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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:488669..490552+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009315-T1 ID=CBS51388_009315-T1|Name=CBS51388_009315-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1884bp|location=Sequence derived from alignment at An15:488669..490552+ (Aspergillus niger CBS 513.88)
ATGCATGGGCTCGGCAGGAGGACTCGGTCCAAGACTGGTAAGGATCCCCA
CCAGTTCTGTCTTACACAAATTGTCTAGGTTGCTTTTTTTGTCCCAGAAC
GGTCGGACTTACTGCACCATAGGTTGTCGCACGTGTAGAATTCGCAAGGT
CAAATGCGACGAAGAAAAACTATTCGTTCCCGGTCAGGAGGAGCCACAAT
GCCGGCGTTGCACAGCGGCCCGGATCGTATGTGAGTGGAAGGGCGGCCCC
ATCCCCCGGGGTCCAGCAAAAAGGCCCGGAAAAGACCCTCGCTCGGTGGA
AGCGCAGATGGTCCGTCAGTCTGTTCCGTCTCCTGCACGCTCTTTATCGC
CCACCGGGGCTGCTGGGAATAGCATTCAAGCGGCCAATTCCCTTGTTATA
TCGGACTTTGATCGCTCGTGCTTGAATTATCTTCAGGATTCCGCGCTGGT
CGTGATCCTCGGAAAGCATTGGCCATGGTCTACAGTCTCTTATGCATACC
ACAAAATCGCAGTTAAAGAACCCATGGTCATGAGCATGATGTTGGCGACT
ACATCTAGTGAGATCAACCGGTCGCGTCTGTACGACCGGGACAAGACGGA
GGGACCATGTACTATTGAGAGCCTGTCCGACATGGACAGTAGATTGCACT
ATGGTCGGGCTCTCTCTGGCCTCCGGGAAGCGCTGAAACCAGACGTCAAG
CCCCCGGAGCAGATCGAAGCCATCTTCATCACCTTGTGGATGATGATTGA
CTATGAGAACCGATTCGGCAGCGGGACTGCTGGAATCAATATTCACATTC
GCGGAATCGAGAGTCTACTCTTCAACCACGTCGTCCCATCACTCAAACAA
ATAGGGCCTCCAGATATCGCAATTGCAGAAGCAAGTTCAAAGACTGCACT
ATGTCATGTCACAGACGAGGCCCAGGGCACGAGCGCATGTGACAGCCCTG
GGCCGCAACAGACTGCCGAATTGTCCAAGAATAGGCTTCGACATACAGCG
GTCCCTCTTTTTCTGCTTTGGACTTTGTACTTTTTCACACCGGGCGCTTT
GCTCTCTGGCCCAGGCGCTGCAAGGCTCGATGCCGACCTCTTCCGGTTTT
TCATGAAAGAGGAAGCAGGAAGTGTGGGATTGAGTCTTTCCGAGCTATAC
AGGATTGGCAGACAGTCACCGTCTCGATTCTGGGGGGATTCCTACCCCAC
CACAGCCCAGCTGGATGATATGGAGAATATGCCCGGGCTATCGCTGTATC
ATCGAAGTCATGTACTGCAATTCAAGATTACGGAGTTATTTCGGCAAGGA
AGTCATTCGGTCACGACGGGTCTTGAGATCATTAGTGAACTCAACATGTT
ATCTGATGTAAGTTCCCGTCTTAGTCCTGCAGATGACCTGTCATTTATCT
TCATATGGATGGTGACGGCGACTAATCCGCTGATCAGGAATACGATACCT
TGTTGGGTTCCGCCAAGTCTGCGCCCTCGTGTGAAATCGTGGGTGACGGA
CGTCGCGTGATGGAAACGATCTTTTGGGCAGCCATTACTTACTACGGCAC
GATCGTGTACTTCCACCTGTGCTTCAAAGACACCCTGGCCAAAGGTATGC
AGGGTGCAGGGATGATGACTCTGCATGATGCCGTTTCCCAGGTTCTGGAA
CTCTCTTTGAAGCTACATCGCAGCAGACCGCACTTGATGGTGCGCATCAC
GTGGCCTCTCTTCATCGCGGGGATAGCCACATCTGACAGGATCTACCAAG
ACTGGGTGTCGTTTCGGCTGCGCGAGCTTGGTCGCTATGGGCTCAACTAC
AGCCGGGTCAGCGCCCGGTTTGACGAGATCATCCAAGGAGGCGATCCCTT
TGCGCACGGACGAAGGCCATTGTGCGCGCAGTAG back to topCoding sequence (CDS) from alignment at An15:488669..490552+ >CBS51388_009315-T1 ID=CBS51388_009315-T1|Name=CBS51388_009315-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5157bp|location=Sequence derived from alignment at An15:488669..490552+ (Aspergillus niger CBS 513.88)
ATGCATGGGCTCGGCAGGAGGACTCGGTCCAAGACTGGTTGTCGCACGTG
TAGAATTCGCAAGGTCAAATGCGACGAAGAAAAACTATTCGTTCCCGGTC
AGGAGGAGCCACAATGCCGGCGTTGCACAGCGGCCCGGATCGTATGTGAG
TGGAAGGGCGGCCCCATCCCCCGGGGTCCAGCAAAAAGGCCCGGAAAAGA
CCCTCGCTCGGTGGAAGCGCAGATGGTCCGTCAGTCTGTTCCGTCTCCTG
CACGCTCTTTATCGCCCACCGGGGCTGCTGGGAATAGCATTCAAGCGGCC
AATTCCCTTGTTATATCGGACTTTGATCGCTCGTGCTTGAATTATCTTCA
GGATTCCGCGCTGGTCGTGATCCTCGGAAAGCATTGGCCATGGTCTACAG
TCTCTTATGCATACCACAAAATCGCAGTTAAAGAACCCATGGTCATGAGC
ATGATGTTGGCGACTACATCTAGTGAGATCAACCGGTCGCGTCTGTACGA
CCGGGACAAGACGGAGGGACCATGTACTATTGAGAGCCTGTCCGACATGG
ACAGTAGATTGCACTATGGTCGGGCTCTCTCTGGCCTCCGGGAAGCGCTG
AAACCAGACGTCAAGCCCCCGGAGCAGATCGAAGCCATCTTCATCACCTT
GTGGATGATGATTGACTATGAGAACCGATTCGGCAGCGGGACTGCTGGAA
TCAATATTCACATTCGCGGAATCGAGAGTCTACTCTTCAACCACGTCGTC
CCATCACTCAAACAAATAGGGCCTCCAGATATCGCAATTGCAGAAGCAAG
TTCAAAGACTGCACTATGTCATGTCACAGACGAGGCCCAGGGCACGAGCG
CATGTGACAGCCCTGGGCCGCAACAGACTGCCGAATTGTCCAAGAATAGG
CTTCGACATACAGCGGTCCCTCTTTTTCTGCTTTGGACTTTGTACTTTTT
CACACCGGGCGCTTTGCTCTCTGGCCCAGGCGCTGCAAGGCTCGATGCCG
ACCTCTTCCGGTTTTTCATGAAAGAGGAAGCAGGAAGTGTGGGATTGAGT
CTTTCCGAGCTATACAGGATTGGCAGACAGTCACCGTCTCGATTCTGGGG
GGATTCCTACCCCACCACAGCCCAGCTGGATGATATGGAGAATATGCCCG
GGCTATCGCTGTATCATCGAAGTCATGTACTGCAATTCAAGATTACGGAG
TTATTTCGGCAAGGAAGTCATTCGGTCACGACGGGTCTTGAGATCATTAG
TGAACTCAACATGTTATCTGATGAATACGATACCTTGTTGGGTTCCGCCA
AGTCTGCGCCCTCGTGTGAAATCGTGGGTGACGGACGTCGCGTGATGGAA
ACGATCTTTTGGGCAGCCATTACTTACTACGGCACGATCGTGTACTTCCA
CCTGTGCTTCAAAGACACCCTGGCCAAAGGTATGCAGGGTGCAGGGATGA
TGACTCTGCATGATGCCGTTTCCCAGGTTCTGGAACTCTCTTTGAAGCTA
CATCGCAGCAGACCGCACTTGATGGTGCGCATCACGTGGCCTCTCTTCAT
CGCGGGGATAGCCACATCTGACAGGATCTACCAAGACTGGGTGTCGTTTC
GGCTGCGCGAGCTTGGTCGCTATGGGCTCAACTACAGCCGGGTCAGCGCC
CGGTTTGACGAGATCATCCAAGGAGGCGATCCCTTTGCGCACGGACGAAG
GCCATTGTGCGCGCAGTAGATGCATGGGCTCGGCAGGAGGACTCGGTCCA
AGACTGGTTGTCGCACGTGTAGAATTCGCAAGGTCAAATGCGACGAAGAA
AAACTATTCGTTCCCGGTCAGGAGGAGCCACAATGCCGGCGTTGCACAGC
GGCCCGGATCGTATGTGAGTGGAAGGGCGGCCCCATCCCCCGGGGTCCAG
CAAAAAGGCCCGGAAAAGACCCTCGCTCGGTGGAAGCGCAGATGGTCCGT
CAGTCTGTTCCGTCTCCTGCACGCTCTTTATCGCCCACCGGGGCTGCTGG
GAATAGCATTCAAGCGGCCAATTCCCTTGTTATATCGGACTTTGATCGCT
CGTGCTTGAATTATCTTCAGGATTCCGCGCTGGTCGTGATCCTCGGAAAG
CATTGGCCATGGTCTACAGTCTCTTATGCATACCACAAAATCGCAGTTAA
AGAACCCATGGTCATGAGCATGATGTTGGCGACTACATCTAGTGAGATCA
ACCGGTCGCGTCTGTACGACCGGGACAAGACGGAGGGACCATGTACTATT
GAGAGCCTGTCCGACATGGACAGTAGATTGCACTATGGTCGGGCTCTCTC
TGGCCTCCGGGAAGCGCTGAAACCAGACGTCAAGCCCCCGGAGCAGATCG
AAGCCATCTTCATCACCTTGTGGATGATGATTGACTATGAGAACCGATTC
GGCAGCGGGACTGCTGGAATCAATATTCACATTCGCGGAATCGAGAGTCT
ACTCTTCAACCACGTCGTCCCATCACTCAAACAAATAGGGCCTCCAGATA
TCGCAATTGCAGAAGCAAGTTCAAAGACTGCACTATGTCATGTCACAGAC
GAGGCCCAGGGCACGAGCGCATGTGACAGCCCTGGGCCGCAACAGACTGC
CGAATTGTCCAAGAATAGGCTTCGACATACAGCGGTCCCTCTTTTTCTGC
TTTGGACTTTGTACTTTTTCACACCGGGCGCTTTGCTCTCTGGCCCAGGC
GCTGCAAGGCTCGATGCCGACCTCTTCCGGTTTTTCATGAAAGAGGAAGC
AGGAAGTGTGGGATTGAGTCTTTCCGAGCTATACAGGATTGGCAGACAGT
CACCGTCTCGATTCTGGGGGGATTCCTACCCCACCACAGCCCAGCTGGAT
GATATGGAGAATATGCCCGGGCTATCGCTGTATCATCGAAGTCATGTACT
GCAATTCAAGATTACGGAGTTATTTCGGCAAGGAAGTCATTCGGTCACGA
CGGGTCTTGAGATCATTAGTGAACTCAACATGTTATCTGATGAATACGAT
ACCTTGTTGGGTTCCGCCAAGTCTGCGCCCTCGTGTGAAATCGTGGGTGA
CGGACGTCGCGTGATGGAAACGATCTTTTGGGCAGCCATTACTTACTACG
GCACGATCGTGTACTTCCACCTGTGCTTCAAAGACACCCTGGCCAAAGGT
ATGCAGGGTGCAGGGATGATGACTCTGCATGATGCCGTTTCCCAGGTTCT
GGAACTCTCTTTGAAGCTACATCGCAGCAGACCGCACTTGATGGTGCGCA
TCACGTGGCCTCTCTTCATCGCGGGGATAGCCACATCTGACAGGATCTAC
CAAGACTGGGTGTCGTTTCGGCTGCGCGAGCTTGGTCGCTATGGGCTCAA
CTACAGCCGGGTCAGCGCCCGGTTTGACGAGATCATCCAAGGAGGCGATC
CCTTTGCGCACGGACGAAGGCCATTGTGCGCGCAGTAGATGCATGGGCTC
GGCAGGAGGACTCGGTCCAAGACTGGTTGTCGCACGTGTAGAATTCGCAA
GGTCAAATGCGACGAAGAAAAACTATTCGTTCCCGGTCAGGAGGAGCCAC
AATGCCGGCGTTGCACAGCGGCCCGGATCGTATGTGAGTGGAAGGGCGGC
CCCATCCCCCGGGGTCCAGCAAAAAGGCCCGGAAAAGACCCTCGCTCGGT
GGAAGCGCAGATGGTCCGTCAGTCTGTTCCGTCTCCTGCACGCTCTTTAT
CGCCCACCGGGGCTGCTGGGAATAGCATTCAAGCGGCCAATTCCCTTGTT
ATATCGGACTTTGATCGCTCGTGCTTGAATTATCTTCAGGATTCCGCGCT
GGTCGTGATCCTCGGAAAGCATTGGCCATGGTCTACAGTCTCTTATGCAT
ACCACAAAATCGCAGTTAAAGAACCCATGGTCATGAGCATGATGTTGGCG
ACTACATCTAGTGAGATCAACCGGTCGCGTCTGTACGACCGGGACAAGAC
GGAGGGACCATGTACTATTGAGAGCCTGTCCGACATGGACAGTAGATTGC
ACTATGGTCGGGCTCTCTCTGGCCTCCGGGAAGCGCTGAAACCAGACGTC
AAGCCCCCGGAGCAGATCGAAGCCATCTTCATCACCTTGTGGATGATGAT
TGACTATGAGAACCGATTCGGCAGCGGGACTGCTGGAATCAATATTCACA
TTCGCGGAATCGAGAGTCTACTCTTCAACCACGTCGTCCCATCACTCAAA
CAAATAGGGCCTCCAGATATCGCAATTGCAGAAGCAAGTTCAAAGACTGC
ACTATGTCATGTCACAGACGAGGCCCAGGGCACGAGCGCATGTGACAGCC
CTGGGCCGCAACAGACTGCCGAATTGTCCAAGAATAGGCTTCGACATACA
GCGGTCCCTCTTTTTCTGCTTTGGACTTTGTACTTTTTCACACCGGGCGC
TTTGCTCTCTGGCCCAGGCGCTGCAAGGCTCGATGCCGACCTCTTCCGGT
TTTTCATGAAAGAGGAAGCAGGAAGTGTGGGATTGAGTCTTTCCGAGCTA
TACAGGATTGGCAGACAGTCACCGTCTCGATTCTGGGGGGATTCCTACCC
CACCACAGCCCAGCTGGATGATATGGAGAATATGCCCGGGCTATCGCTGT
ATCATCGAAGTCATGTACTGCAATTCAAGATTACGGAGTTATTTCGGCAA
GGAAGTCATTCGGTCACGACGGGTCTTGAGATCATTAGTGAACTCAACAT
GTTATCTGATGAATACGATACCTTGTTGGGTTCCGCCAAGTCTGCGCCCT
CGTGTGAAATCGTGGGTGACGGACGTCGCGTGATGGAAACGATCTTTTGG
GCAGCCATTACTTACTACGGCACGATCGTGTACTTCCACCTGTGCTTCAA
AGACACCCTGGCCAAAGGTATGCAGGGTGCAGGGATGATGACTCTGCATG
ATGCCGTTTCCCAGGTTCTGGAACTCTCTTTGAAGCTACATCGCAGCAGA
CCGCACTTGATGGTGCGCATCACGTGGCCTCTCTTCATCGCGGGGATAGC
CACATCTGACAGGATCTACCAAGACTGGGTGTCGTTTCGGCTGCGCGAGC
TTGGTCGCTATGGGCTCAACTACAGCCGGGTCAGCGCCCGGTTTGACGAG
ATCATCCAAGGAGGCGATCCCTTTGCGCACGGACGAAGGCCATTGTGCGC
GCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:488669..490552 + |
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