You are here

Home

CBS51388_009289-T1, CBS51388_009289-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009289-T1
Unique NameCBS51388_009289-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:409696..411432+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009289-T1 ID=CBS51388_009289-T1|Name=CBS51388_009289-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1737bp|location=Sequence derived from alignment at An15:409696..411432+ (Aspergillus niger CBS 513.88)
ATGGGTGTCGTACACGACCTGGACACCTCCCATGATGACCACAAGGAGGG
AACCGCCTTGGAGATGGACGATGTCCTCAAGGACCCCAAGGCCATCGAGG
AATTCAACGAAGCTGCCATGGATGCAGAGTTGTTGCAACTCGAAGAGCAG
CTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTTCTCCAATCCATCTGT
GTATACCTACGTCCTAGTGGCCTTTGCCTCCATGGGTGGTCTGCTCTCCG
GTCTGGATCAGTCCCTCATCAGTGGTGCCAACATCTACCTGCCCGATGCA
TTGAACCTTACCGACAACCAAAGTAGTCTTGTGGATGCTGGTATGCCTCT
GGGTGCCGTGGCCGGTGCCCTGATCCTCTCCCCCGCCAACGAGTACCTCG
GTCGTCGCATGGCCATCATCGTCTCCTGCATCCTGTATACTATCGGTGCC
GCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGATCTTTGCTGGACGTTT
CGTGCTTGGTATGGGTGTGGGTCTGGAAGGTGGTACAGTCCCTGTGTATG
TCGCCGAGTCTGGTATGTACTTTTACCCCTTACTTCCTTTTACATCATCA
TCAACGTCCAATGTATCGACTAACGTCACTTCAGTGCCCCGCAAGATGCG
TGGTAACCTCGTCTCACTATACCAGTTGAACATCGCTCTCGGTGAAGTCC
TGGGCTATGCCGTGGCCGCCATCTTCCTCGATGTCAAGGGTAACTGGCGT
TACATCCTGGGATCTTCCCTGGTGTTCTCGACCATTCTGCTAGTGGGTAT
GCTTTTCCTGCCGGAGAGTCCGCGTTACCTCATGCACAAGGGCCGGGCCG
TGGAAGCCTACGGCGTATGGAAGCGAATCCGCGGCTTCAACGACTATGAC
GCCAAGGACGAGTTCCTGGGCATGCGCCAGGCGGTGGATGCCGAGCGCGA
AGAACAAGCCGCTACCAAGAAGTACGCCTGGATGGACTTCATCACAGTGC
CGCGCGCCCGTCGCGCCATGGTCTACGCCAACATCATGGTCTTCCTGGGC
CAATTCACCGGTGTCAACGCCATCATGTACTACATGAGCACACTGATGGA
TGCCATCGGCTTCGACGAGCGTGACAGCGTCTTCATGTCTTTGGTTGGTG
GTGGCTCCCTCCTGATCGGCACCATCCCGGCGGTGCTGTACATGGAACGG
TTCGGCCGCCGCTACTGGGCCAATGCGATGCTCCCCGGGTTTTTCATCGG
CTTAGTGCTGGTGGGCATCGGCTACCAGATCAACTACCAGACCCACCCCA
AAGCCGCCCAGGGCGTCTACCTCACCGGCATCATCCTCTACCAGGCCTTC
TTCGGCTCCTACGCGTGTCTCACCTGGGTCGTGCCCGCCGAAGTCTTCCC
CACTTATTTGCGCAGTTACGGCATGACCACCGCCGACGCCAACCTCTTCC
TCTGCTCCTTCATCGTCACCTACAACTTCACCCGCATGATGAAGGCCATG
ACCCGGATCGGTCTGACTCTGGGTTTCTATGGTGGAATTGCCTTCATTGG
CTGGTTCTACCAGATCATTTTCATGCCTGAGACCAAGAACAAGTCCCTCG
AGGAAATCGATGAGCTTTTCTCCCGTCCCACTTCTGCTATTGTCAAGGAG
AATCTGAAGAGTACGGGCGAGGTCATTGATGATTTGTTCCACTTGCGCTT
CAAGAAGGTGTTTTCGCCGCCGCCGAAGGAGGACTGA
back to top

Coding sequence (CDS) from alignment at An15:409696..411432+

>CBS51388_009289-T1 ID=CBS51388_009289-T1|Name=CBS51388_009289-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3330bp|location=Sequence derived from alignment at An15:409696..411432+ (Aspergillus niger CBS 513.88)
ATGGGTGTCGTACACGACCTGGACACCTCCCATGATGACCACAAGGAGGG
AACCGCCTTGGAGATGGACGATGTCCTCAAGGACCCCAAGGCCATCGAGG
AATTCAACGAAGCTGCCATGGATGCAGAGTTGTTGCAACTCGAAGAGCAG
CTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTTCTCCAATCCATCTGT
GTATACCTACGTCCTAGTGGCCTTTGCCTCCATGGGTGGTCTGCTCTCCG
GTCTGGATCAGTCCCTCATCAGTGGTGCCAACATCTACCTGCCCGATGCA
TTGAACCTTACCGACAACCAAAGTAGTCTTGTGGATGCTGGTATGCCTCT
GGGTGCCGTGGCCGGTGCCCTGATCCTCTCCCCCGCCAACGAGTACCTCG
GTCGTCGCATGGCCATCATCGTCTCCTGCATCCTGTATACTATCGGTGCC
GCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGATCTTTGCTGGACGTTT
CGTGCTTGGTATGGGTGTGGGTCTGGAAGGTGGTACAGTCCCTGTGTATG
TCGCCGAGTCTGTGCCCCGCAAGATGCGTGGTAACCTCGTCTCACTATAC
CAGTTGAACATCGCTCTCGGTGAAGTCCTGGGCTATGCCGTGGCCGCCAT
CTTCCTCGATGTCAAGGGTAACTGGCGTTACATCCTGGGATCTTCCCTGG
TGTTCTCGACCATTCTGCTAGTGGGTATGCTTTTCCTGCCGGAGAGTCCG
CGTTACCTCATGCACAAGGGCCGGGCCGTGGAAGCCTACGGCGTATGGAA
GCGAATCCGCGGCTTCAACGACTATGACGCCAAGGACGAGTTCCTGGGCA
TGCGCCAGGCGGTGGATGCCGAGCGCGAAGAACAAGCCGCTACCAAGAAG
TACGCCTGGATGGACTTCATCACAGTGCCGCGCGCCCGTCGCGCCATGGT
CTACGCCAACATCATGGTCTTCCTGGGCCAATTCACCGGTGTCAACGCCA
TCATGTACTACATGAGCACACTGATGGATGCCATCGGCTTCGACGAGCGT
GACAGCGTCTTCATGTCTTTGGTTGGTGGTGGCTCCCTCCTGATCGGCAC
CATCCCGGCGGTGCTGTACATGGAACGGTTCGGCCGCCGCTACTGGGCCA
ATGCGATGCTCCCCGGGTTTTTCATCGGCTTAGTGCTGGTGGGCATCGGC
TACCAGATCAACTACCAGACCCACCCCAAAGCCGCCCAGGGCGTCTACCT
CACCGGCATCATCCTCTACCAGGCCTTCTTCGGCTCCTACGCGTGTCTCA
CCTGGGTCGTGCCCGCCGAAGTCTTCCCCACTTATTTGCGCAGTTACGGC
ATGACCACCGCCGACGCCAACCTCTTCCTCTGCTCCTTCATCGTCACCTA
CAACTTCACCCGCATGATGAAGGCCATGACCCGGATCGGTCTGACTCTGG
GTTTCTATGGTGGAATTGCCTTCATTGGCTGGTTCTACCAGATCATTTTC
ATGCCTGAGACCAAGAACAAGTCCCTCGAGGAAATCGATGAGCTTTTCTC
CCGTCCCACTTCTGCTATTGTCAAGGAGAATCTGAAGAGTACGGGCGAGG
TCATTGATGATTTGTTCCACTTGCGCTTCAAGAAGGTGTTTTCGCCGCCG
CCGAAGGAGGACTGAATGGGTGTCGTACACGACCTGGACACCTCCCATGA
TGACCACAAGGAGGGAACCGCCTTGGAGATGGACGATGTCCTCAAGGACC
CCAAGGCCATCGAGGAATTCAACGAAGCTGCCATGGATGCAGAGTTGTTG
CAACTCGAAGAGCAGCTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTT
CTCCAATCCATCTGTGTATACCTACGTCCTAGTGGCCTTTGCCTCCATGG
GTGGTCTGCTCTCCGGTCTGGATCAGTCCCTCATCAGTGGTGCCAACATC
TACCTGCCCGATGCATTGAACCTTACCGACAACCAAAGTAGTCTTGTGGA
TGCTGGTATGCCTCTGGGTGCCGTGGCCGGTGCCCTGATCCTCTCCCCCG
CCAACGAGTACCTCGGTCGTCGCATGGCCATCATCGTCTCCTGCATCCTG
TATACTATCGGTGCCGCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGAT
CTTTGCTGGACGTTTCGTGCTTGGTATGGGTGTGGGTCTGGAAGGTGGTA
CAGTCCCTGTGTATGTCGCCGAGTCTGTGCCCCGCAAGATGCGTGGTAAC
CTCGTCTCACTATACCAGTTGAACATCGCTCTCGGTGAAGTCCTGGGCTA
TGCCGTGGCCGCCATCTTCCTCGATGTCAAGGGTAACTGGCGTTACATCC
TGGGATCTTCCCTGGTGTTCTCGACCATTCTGCTAGTGGGTATGCTTTTC
CTGCCGGAGAGTCCGCGTTACCTCATGCACAAGGGCCGGGCCGTGGAAGC
CTACGGCGTATGGAAGCGAATCCGCGGCTTCAACGACTATGACGCCAAGG
ACGAGTTCCTGGGCATGCGCCAGGCGGTGGATGCCGAGCGCGAAGAACAA
GCCGCTACCAAGAAGTACGCCTGGATGGACTTCATCACAGTGCCGCGCGC
CCGTCGCGCCATGGTCTACGCCAACATCATGGTCTTCCTGGGCCAATTCA
CCGGTGTCAACGCCATCATGTACTACATGAGCACACTGATGGATGCCATC
GGCTTCGACGAGCGTGACAGCGTCTTCATGTCTTTGGTTGGTGGTGGCTC
CCTCCTGATCGGCACCATCCCGGCGGTGCTGTACATGGAACGGTTCGGCC
GCCGCTACTGGGCCAATGCGATGCTCCCCGGGTTTTTCATCGGCTTAGTG
CTGGTGGGCATCGGCTACCAGATCAACTACCAGACCCACCCCAAAGCCGC
CCAGGGCGTCTACCTCACCGGCATCATCCTCTACCAGGCCTTCTTCGGCT
CCTACGCGTGTCTCACCTGGGTCGTGCCCGCCGAAGTCTTCCCCACTTAT
TTGCGCAGTTACGGCATGACCACCGCCGACGCCAACCTCTTCCTCTGCTC
CTTCATCGTCACCTACAACTTCACCCGCATGATGAAGGCCATGACCCGGA
TCGGTCTGACTCTGGGTTTCTATGGTGGAATTGCCTTCATTGGCTGGTTC
TACCAGATCATTTTCATGCCTGAGACCAAGAACAAGTCCCTCGAGGAAAT
CGATGAGCTTTTCTCCCGTCCCACTTCTGCTATTGTCAAGGAGAATCTGA
AGAGTACGGGCGAGGTCATTGATGATTTGTTCCACTTGCGCTTCAAGAAG
GTGTTTTCGCCGCCGCCGAAGGAGGACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009289CBS51388_009289Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009289-T1.exon1CBS51388_009289-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009289-T1.exon2CBS51388_009289-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009289-T1.cdsCBS51388_009289-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009289-T1CBS51388_009289-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:409696..411432 +
Powered by Drupal