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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:423536..425099- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009292-T1 ID=CBS51388_009292-T1|Name=CBS51388_009292-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1564bp|location=Sequence derived from alignment at An15:423536..425099- (Aspergillus niger CBS 513.88)
ATGCGTTTTCGAACTCAAATAGCCAACGCGTCTATCTTCTCCAGTAAGTG
GCCTTCCCATCCCCTATCCCTTTCACCCAAGCTCCCCAGCCAAATCAGCC
GTGTTTCAACAACCGCCGCCATCACCATACTTACAATAGACGCACCCCCA
TACTAACTCCACATCCCCCCCAGAACTAACCGCCTCCCTCTCCTCCCTGG
GAAAGGTATGTTGGATGCGTCTTGAAAAAGACTTCATCCGCTTCACCATC
ATCCCCGACCAAGGCACGCAAGTATGGGCTCAACTCCCCATCGTACGTCT
CCCCCATCCCCCAAGCCTACTCCAAACTAACACTCCACCCCCAGGATACC
ATCTTCGAAGAAGAGTCTTACATCTGTGAATCCAACACCGGAGCAATCAA
CCTCGAAGTCCCCATCGGCGCACTCCACCGCGCCCTGCGCTCCGCCGTAT
CCGCCAAACTAGCCAACCTCAGACTCACCAAAAAGGGCAACGTACCTCTC
CTAGCACTAACTATTCGCGCTACCTCCTGGACCACGACATCCAATGCCCT
GGACATCCCAGAAGCAACGACAACAACAGACCACTCCTCATCCACCATCG
ACAATGCCACTGCCACTGCCAGACCATCGGGCACTGGGCCCCGGGAACGC
GAAACAGTAATCACCCAGGAAATCCCCATTAAAGTACTCCACGAGTCCGC
AGTCGAAGGACTCCACCAGCCACGCTGTCGGGATCCAGATGTAAATATCC
TTCTTCCAAGCTTAATCCAGTTGAAGAGCATCTCGGAGCGTTTTACGAAA
TTGGCTACGACTTCTTCCAATAAAACATCAACAGCAGCAGTAGGGGGATC
TACTTCAACAACACCATCACTATCATCACCCAAGCTTGAACTCTCCGCTA
ACATGCACGGCTCCCTCAAAGTAGCCGTCGGGACGGACGCATTCCGGATA
TCGAGCGTCTGGACGGATCTACTGAATCCGAGTCTGGATCCGGGGCAGCT
GGGCGATGGGAGAGAGTTGAATCAGTTGCCGAGTGAGAGGATGAGGGAGG
TGCCGGCGGATGATGAGGCTGGGTGGGCGAAGGTCAGGATTGATGGGAAG
GATTGGAGTCGGATTTTGAGTGTCGGCAGGTTGAATCCGAGGGTTGTTGC
TTGTAAGTTCCTTTCTCTCTTTCTTTTCCAATTTCTTTCTCTAGGATTTT
AGGGCTAATGATGGCTTGGGGATAGCGTTTATTCATGAGACGGCTTTGGT
GCTGTATGTCTTCTTACCTGGGAGTTGGAATGAGCAGGATTCATGTCTGA
CGGTGAGTCACACTTTTCTTATAGTTTGCTGTGTGGGAGAAGGGCGAGGT
GGGGCTGACTGGTTGTTGTGCAGTATTATATCACTTCTTATGCGGTTTAG
TTGAGGGCACAGCGCACATAGCATATCATAGAATGATGATGGGTTTACGA
TGATGAGCTGGTATAGGAACACTACTTGTTCTGGGATGCATATATGAAAT
ACGGATATAAAAAGTTACCTAGGGGTTGAGGTGCTTATCTACTATGACTA
CCACAAATATATAA back to topCoding sequence (CDS) from alignment at An15:423536..425099- >CBS51388_009292-T1 ID=CBS51388_009292-T1|Name=CBS51388_009292-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5445bp|location=Sequence derived from alignment at An15:423536..425099- (Aspergillus niger CBS 513.88)
GGGTTGAGGTGCTTATCTACTATGACTACCACAAATATATAACGTTTATT
CATGAGACGGCTTTGGTGCTGTATGTCTTCTTACCTGGGAGTTGGAATGA
GCAGGATTCATGTCTGACGGATACCATCTTCGAAGAAGAGTCTTACATCT
GTGAATCCAACACCGGAGCAATCAACCTCGAAGTCCCCATCGGCGCACTC
CACCGCGCCCTGCGCTCCGCCGTATCCGCCAAACTAGCCAACCTCAGACT
CACCAAAAAGGGCAACGTACCTCTCCTAGCACTAACTATTCGCGCTACCT
CCTGGACCACGACATCCAATGCCCTGGACATCCCAGAAGCAACGACAACA
ACAGACCACTCCTCATCCACCATCGACAATGCCACTGCCACTGCCAGACC
ATCGGGCACTGGGCCCCGGGAACGCGAAACAGTAATCACCCAGGAAATCC
CCATTAAAGTACTCCACGAGTCCGCAGTCGAAGGACTCCACCAGCCACGC
TGTCGGGATCCAGATGTAAATATCCTTCTTCCAAGCTTAATCCAGTTGAA
GAGCATCTCGGAGCGTTTTACGAAATTGGCTACGACTTCTTCCAATAAAA
CATCAACAGCAGCAGTAGGGGGATCTACTTCAACAACACCATCACTATCA
TCACCCAAGCTTGAACTCTCCGCTAACATGCACGGCTCCCTCAAAGTAGC
CGTCGGGACGGACGCATTCCGGATATCGAGCGTCTGGACGGATCTACTGA
ATCCGAGTCTGGATCCGGGGCAGCTGGGCGATGGGAGAGAGTTGAATCAG
TTGCCGAGTGAGAGGATGAGGGAGGTGCCGGCGGATGATGAGGCTGGGTG
GGCGAAGGTCAGGATTGATGGGAAGGATTGGAGTCGGATTTTGAGTGTCG
GCAGGTTGAATCCGAGGGTTGTTGCTTAACTAACCGCCTCCCTCTCCTCC
CTGGGAAAGGTATGTTGGATGCGTCTTGAAAAAGACTTCATCCGCTTCAC
CATCATCCCCGACCAAGGCACGCAAGTATGGGCTCAACTCCCCATCATGC
GTTTTCGAACTCAAATAGCCAACGCGTCTATCTTCTCCAGGGTTGAGGTG
CTTATCTACTATGACTACCACAAATATATAACGTTTATTCATGAGACGGC
TTTGGTGCTGTATGTCTTCTTACCTGGGAGTTGGAATGAGCAGGATTCAT
GTCTGACGGATACCATCTTCGAAGAAGAGTCTTACATCTGTGAATCCAAC
ACCGGAGCAATCAACCTCGAAGTCCCCATCGGCGCACTCCACCGCGCCCT
GCGCTCCGCCGTATCCGCCAAACTAGCCAACCTCAGACTCACCAAAAAGG
GCAACGTACCTCTCCTAGCACTAACTATTCGCGCTACCTCCTGGACCACG
ACATCCAATGCCCTGGACATCCCAGAAGCAACGACAACAACAGACCACTC
CTCATCCACCATCGACAATGCCACTGCCACTGCCAGACCATCGGGCACTG
GGCCCCGGGAACGCGAAACAGTAATCACCCAGGAAATCCCCATTAAAGTA
CTCCACGAGTCCGCAGTCGAAGGACTCCACCAGCCACGCTGTCGGGATCC
AGATGTAAATATCCTTCTTCCAAGCTTAATCCAGTTGAAGAGCATCTCGG
AGCGTTTTACGAAATTGGCTACGACTTCTTCCAATAAAACATCAACAGCA
GCAGTAGGGGGATCTACTTCAACAACACCATCACTATCATCACCCAAGCT
TGAACTCTCCGCTAACATGCACGGCTCCCTCAAAGTAGCCGTCGGGACGG
ACGCATTCCGGATATCGAGCGTCTGGACGGATCTACTGAATCCGAGTCTG
GATCCGGGGCAGCTGGGCGATGGGAGAGAGTTGAATCAGTTGCCGAGTGA
GAGGATGAGGGAGGTGCCGGCGGATGATGAGGCTGGGTGGGCGAAGGTCA
GGATTGATGGGAAGGATTGGAGTCGGATTTTGAGTGTCGGCAGGTTGAAT
CCGAGGGTTGTTGCTTAACTAACCGCCTCCCTCTCCTCCCTGGGAAAGGT
ATGTTGGATGCGTCTTGAAAAAGACTTCATCCGCTTCACCATCATCCCCG
ACCAAGGCACGCAAGTATGGGCTCAACTCCCCATCATGCGTTTTCGAACT
CAAATAGCCAACGCGTCTATCTTCTCCAGGGTTGAGGTGCTTATCTACTA
TGACTACCACAAATATATAACGTTTATTCATGAGACGGCTTTGGTGCTGT
ATGTCTTCTTACCTGGGAGTTGGAATGAGCAGGATTCATGTCTGACGGAT
ACCATCTTCGAAGAAGAGTCTTACATCTGTGAATCCAACACCGGAGCAAT
CAACCTCGAAGTCCCCATCGGCGCACTCCACCGCGCCCTGCGCTCCGCCG
TATCCGCCAAACTAGCCAACCTCAGACTCACCAAAAAGGGCAACGTACCT
CTCCTAGCACTAACTATTCGCGCTACCTCCTGGACCACGACATCCAATGC
CCTGGACATCCCAGAAGCAACGACAACAACAGACCACTCCTCATCCACCA
TCGACAATGCCACTGCCACTGCCAGACCATCGGGCACTGGGCCCCGGGAA
CGCGAAACAGTAATCACCCAGGAAATCCCCATTAAAGTACTCCACGAGTC
CGCAGTCGAAGGACTCCACCAGCCACGCTGTCGGGATCCAGATGTAAATA
TCCTTCTTCCAAGCTTAATCCAGTTGAAGAGCATCTCGGAGCGTTTTACG
AAATTGGCTACGACTTCTTCCAATAAAACATCAACAGCAGCAGTAGGGGG
ATCTACTTCAACAACACCATCACTATCATCACCCAAGCTTGAACTCTCCG
CTAACATGCACGGCTCCCTCAAAGTAGCCGTCGGGACGGACGCATTCCGG
ATATCGAGCGTCTGGACGGATCTACTGAATCCGAGTCTGGATCCGGGGCA
GCTGGGCGATGGGAGAGAGTTGAATCAGTTGCCGAGTGAGAGGATGAGGG
AGGTGCCGGCGGATGATGAGGCTGGGTGGGCGAAGGTCAGGATTGATGGG
AAGGATTGGAGTCGGATTTTGAGTGTCGGCAGGTTGAATCCGAGGGTTGT
TGCTTAACTAACCGCCTCCCTCTCCTCCCTGGGAAAGGTATGTTGGATGC
GTCTTGAAAAAGACTTCATCCGCTTCACCATCATCCCCGACCAAGGCACG
CAAGTATGGGCTCAACTCCCCATCATGCGTTTTCGAACTCAAATAGCCAA
CGCGTCTATCTTCTCCAGGGTTGAGGTGCTTATCTACTATGACTACCACA
AATATATAACGTTTATTCATGAGACGGCTTTGGTGCTGTATGTCTTCTTA
CCTGGGAGTTGGAATGAGCAGGATTCATGTCTGACGGATACCATCTTCGA
AGAAGAGTCTTACATCTGTGAATCCAACACCGGAGCAATCAACCTCGAAG
TCCCCATCGGCGCACTCCACCGCGCCCTGCGCTCCGCCGTATCCGCCAAA
CTAGCCAACCTCAGACTCACCAAAAAGGGCAACGTACCTCTCCTAGCACT
AACTATTCGCGCTACCTCCTGGACCACGACATCCAATGCCCTGGACATCC
CAGAAGCAACGACAACAACAGACCACTCCTCATCCACCATCGACAATGCC
ACTGCCACTGCCAGACCATCGGGCACTGGGCCCCGGGAACGCGAAACAGT
AATCACCCAGGAAATCCCCATTAAAGTACTCCACGAGTCCGCAGTCGAAG
GACTCCACCAGCCACGCTGTCGGGATCCAGATGTAAATATCCTTCTTCCA
AGCTTAATCCAGTTGAAGAGCATCTCGGAGCGTTTTACGAAATTGGCTAC
GACTTCTTCCAATAAAACATCAACAGCAGCAGTAGGGGGATCTACTTCAA
CAACACCATCACTATCATCACCCAAGCTTGAACTCTCCGCTAACATGCAC
GGCTCCCTCAAAGTAGCCGTCGGGACGGACGCATTCCGGATATCGAGCGT
CTGGACGGATCTACTGAATCCGAGTCTGGATCCGGGGCAGCTGGGCGATG
GGAGAGAGTTGAATCAGTTGCCGAGTGAGAGGATGAGGGAGGTGCCGGCG
GATGATGAGGCTGGGTGGGCGAAGGTCAGGATTGATGGGAAGGATTGGAG
TCGGATTTTGAGTGTCGGCAGGTTGAATCCGAGGGTTGTTGCTTAACTAA
CCGCCTCCCTCTCCTCCCTGGGAAAGGTATGTTGGATGCGTCTTGAAAAA
GACTTCATCCGCTTCACCATCATCCCCGACCAAGGCACGCAAGTATGGGC
TCAACTCCCCATCATGCGTTTTCGAACTCAAATAGCCAACGCGTCTATCT
TCTCCAGGGTTGAGGTGCTTATCTACTATGACTACCACAAATATATAACG
TTTATTCATGAGACGGCTTTGGTGCTGTATGTCTTCTTACCTGGGAGTTG
GAATGAGCAGGATTCATGTCTGACGGATACCATCTTCGAAGAAGAGTCTT
ACATCTGTGAATCCAACACCGGAGCAATCAACCTCGAAGTCCCCATCGGC
GCACTCCACCGCGCCCTGCGCTCCGCCGTATCCGCCAAACTAGCCAACCT
CAGACTCACCAAAAAGGGCAACGTACCTCTCCTAGCACTAACTATTCGCG
CTACCTCCTGGACCACGACATCCAATGCCCTGGACATCCCAGAAGCAACG
ACAACAACAGACCACTCCTCATCCACCATCGACAATGCCACTGCCACTGC
CAGACCATCGGGCACTGGGCCCCGGGAACGCGAAACAGTAATCACCCAGG
AAATCCCCATTAAAGTACTCCACGAGTCCGCAGTCGAAGGACTCCACCAG
CCACGCTGTCGGGATCCAGATGTAAATATCCTTCTTCCAAGCTTAATCCA
GTTGAAGAGCATCTCGGAGCGTTTTACGAAATTGGCTACGACTTCTTCCA
ATAAAACATCAACAGCAGCAGTAGGGGGATCTACTTCAACAACACCATCA
CTATCATCACCCAAGCTTGAACTCTCCGCTAACATGCACGGCTCCCTCAA
AGTAGCCGTCGGGACGGACGCATTCCGGATATCGAGCGTCTGGACGGATC
TACTGAATCCGAGTCTGGATCCGGGGCAGCTGGGCGATGGGAGAGAGTTG
AATCAGTTGCCGAGTGAGAGGATGAGGGAGGTGCCGGCGGATGATGAGGC
TGGGTGGGCGAAGGTCAGGATTGATGGGAAGGATTGGAGTCGGATTTTGA
GTGTCGGCAGGTTGAATCCGAGGGTTGTTGCTTAACTAACCGCCTCCCTC
TCCTCCCTGGGAAAGGTATGTTGGATGCGTCTTGAAAAAGACTTCATCCG
CTTCACCATCATCCCCGACCAAGGCACGCAAGTATGGGCTCAACTCCCCA
TCATGCGTTTTCGAACTCAAATAGCCAACGCGTCTATCTTCTCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030896 | checkpoint clamp complex |
| GO:0005730 | nucleolus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000077 | DNA damage checkpoint |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007150 |
| DBxref | InterPro:IPR016580 |
| DBxref | PFAM:PF04005 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:423536..425099 - |
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