTCTACGGGAAGACAGCAAGAAGTACAGAAAGGCCGCGGTAC GGATCAACTGGGAGTTGTTGGTCAAACAGATAATGTCTCTGGTGGTTGCA GGACACCATCCCCCTAAGCCCAGGACTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09264IG5 |
DBxref | InterPro:IPR011012 |
DBxref | InterPro:IPR042855 |
DBxref | InterPro:IPR001388 |
DBxref | InterPro:IPR010908 |
DBxref | PFAM:PF00957 |
DBxref | PFAM:PF13774 |
Product | SNAP receptor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An15 | supercontig | An15:381951..382985 + |
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