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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:385837..386614+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009279-T1 ID=CBS51388_009279-T1|Name=CBS51388_009279-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=778bp|location=Sequence derived from alignment at An15:385837..386614+ (Aspergillus niger CBS 513.88)
ATGACGGAACCACCAGCGAAACGTGCTCGCCGAGTCGATAGCTCAGCTAT
GTGGGACCAAGATGACCGGAGGACACGTTCACCCGAATTAGAACCAGATT
ATACCAGAAGCCCTCGACGGGACCATGTTGCGAGAGATGATGGACGACGC
GATGGGCCTCGTGATGATCGGAGATACCGTTCTCGCTCCAGGGACCGGAG
AGACAGGAGGCGAGATAGAAGCCGGTCGAGGGATCGCCGCGACCGCGACC
GCAGAGACAGAGACGGACGGGGAATGAGGGATAGGGAAAGAAGTGTCAGT
CGGGATAGGCACTATGATAGACGCGGTATGTCGGAGATAAGAATCAAAAC
TCTTTAAACTACGGATGCTAACAACGCATGAAGGCTATCCTTCAAAAGGA
GACAGGTACAGGTCGCGATCACCTATTCCGAACGGCAACAGGGACCGGTC
GCGGACGCCGCCACCTCGCGGACCCCGGAGCGACCGCAGGCACGACCGCA
GGGACCATAGAGGACAGACAAACGGTGCTACGGATGCGAAGTCAGGAGGG
AACCGGTTCAAAGACGAAATGGAGGTGGACAGTGACGGAGCTGTTGGAGA
AGACGATGTCGAGGAAATGATGCGCCGCAGCATGGGATTCACGAAATTCA
GGAGCACGAAGAATACCAAGGTCCCCGGGAACGACATTTACGGAGTCCGC
AAGGAGAAGAAGACGGAGTACAGACAGTACATGAATCGTGTCGGAGGATT
CAACAGACCTCTCAGTCCCTCGAGGTAA back to topCoding sequence (CDS) from alignment at An15:385837..386614+ >CBS51388_009279-T1 ID=CBS51388_009279-T1|Name=CBS51388_009279-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1440bp|location=Sequence derived from alignment at An15:385837..386614+ (Aspergillus niger CBS 513.88)
ATGACGGAACCACCAGCGAAACGTGCTCGCCGAGTCGATAGCTCAGCTAT
GTGGGACCAAGATGACCGGAGGACACGTTCACCCGAATTAGAACCAGATT
ATACCAGAAGCCCTCGACGGGACCATGTTGCGAGAGATGATGGACGACGC
GATGGGCCTCGTGATGATCGGAGATACCGTTCTCGCTCCAGGGACCGGAG
AGACAGGAGGCGAGATAGAAGCCGGTCGAGGGATCGCCGCGACCGCGACC
GCAGAGACAGAGACGGACGGGGAATGAGGGATAGGGAAAGAAGTGTCAGT
CGGGATAGGCACTATGATAGACGCGGCTATCCTTCAAAAGGAGACAGGTA
CAGGTCGCGATCACCTATTCCGAACGGCAACAGGGACCGGTCGCGGACGC
CGCCACCTCGCGGACCCCGGAGCGACCGCAGGCACGACCGCAGGGACCAT
AGAGGACAGACAAACGGTGCTACGGATGCGAAGTCAGGAGGGAACCGGTT
CAAAGACGAAATGGAGGTGGACAGTGACGGAGCTGTTGGAGAAGACGATG
TCGAGGAAATGATGCGCCGCAGCATGGGATTCACGAAATTCAGGAGCACG
AAGAATACCAAGGTCCCCGGGAACGACATTTACGGAGTCCGCAAGGAGAA
GAAGACGGAGTACAGACAGTACATGAATCGTGTCGGAGGATTCAACAGAC
CTCTCAGTCCCTCGAGGTAAATGACGGAACCACCAGCGAAACGTGCTCGC
CGAGTCGATAGCTCAGCTATGTGGGACCAAGATGACCGGAGGACACGTTC
ACCCGAATTAGAACCAGATTATACCAGAAGCCCTCGACGGGACCATGTTG
CGAGAGATGATGGACGACGCGATGGGCCTCGTGATGATCGGAGATACCGT
TCTCGCTCCAGGGACCGGAGAGACAGGAGGCGAGATAGAAGCCGGTCGAG
GGATCGCCGCGACCGCGACCGCAGAGACAGAGACGGACGGGGAATGAGGG
ATAGGGAAAGAAGTGTCAGTCGGGATAGGCACTATGATAGACGCGGCTAT
CCTTCAAAAGGAGACAGGTACAGGTCGCGATCACCTATTCCGAACGGCAA
CAGGGACCGGTCGCGGACGCCGCCACCTCGCGGACCCCGGAGCGACCGCA
GGCACGACCGCAGGGACCATAGAGGACAGACAAACGGTGCTACGGATGCG
AAGTCAGGAGGGAACCGGTTCAAAGACGAAATGGAGGTGGACAGTGACGG
AGCTGTTGGAGAAGACGATGTCGAGGAAATGATGCGCCGCAGCATGGGAT
TCACGAAATTCAGGAGCACGAAGAATACCAAGGTCCCCGGGAACGACATT
TACGGAGTCCGCAAGGAGAAGAAGACGGAGTACAGACAGTACATGAATCG
TGTCGGAGGATTCAACAGACCTCTCAGTCCCTCGAGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008380 | RNA splicing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013957 |
| DBxref | PFAM:PF08648 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:385837..386614 + |
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