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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:396609..398441- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009284-T1 ID=CBS51388_009284-T1|Name=CBS51388_009284-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1833bp|location=Sequence derived from alignment at An15:396609..398441- (Aspergillus niger CBS 513.88)
ATGACAGAGTTGGACTCGCTTCCAGAAGATGAGCGCTCGGTGGAGTTATC
ATCCATTGCTGCCATCTACCCCGAGATCAAGATAGATCCGTCCTCGCCAT
TCAAAGCATCCCTCACCCTACCGGTTAAGCCATCTGCTCCCCTGCGTGTC
TGCTTCCAGCAACAATCCGAGACAGAGTTCCCCGCCGTACTAACTCCTCC
CACGTCGGTTGATGCCAACGATCCTGGCTTTCCTTTCAAGACAGGTGACC
ATAACTCCGCTAGCCTCAATCGCGATAGTCATACACTCTCACATCTTCCT
CCCATCTGCCTCGAAATCGAGCTGCCCCAAGGTTACCCTTCCGAAGAACC
GCCCATTTTCAGGCTTGAAACAAACCCTCCGTGGTTGCCACCTTCTATAT
TGTCAGGTCTTTTGGATGACGGAAAACGTCTTTGGGAGGAATGTGGCAAG
GACCTCGTGGTATACACATATATTGACCATCTTCAGCAACTTGGGGAGTC
AGCTTTTGGGGTTGGCGACATATCCGGTGGCGAAGTTCAACTTCCCCGTG
AGTTAAAGATCGCATTGCTAGACTTCAACAACAAAGCCGAACGGGAAAGG
TTCGAGGAGGAGACCTTTGAGTGTGGAGTCTGTCTCGAACCCAAGAAGGG
CACGATTTGCCACCGACTCGTACTTTGTGGGCATATCTTCTGCGTGCCTT
GTCTCCAAGACTTCTACAACTCTTGTATAACGGAAGGCGACGTCGAAGGT
GTCAAGTGTTTGGCTCCTGGTTGTGGTAAAGAATCAAACAGTACCTCTCC
CACCGACGCCCGTCCGAAGAAACACAAAAAGCAAGATCGAACCCTGAGCC
CCAGCGAGCTTCTTCAGATCCCGTTAGAACAAGAGACAGTGCAGCGTTAC
GTTTTCCTGAAACGGAAGAAGAAGCTCGAGGCGGACAAGTCGACTGTGTA
TTGCCCACGGCAGTGGTGTCAAGGAGCCGCACGATCCAAGAGACACCCCA
AGCCTGTTGATCCAATGACAGATGACCTCGATGACGAAGATGACGAAGAT
GAAGAGGGACCCGTGTTCGATCCCTTAGGGGAGGAGGCTCAGCTACCACC
AATGTCCGAGCGCGTCGCCATCTGCGAAGATTGCAACTATGCCTTCTGTT
GTGTTTGCAAGAAGGGCTGGCATGGCGAACTCGTACGGTGCTTCCCTCGC
CGCGAAGCAGAGCTCTCGGCCGAGGAGAAAGCAACGGAGGAGTATCTGCG
TATGTACACCTCGGCATGTCCGACATGCGATGCTCCATGCCAGAAGCAAA
TGGGTTGCAATCATATGATATGTTTCAAATGCGACACCCACTTCTGCTAT
CTCTGCTCTAGTTGGCTCTGCGAAGACAACCCTTACCGCCATTTCAACGA
CATCAACAGTGGATGTTTCAATCGACTGTGGGATCTGGAAGGTGGCGATG
GGATCAATCCCGATGGAGCCGCAGCCTTGCATCGTGTACCCGACGAACTG
CTGGACTTCGACGATGGCAGCGATGACGAGGACCTCGTTGCTTGGGAACT
CGGCAGACGACCTCCACCTCCTGCTCCGGTCCCTCCAAGAGTCAACAACG
GCGCAGCTGGAGGTAATCGCCATCGTGGGAACAACGCCAATGATCTCGAC
GCCGCAGGTCGAGCAGCCGCAGCTGAAAGACAAGCTCAAGCACGAGCAAT
GGCCGAGGTCCGCCGTCGTCCAGATGGCGAGCCTCCCCAAGTCAGACGCC
CGGGACTCCAGAGGTTTCTGGACCTGGTCCTGAATGACCGGGAAGACGAA
TGGGACAGTGACGAGCTAGATGATGATTTCTAG back to topCoding sequence (CDS) from alignment at An15:396609..398441- >CBS51388_009284-T1 ID=CBS51388_009284-T1|Name=CBS51388_009284-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1833bp|location=Sequence derived from alignment at An15:396609..398441- (Aspergillus niger CBS 513.88)
ATGACAGAGTTGGACTCGCTTCCAGAAGATGAGCGCTCGGTGGAGTTATC
ATCCATTGCTGCCATCTACCCCGAGATCAAGATAGATCCGTCCTCGCCAT
TCAAAGCATCCCTCACCCTACCGGTTAAGCCATCTGCTCCCCTGCGTGTC
TGCTTCCAGCAACAATCCGAGACAGAGTTCCCCGCCGTACTAACTCCTCC
CACGTCGGTTGATGCCAACGATCCTGGCTTTCCTTTCAAGACAGGTGACC
ATAACTCCGCTAGCCTCAATCGCGATAGTCATACACTCTCACATCTTCCT
CCCATCTGCCTCGAAATCGAGCTGCCCCAAGGTTACCCTTCCGAAGAACC
GCCCATTTTCAGGCTTGAAACAAACCCTCCGTGGTTGCCACCTTCTATAT
TGTCAGGTCTTTTGGATGACGGAAAACGTCTTTGGGAGGAATGTGGCAAG
GACCTCGTGGTATACACATATATTGACCATCTTCAGCAACTTGGGGAGTC
AGCTTTTGGGGTTGGCGACATATCCGGTGGCGAAGTTCAACTTCCCCGTG
AGTTAAAGATCGCATTGCTAGACTTCAACAACAAAGCCGAACGGGAAAGG
TTCGAGGAGGAGACCTTTGAGTGTGGAGTCTGTCTCGAACCCAAGAAGGG
CACGATTTGCCACCGACTCGTACTTTGTGGGCATATCTTCTGCGTGCCTT
GTCTCCAAGACTTCTACAACTCTTGTATAACGGAAGGCGACGTCGAAGGT
GTCAAGTGTTTGGCTCCTGGTTGTGGTAAAGAATCAAACAGTACCTCTCC
CACCGACGCCCGTCCGAAGAAACACAAAAAGCAAGATCGAACCCTGAGCC
CCAGCGAGCTTCTTCAGATCCCGTTAGAACAAGAGACAGTGCAGCGTTAC
GTTTTCCTGAAACGGAAGAAGAAGCTCGAGGCGGACAAGTCGACTGTGTA
TTGCCCACGGCAGTGGTGTCAAGGAGCCGCACGATCCAAGAGACACCCCA
AGCCTGTTGATCCAATGACAGATGACCTCGATGACGAAGATGACGAAGAT
GAAGAGGGACCCGTGTTCGATCCCTTAGGGGAGGAGGCTCAGCTACCACC
AATGTCCGAGCGCGTCGCCATCTGCGAAGATTGCAACTATGCCTTCTGTT
GTGTTTGCAAGAAGGGCTGGCATGGCGAACTCGTACGGTGCTTCCCTCGC
CGCGAAGCAGAGCTCTCGGCCGAGGAGAAAGCAACGGAGGAGTATCTGCG
TATGTACACCTCGGCATGTCCGACATGCGATGCTCCATGCCAGAAGCAAA
TGGGTTGCAATCATATGATATGTTTCAAATGCGACACCCACTTCTGCTAT
CTCTGCTCTAGTTGGCTCTGCGAAGACAACCCTTACCGCCATTTCAACGA
CATCAACAGTGGATGTTTCAATCGACTGTGGGATCTGGAAGGTGGCGATG
GGATCAATCCCGATGGAGCCGCAGCCTTGCATCGTGTACCCGACGAACTG
CTGGACTTCGACGATGGCAGCGATGACGAGGACCTCGTTGCTTGGGAACT
CGGCAGACGACCTCCACCTCCTGCTCCGGTCCCTCCAAGAGTCAACAACG
GCGCAGCTGGAGGTAATCGCCATCGTGGGAACAACGCCAATGATCTCGAC
GCCGCAGGTCGAGCAGCCGCAGCTGAAAGACAAGCTCAAGCACGAGCAAT
GGCCGAGGTCCGCCGTCGTCCAGATGGCGAGCCTCCCCAAGTCAGACGCC
CGGGACTCCAGAGGTTTCTGGACCTGGTCCTGAATGACCGGGAAGACGAA
TGGGACAGTGACGAGCTAGATGATGATTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016135 |
| DBxref | InterPro:IPR001841 |
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR002867 |
| DBxref | InterPro:IPR006575 |
| DBxref | PFAM:PF05773 |
| DBxref | PFAM:PF01485 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:396609..398441 - |
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