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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:473144..474562- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009309-T1 ID=CBS51388_009309-T1|Name=CBS51388_009309-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1419bp|location=Sequence derived from alignment at An15:473144..474562- (Aspergillus niger CBS 513.88)
ATGACACGTTCCGCCACTGCGCGGGAGACAGCGCTACTTGCTGCTCAGAT
GCAGCAGAACGAGGCCCAGCCATCCAAGGTATCAGACTCGGATGCTGCAG
CCTTCAAAGACTCGGCCAGAAGAGCAACCGCCGCTACATCTGCGAGTCAC
ACTCGACCCACGAAGCGCAACGGGCCAGTTGGTGAACCTGTCTCCAAGAG
GACAAAGACGAACCGCAGAAATGCACAAAATAATGATGCCCAAGAACTTC
CTCACAATTTAGGTTCGGCTACTCTGCTACCCGAGCTGCAAGATAAGAGC
GCTCCAATTAAGCTAGACACCCGCGACACCCCTATAAAGAAAGAAGAGAT
AGATGCAATTTCCAACACCCTGCAGAACACTGTCGACAAGGCCACAAAAG
CGGCCTCGGGGTCCAGTGAAAAGGAGAAGAGATCCAAAAAGACTAATACA
TATGGCCTCACACCTGGAATTACCCCATTCCCAGACTGGGCTCGTCCCAC
CCCTGAAGAATGTGAAGAAGTCAATCGGTTACTCTCGACCGTACACGGAG
AGATTGTTGCACCTACCACTATTCCGGAGCCATCGCTCACTGTTACCGGC
TGTGGCGAGGTTCCTTCGGTCCTTGATGCTCTCATCCGCACGTTGCTCAG
CGGAGCAACAACAGGAAACAACTCTGCCATGGCATTCAACGGTCTTGTGC
AGAGATTTGGTATCCTGAAAGAGGGTATCGGTAAAGGAAGCGTGGATTGG
GATGCTGTCCGTCAGGCGCCACTCAAGGATGTCTTTGAAGCCATCAAACG
TGGCGGCTTAGCGGATATCAAGAGCAAGAAGATCAAGGCTATACTAGACA
TGGTCTACGAAGAGAATCAGCAGCGCAGAGACATGCTGCTGAAGGGTTCC
CGGGACGCACCACAGGATCTGATCAAGAAGTCCGAAGGTGGCAAGCAATA
TGAAATTGCATGCGCGGACCAGCACTTCCTATCCCTGAACCATCTTCACA
GCCTTGCCACAGAGGACGCCATGGTGGAGTTGGTTAAATACCCGGGTATA
GGCCCGAAGACGGCTGCTTGTGTGTTGCTCTTTTGCTTGCAGCGCCCTTG
CTTTGCAGTTGATACTCACATCTTCCGTATATGCAAGTGGTTGGGCTGGG
TGCCTTCGGACAAAGCAACGGAGATTACGGCGTTCAGCCATCTTGAAGTG
CGCATTCCTGATCATTTGAAGTATTCCCTTCATCAGCTCCTCATCCGTCA
TGGTAAGTCTTGTCCACGGTGTCGGGCAATTACTGGGCAGTCATCTGCCG
GATGGGAGGAGGGCTGTGTGATTGATCATCTGGTAAAAAGGACGGGAAAG
AGGAAGGGAGGTGGCACAGAATCAGTGACGGAGGATGCCAAATCCAATGG
GCGGAAACGCCGTGCTTAA back to topCoding sequence (CDS) from alignment at An15:473144..474562- >CBS51388_009309-T1 ID=CBS51388_009309-T1|Name=CBS51388_009309-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1419bp|location=Sequence derived from alignment at An15:473144..474562- (Aspergillus niger CBS 513.88)
ATGACACGTTCCGCCACTGCGCGGGAGACAGCGCTACTTGCTGCTCAGAT
GCAGCAGAACGAGGCCCAGCCATCCAAGGTATCAGACTCGGATGCTGCAG
CCTTCAAAGACTCGGCCAGAAGAGCAACCGCCGCTACATCTGCGAGTCAC
ACTCGACCCACGAAGCGCAACGGGCCAGTTGGTGAACCTGTCTCCAAGAG
GACAAAGACGAACCGCAGAAATGCACAAAATAATGATGCCCAAGAACTTC
CTCACAATTTAGGTTCGGCTACTCTGCTACCCGAGCTGCAAGATAAGAGC
GCTCCAATTAAGCTAGACACCCGCGACACCCCTATAAAGAAAGAAGAGAT
AGATGCAATTTCCAACACCCTGCAGAACACTGTCGACAAGGCCACAAAAG
CGGCCTCGGGGTCCAGTGAAAAGGAGAAGAGATCCAAAAAGACTAATACA
TATGGCCTCACACCTGGAATTACCCCATTCCCAGACTGGGCTCGTCCCAC
CCCTGAAGAATGTGAAGAAGTCAATCGGTTACTCTCGACCGTACACGGAG
AGATTGTTGCACCTACCACTATTCCGGAGCCATCGCTCACTGTTACCGGC
TGTGGCGAGGTTCCTTCGGTCCTTGATGCTCTCATCCGCACGTTGCTCAG
CGGAGCAACAACAGGAAACAACTCTGCCATGGCATTCAACGGTCTTGTGC
AGAGATTTGGTATCCTGAAAGAGGGTATCGGTAAAGGAAGCGTGGATTGG
GATGCTGTCCGTCAGGCGCCACTCAAGGATGTCTTTGAAGCCATCAAACG
TGGCGGCTTAGCGGATATCAAGAGCAAGAAGATCAAGGCTATACTAGACA
TGGTCTACGAAGAGAATCAGCAGCGCAGAGACATGCTGCTGAAGGGTTCC
CGGGACGCACCACAGGATCTGATCAAGAAGTCCGAAGGTGGCAAGCAATA
TGAAATTGCATGCGCGGACCAGCACTTCCTATCCCTGAACCATCTTCACA
GCCTTGCCACAGAGGACGCCATGGTGGAGTTGGTTAAATACCCGGGTATA
GGCCCGAAGACGGCTGCTTGTGTGTTGCTCTTTTGCTTGCAGCGCCCTTG
CTTTGCAGTTGATACTCACATCTTCCGTATATGCAAGTGGTTGGGCTGGG
TGCCTTCGGACAAAGCAACGGAGATTACGGCGTTCAGCCATCTTGAAGTG
CGCATTCCTGATCATTTGAAGTATTCCCTTCATCAGCTCCTCATCCGTCA
TGGTAAGTCTTGTCCACGGTGTCGGGCAATTACTGGGCAGTCATCTGCCG
GATGGGAGGAGGGCTGTGTGATTGATCATCTGGTAAAAAGGACGGGAAAG
AGGAAGGGAGGTGGCACAGAATCAGTGACGGAGGATGCCAAATCCAATGG
GCGGAAACGCCGTGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0006284 | base-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011257 |
| DBxref | InterPro:IPR023170 |
| DBxref | InterPro:IPR003265 |
| DBxref | PFAM:PF00730 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:473144..474562 - |
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