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CBS51388_009287-T1, CBS51388_009287-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009287-T1
Unique NameCBS51388_009287-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:405293..406430+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009287-T1 ID=CBS51388_009287-T1|Name=CBS51388_009287-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1138bp|location=Sequence derived from alignment at An15:405293..406430+ (Aspergillus niger CBS 513.88)
ATGTCGTCCGACGAGATTGTTTGGCAGGTTATCAACCAGCAATTCTGCGC
CTATAAGCTCAAGTAAGTTTCTATCTCGATCTCTATCCGCGCATAAAAAA
AATTTCCGCCTACCACATACATACAGCGCAACAAGAACCGACAAAGAAGA
GAGAGAATATAATCCACAAGTATATAAATAAAAAGCTAACCATAATTTGT
TTTTGAAAAGAACCACTAAGAACCAAAACTTCTGCCGAAATGAATACAAC
GTTAGCGGACTCTGCAACCGGCAATCGTGCCCGCTCGCCAACTCGCGGTA
TGCCACGATCCGGTCGGACCCCGAAACAGGCGCGATGTACCTGTACATGA
AGACGGTGGAACGGGCGCACATGCCCAGCAAATGGTGGGAGCGGATACGA
CTGTCGTCGAACTACGCGAAGGCGCTGGAGCAGTTGGACGAGCGGCTGAT
CTACTGGCCGAAGTTCCTGGTGCACAAGTGCAAGCAGCGTCTGACGCGGC
TGACGCAGGTTGCGATTCGGATGAAGAAGTTGGCTAAGGAAGATGAGAGG
CTGGGTGAGAAGGTGGTGACGAAGTTGGCGCCGAAGATTCGGCGGAGAGA
GGAGGCCAGGGAACGCAAGGCAGAGAGTGCGGCGAAGATTGAGAGGGCAA
TTGAGAGGGAGCTGATTGAGCGGTTGAGGAGTGGTGCTTACGGAGATCGG
CCGTTGAATGTTGAGGAGGGCATTTGGAAGAAGGTGTTGCGTGGGTTGGA
GAGGAGCGGAGAGGGTGAGAGGGATGAGGATCTGGATGATGGGGAGGAGA
TTGAGTTTGAGGATGAGGAGGAGGAAGAGGAGGGTGTTGGTCAGGTTGAG
TATGTTAGTGATATTGATGAGGATGAAGAGGATTTGGAGGATATCGAGGA
TTGGATTGGTGAGGGGTCTGGCGACTCGAGTGACGATTATGATGATGAGA
GTGATGAGGATGAGGACAGTGATGAGGATGAGGATGACAGCAACCACTCT
GATGAGGAGGCGAAGAAGCCTGCGCCTGGCTTCAAGCGGAAGCGTCCTGC
TCCCCAGATTAAGCCGAGGAAGAAGGGCCCCCGTGTTGAGATCGAGTATG
AGACTGAGGGTGCTGGCAAGGAGAGCATCCTGGCTTGA
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Coding sequence (CDS) from alignment at An15:405293..406430+

>CBS51388_009287-T1 ID=CBS51388_009287-T1|Name=CBS51388_009287-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1980bp|location=Sequence derived from alignment at An15:405293..406430+ (Aspergillus niger CBS 513.88)
ATGTCGTCCGACGAGATTGTTTGGCAGGTTATCAACCAGCAATTCTGCGC
CTATAAGCTCAAAACCACTAAGAACCAAAACTTCTGCCGAAATGAATACA
ACGTTAGCGGACTCTGCAACCGGCAATCGTGCCCGCTCGCCAACTCGCGG
TATGCCACGATCCGGTCGGACCCCGAAACAGGCGCGATGTACCTGTACAT
GAAGACGGTGGAACGGGCGCACATGCCCAGCAAATGGTGGGAGCGGATAC
GACTGTCGTCGAACTACGCGAAGGCGCTGGAGCAGTTGGACGAGCGGCTG
ATCTACTGGCCGAAGTTCCTGGTGCACAAGTGCAAGCAGCGTCTGACGCG
GCTGACGCAGGTTGCGATTCGGATGAAGAAGTTGGCTAAGGAAGATGAGA
GGCTGGGTGAGAAGGTGGTGACGAAGTTGGCGCCGAAGATTCGGCGGAGA
GAGGAGGCCAGGGAACGCAAGGCAGAGAGTGCGGCGAAGATTGAGAGGGC
AATTGAGAGGGAGCTGATTGAGCGGTTGAGGAGTGGTGCTTACGGAGATC
GGCCGTTGAATGTTGAGGAGGGCATTTGGAAGAAGGTGTTGCGTGGGTTG
GAGAGGAGCGGAGAGGGTGAGAGGGATGAGGATCTGGATGATGGGGAGGA
GATTGAGTTTGAGGATGAGGAGGAGGAAGAGGAGGGTGTTGGTCAGGTTG
AGTATGTTAGTGATATTGATGAGGATGAAGAGGATTTGGAGGATATCGAG
GATTGGATTGGTGAGGGGTCTGGCGACTCGAGTGACGATTATGATGATGA
GAGTGATGAGGATGAGGACAGTGATGAGGATGAGGATGACAGCAACCACT
CTGATGAGGAGGCGAAGAAGCCTGCGCCTGGCTTCAAGCGGAAGCGTCCT
GCTCCCCAGATTAAGCCGAGGAAGAAGGGCCCCCGTGTTGAGATCGAGTA
TGAGACTGAGGGTGCTGGCAAGGAGAGCATCCTGGCTTGAATGTCGTCCG
ACGAGATTGTTTGGCAGGTTATCAACCAGCAATTCTGCGCCTATAAGCTC
AAAACCACTAAGAACCAAAACTTCTGCCGAAATGAATACAACGTTAGCGG
ACTCTGCAACCGGCAATCGTGCCCGCTCGCCAACTCGCGGTATGCCACGA
TCCGGTCGGACCCCGAAACAGGCGCGATGTACCTGTACATGAAGACGGTG
GAACGGGCGCACATGCCCAGCAAATGGTGGGAGCGGATACGACTGTCGTC
GAACTACGCGAAGGCGCTGGAGCAGTTGGACGAGCGGCTGATCTACTGGC
CGAAGTTCCTGGTGCACAAGTGCAAGCAGCGTCTGACGCGGCTGACGCAG
GTTGCGATTCGGATGAAGAAGTTGGCTAAGGAAGATGAGAGGCTGGGTGA
GAAGGTGGTGACGAAGTTGGCGCCGAAGATTCGGCGGAGAGAGGAGGCCA
GGGAACGCAAGGCAGAGAGTGCGGCGAAGATTGAGAGGGCAATTGAGAGG
GAGCTGATTGAGCGGTTGAGGAGTGGTGCTTACGGAGATCGGCCGTTGAA
TGTTGAGGAGGGCATTTGGAAGAAGGTGTTGCGTGGGTTGGAGAGGAGCG
GAGAGGGTGAGAGGGATGAGGATCTGGATGATGGGGAGGAGATTGAGTTT
GAGGATGAGGAGGAGGAAGAGGAGGGTGTTGGTCAGGTTGAGTATGTTAG
TGATATTGATGAGGATGAAGAGGATTTGGAGGATATCGAGGATTGGATTG
GTGAGGGGTCTGGCGACTCGAGTGACGATTATGATGATGAGAGTGATGAG
GATGAGGACAGTGATGAGGATGAGGATGACAGCAACCACTCTGATGAGGA
GGCGAAGAAGCCTGCGCCTGGCTTCAAGCGGAAGCGTCCTGCTCCCCAGA
TTAAGCCGAGGAAGAAGGGCCCCCGTGTTGAGATCGAGTATGAGACTGAG
GGTGCTGGCAAGGAGAGCATCCTGGCTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009287CBS51388_009287Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009287-T1.exon1CBS51388_009287-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009287-T1.exon2CBS51388_009287-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009287-T1.cdsCBS51388_009287-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009287-T1CBS51388_009287-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264L3W
DBxrefInterPro:IPR006958
DBxrefInterPro:IPR029004
DBxrefPFAM:PF01778
DBxrefPFAM:PF04874
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:405293..406430 +
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