|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:539949..541184+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009333-T1 ID=CBS51388_009333-T1|Name=CBS51388_009333-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1236bp|location=Sequence derived from alignment at An15:539949..541184+ (Aspergillus niger CBS 513.88)
ATGTCTCTCCGTACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTACGGCAC
CGTGCAGTCCACCACCCCCAGTGCCGCCGCCATCGCCAGCCGTATCCCAC
CTGCTCTGCGTGAAGCCACTGCCGCCACGGCACCACGCACCAACTGGACC
CGCGAAGAGATTCAACAGATTTACGAGACGCCCTTGAACCAACTTACCTA
TGCCGCTGTACGTCCATACCCTTTCCCCCTCCAATCTACACCAAATCACA
CAATATTGTAACACTCACTAACAATAATCTAAATATAGGCAGCAGTCCAC
CGCCGCTTCCACGACCCCAGCGCCATCCAAATGTGCACACTAATGAACAT
CAAAACGGGCGGCTGCAGCGAAGACTGCTCCTACTGCGCACAATCCTCCC
GCTACCAAACGGGTCTAAAAGCCACCAAGATGTCCCCAGTCGACGAAGTC
CTCGAAGCCGCCCGCATTGCCAAATCCAACGGCAGCACACGGTTCTGCAT
GGGCGCCGCGTGGCGCGACATGCGCGGCCGCAAGACCAGCCTCAAGAACA
TCAAATCCATGGTCTCTGGAGTTCGGGGCATGGGGATGGAAGTCTGCGTT
ACACTTGGAATGATCGACGAGGCACAAGCCAAGGAACTCAAAGACGCGGG
ACTCACGGCGTACAACCATAACCTGGATACATCAAGGGAGTTTTACCCGG
AGATTATCACGACGAGGTCGTACGATGAGAGATTGAAGACGTTGGAAAAT
GTGCGGGATGCCGGCATTAATGTCTGCTCTGGTGGAATTTTGGGTCTGGG
TGAGAAGGATGAGGACCGCGTGGGGTTGATCTATACGATGTCGGGGTTGG
AGAAGCATCCGGAGAGTTTCCCGGTTAATGCTCTTGTGCCGATTCCCGGA
ACGCCGCTTGGCGAGAGGAAGATGATTTCGTTTGATAAGATTCTTAGGAC
GGTCGCTACCGCGAGAGTGGTCATGCCGGCTACCATTGTGAGACTTGCTG
CGGGCAGAATTTCGTTGAGTGAGGAGCAGCAGGTTGCTTGTTTTATGGCG
GGAGCTAATGCCGTCTTTACGGGTGAGAAGATGCTTACGACCGAGTGTAA
TGGATGGGATGAGGATAGGGCCATGTTTGAGAAGTGGGGTTTCTATCCCA
TGAAGAGCTTTGAGGGGGAGCATGTTAAGGATGAGGTCAAGGTCAAGGAA
GTCGAGGGGACTGCGCAGGCCGCGGTTAGTGCGTAA back to topCoding sequence (CDS) from alignment at An15:539949..541184+ >CBS51388_009333-T1 ID=CBS51388_009333-T1|Name=CBS51388_009333-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2310bp|location=Sequence derived from alignment at An15:539949..541184+ (Aspergillus niger CBS 513.88)
ATGTCTCTCCGTACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTACGGCAC
CGTGCAGTCCACCACCCCCAGTGCCGCCGCCATCGCCAGCCGTATCCCAC
CTGCTCTGCGTGAAGCCACTGCCGCCACGGCACCACGCACCAACTGGACC
CGCGAAGAGATTCAACAGATTTACGAGACGCCCTTGAACCAACTTACCTA
TGCCGCTGCAGCAGTCCACCGCCGCTTCCACGACCCCAGCGCCATCCAAA
TGTGCACACTAATGAACATCAAAACGGGCGGCTGCAGCGAAGACTGCTCC
TACTGCGCACAATCCTCCCGCTACCAAACGGGTCTAAAAGCCACCAAGAT
GTCCCCAGTCGACGAAGTCCTCGAAGCCGCCCGCATTGCCAAATCCAACG
GCAGCACACGGTTCTGCATGGGCGCCGCGTGGCGCGACATGCGCGGCCGC
AAGACCAGCCTCAAGAACATCAAATCCATGGTCTCTGGAGTTCGGGGCAT
GGGGATGGAAGTCTGCGTTACACTTGGAATGATCGACGAGGCACAAGCCA
AGGAACTCAAAGACGCGGGACTCACGGCGTACAACCATAACCTGGATACA
TCAAGGGAGTTTTACCCGGAGATTATCACGACGAGGTCGTACGATGAGAG
ATTGAAGACGTTGGAAAATGTGCGGGATGCCGGCATTAATGTCTGCTCTG
GTGGAATTTTGGGTCTGGGTGAGAAGGATGAGGACCGCGTGGGGTTGATC
TATACGATGTCGGGGTTGGAGAAGCATCCGGAGAGTTTCCCGGTTAATGC
TCTTGTGCCGATTCCCGGAACGCCGCTTGGCGAGAGGAAGATGATTTCGT
TTGATAAGATTCTTAGGACGGTCGCTACCGCGAGAGTGGTCATGCCGGCT
ACCATTGTGAGACTTGCTGCGGGCAGAATTTCGTTGAGTGAGGAGCAGCA
GGTTGCTTGTTTTATGGCGGGAGCTAATGCCGTCTTTACGGGTGAGAAGA
TGCTTACGACCGAGTGTAATGGATGGGATGAGGATAGGGCCATGTTTGAG
AAGTGGGGTTTCTATCCCATGAAGAGCTTTGAGGGGGAGCATGTTAAGGA
TGAGGTCAAGGTCAAGGAAGTCGAGGGGACTGCGCAGGCCGCGGTTAGTG
CGTAAATGTCTCTCCGTACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTAC
GGCACCGTGCAGTCCACCACCCCCAGTGCCGCCGCCATCGCCAGCCGTAT
CCCACCTGCTCTGCGTGAAGCCACTGCCGCCACGGCACCACGCACCAACT
GGACCCGCGAAGAGATTCAACAGATTTACGAGACGCCCTTGAACCAACTT
ACCTATGCCGCTGCAGCAGTCCACCGCCGCTTCCACGACCCCAGCGCCAT
CCAAATGTGCACACTAATGAACATCAAAACGGGCGGCTGCAGCGAAGACT
GCTCCTACTGCGCACAATCCTCCCGCTACCAAACGGGTCTAAAAGCCACC
AAGATGTCCCCAGTCGACGAAGTCCTCGAAGCCGCCCGCATTGCCAAATC
CAACGGCAGCACACGGTTCTGCATGGGCGCCGCGTGGCGCGACATGCGCG
GCCGCAAGACCAGCCTCAAGAACATCAAATCCATGGTCTCTGGAGTTCGG
GGCATGGGGATGGAAGTCTGCGTTACACTTGGAATGATCGACGAGGCACA
AGCCAAGGAACTCAAAGACGCGGGACTCACGGCGTACAACCATAACCTGG
ATACATCAAGGGAGTTTTACCCGGAGATTATCACGACGAGGTCGTACGAT
GAGAGATTGAAGACGTTGGAAAATGTGCGGGATGCCGGCATTAATGTCTG
CTCTGGTGGAATTTTGGGTCTGGGTGAGAAGGATGAGGACCGCGTGGGGT
TGATCTATACGATGTCGGGGTTGGAGAAGCATCCGGAGAGTTTCCCGGTT
AATGCTCTTGTGCCGATTCCCGGAACGCCGCTTGGCGAGAGGAAGATGAT
TTCGTTTGATAAGATTCTTAGGACGGTCGCTACCGCGAGAGTGGTCATGC
CGGCTACCATTGTGAGACTTGCTGCGGGCAGAATTTCGTTGAGTGAGGAG
CAGCAGGTTGCTTGTTTTATGGCGGGAGCTAATGCCGTCTTTACGGGTGA
GAAGATGCTTACGACCGAGTGTAATGGATGGGATGAGGATAGGGCCATGT
TTGAGAAGTGGGGTTTCTATCCCATGAAGAGCTTTGAGGGGGAGCATGTT
AAGGATGAGGTCAAGGTCAAGGAAGTCGAGGGGACTGCGCAGGCCGCGGT
TAGTGCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009102 | biotin biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004076 | biotin synthase activity |
| GO:0051536 | iron-sulfur cluster binding |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024177 |
| DBxref | InterPro:IPR007197 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR002684 |
| DBxref | InterPro:IPR006638 |
| DBxref | InterPro:IPR010722 |
| DBxref | PFAM:PF04055 |
| DBxref | PFAM:PF06968 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:539949..541184 + |
|
