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CBS51388_009346-T1, CBS51388_009346-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009346-T1
Unique NameCBS51388_009346-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:584464..586165+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009346-T1 ID=CBS51388_009346-T1|Name=CBS51388_009346-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1702bp|location=Sequence derived from alignment at An15:584464..586165+ (Aspergillus niger CBS 513.88)
ATGCCGCCGACACAGACAACTGCTTCGTCTACAAGCGACAATGTTGAAAA
GTCTCTACAGGATGCCACCGTCAGTGACCCGTCGGGGTCTGCTGATGCTG
TGACCGGGCGCAAGATCACGGGTGTTGCGTGGTTTGTTGTCAACGTTGCC
CTGTTATCGGCGACTTTTCTGTATGCCCTCGACAATACCGTGACAGCAAC
GGTGCGGCCTGCCATTGTCGACACATTTGGCAACCGCATAGACATGCTAC
CATGGGTTTCAGTGGCATATCCCATGGGTGAAGTTGGCACAAATCCCATC
TGGTAAGATAATCAAGCAGCAGAGCGCACTTGGCGAATCGACTACTAACA
TTTCTGTTTACAGGGCAAAGCTCAACAAGTTCCTCAATGGCAAATTTGTC
TTTCTCGCCGCCCTGCTTATCTTCGAGGTAGGATCTGCGGTTATTGGCTC
AGCGTCGTCCATTGGCGCTGTCATCGCGGGTCGCGCTCTGGCTGGCTCCG
GCGGCTCCGGCATCTATGTCGGCACCATTAGCATGATTACTGGAATGACG
ACAGCCAAAGAACAAAACCAGTATCTCAACATTGTCGGAATGGCATGGAG
CCTGGGAACCATTCTCGGCCCCATTATCGGATCTGCGTTTGCTGATTCGC
CTGCAACATGGCGATGGGCTTTTTACATCAACATCTGCATTGCCGCCGTT
GCCGCCCCCGCATGTATCTGGATCATGCCTTCGGCGCCCCCTAGCGTGTC
TCTGGGGATCATGGACGTGATCAAGGCATTTGACCATCTGGGTGCTGTGC
TGTTTCTTGGCTCGGTCGTGTCGACAGTCATGCTGCTGGGCTTTGGCGGC
GTCGTGTACAGCTGGGATAGTGGCCAGATGATTGGACTTTACATTGCCAC
TGCTGTGCTATGGATCATGTTTGCTCTGCAGCAGAAATTCCACCTTCTCA
CGTCAGATCGTATCTTCCCCGTGCAGTTCTTCAAGGATCCCTTGGTGGTC
GGCCTGTGGATCTGGACGATTGTCGCAATTTCTGACATTGTCGTGACCAT
CTACACGCTGCCGCTGTTTTTCCAGTTTGTGCTGCATGATTCTTCGATGC
GCTCTGCAGTCTACACGCTGCCTTTTGTGGCATCCGTTGTGGTCAGTGCC
GGCATCAGCGGGGGCCTTCTGGTCAAGTTTCCGTGGTACAAATGCTGGTT
CATCTGGGCCAGTGTGCTGCTCCTTATCAGCAACGGCCTGCTGTCCAGCA
TCCACACGCACACATCTAGGGCTACCATTTGTGGCTATACCATTATCCAG
GGCTTCGGCGTCGGACCGGTCATTCAGCTTGGCTATACTGTGGGCCAGTT
GAAGCGTCCACAGGCGGCACGAAAGGATGTTACCGCGTTCTTCTCTTGTG
CACAGATGGGTGGTCTAGCCTTGTCACTGGGCATCGCCACCTCTGTTCTT
GTTAACCATGCCACGGAGGAGATATCGCACATTCTACCAAACGTTCCTCT
TAGCGAAATCAGAGGCGCCATTGATGGAGTGGGAAGTAACGTGTTCGCGA
CGTTGACCGAACAAGTTCGTGATCAGGTCACCAACGCAGTTACGCAGAGC
GTGGCCTCTGTGTTTTACCTGAATTTGTTTGGTGCAGGGCTTGGCTTCCT
CATTGCCCTTCCTCTCAAATTCGACAAGCTGGATTTCACCGCGCTGCAAT
AA
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Coding sequence (CDS) from alignment at An15:584464..586165+

>CBS51388_009346-T1 ID=CBS51388_009346-T1|Name=CBS51388_009346-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3282bp|location=Sequence derived from alignment at An15:584464..586165+ (Aspergillus niger CBS 513.88)
ATGCCGCCGACACAGACAACTGCTTCGTCTACAAGCGACAATGTTGAAAA
GTCTCTACAGGATGCCACCGTCAGTGACCCGTCGGGGTCTGCTGATGCTG
TGACCGGGCGCAAGATCACGGGTGTTGCGTGGTTTGTTGTCAACGTTGCC
CTGTTATCGGCGACTTTTCTGTATGCCCTCGACAATACCGTGACAGCAAC
GGTGCGGCCTGCCATTGTCGACACATTTGGCAACCGCATAGACATGCTAC
CATGGGTTTCAGTGGCATATCCCATGGGTGAAGTTGGCACAAATCCCATC
TGGGCAAAGCTCAACAAGTTCCTCAATGGCAAATTTGTCTTTCTCGCCGC
CCTGCTTATCTTCGAGGTAGGATCTGCGGTTATTGGCTCAGCGTCGTCCA
TTGGCGCTGTCATCGCGGGTCGCGCTCTGGCTGGCTCCGGCGGCTCCGGC
ATCTATGTCGGCACCATTAGCATGATTACTGGAATGACGACAGCCAAAGA
ACAAAACCAGTATCTCAACATTGTCGGAATGGCATGGAGCCTGGGAACCA
TTCTCGGCCCCATTATCGGATCTGCGTTTGCTGATTCGCCTGCAACATGG
CGATGGGCTTTTTACATCAACATCTGCATTGCCGCCGTTGCCGCCCCCGC
ATGTATCTGGATCATGCCTTCGGCGCCCCCTAGCGTGTCTCTGGGGATCA
TGGACGTGATCAAGGCATTTGACCATCTGGGTGCTGTGCTGTTTCTTGGC
TCGGTCGTGTCGACAGTCATGCTGCTGGGCTTTGGCGGCGTCGTGTACAG
CTGGGATAGTGGCCAGATGATTGGACTTTACATTGCCACTGCTGTGCTAT
GGATCATGTTTGCTCTGCAGCAGAAATTCCACCTTCTCACGTCAGATCGT
ATCTTCCCCGTGCAGTTCTTCAAGGATCCCTTGGTGGTCGGCCTGTGGAT
CTGGACGATTGTCGCAATTTCTGACATTGTCGTGACCATCTACACGCTGC
CGCTGTTTTTCCAGTTTGTGCTGCATGATTCTTCGATGCGCTCTGCAGTC
TACACGCTGCCTTTTGTGGCATCCGTTGTGGTCAGTGCCGGCATCAGCGG
GGGCCTTCTGGTCAAGTTTCCGTGGTACAAATGCTGGTTCATCTGGGCCA
GTGTGCTGCTCCTTATCAGCAACGGCCTGCTGTCCAGCATCCACACGCAC
ACATCTAGGGCTACCATTTGTGGCTATACCATTATCCAGGGCTTCGGCGT
CGGACCGGTCATTCAGCTTGGCTATACTGTGGGCCAGTTGAAGCGTCCAC
AGGCGGCACGAAAGGATGTTACCGCGTTCTTCTCTTGTGCACAGATGGGT
GGTCTAGCCTTGTCACTGGGCATCGCCACCTCTGTTCTTGTTAACCATGC
CACGGAGGAGATATCGCACATTCTACCAAACGTTCCTCTTAGCGAAATCA
GAGGCGCCATTGATGGAGTGGGAAGTAACGTGTTCGCGACGTTGACCGAA
CAAGTTCGTGATCAGGTCACCAACGCAGTTACGCAGAGCGTGGCCTCTGT
GTTTTACCTGAATTTGTTTGGTGCAGGGCTTGGCTTCCTCATTGCCCTTC
CTCTCAAATTCGACAAGCTGGATTTCACCGCGCTGCAATAAATGCCGCCG
ACACAGACAACTGCTTCGTCTACAAGCGACAATGTTGAAAAGTCTCTACA
GGATGCCACCGTCAGTGACCCGTCGGGGTCTGCTGATGCTGTGACCGGGC
GCAAGATCACGGGTGTTGCGTGGTTTGTTGTCAACGTTGCCCTGTTATCG
GCGACTTTTCTGTATGCCCTCGACAATACCGTGACAGCAACGGTGCGGCC
TGCCATTGTCGACACATTTGGCAACCGCATAGACATGCTACCATGGGTTT
CAGTGGCATATCCCATGGGTGAAGTTGGCACAAATCCCATCTGGGCAAAG
CTCAACAAGTTCCTCAATGGCAAATTTGTCTTTCTCGCCGCCCTGCTTAT
CTTCGAGGTAGGATCTGCGGTTATTGGCTCAGCGTCGTCCATTGGCGCTG
TCATCGCGGGTCGCGCTCTGGCTGGCTCCGGCGGCTCCGGCATCTATGTC
GGCACCATTAGCATGATTACTGGAATGACGACAGCCAAAGAACAAAACCA
GTATCTCAACATTGTCGGAATGGCATGGAGCCTGGGAACCATTCTCGGCC
CCATTATCGGATCTGCGTTTGCTGATTCGCCTGCAACATGGCGATGGGCT
TTTTACATCAACATCTGCATTGCCGCCGTTGCCGCCCCCGCATGTATCTG
GATCATGCCTTCGGCGCCCCCTAGCGTGTCTCTGGGGATCATGGACGTGA
TCAAGGCATTTGACCATCTGGGTGCTGTGCTGTTTCTTGGCTCGGTCGTG
TCGACAGTCATGCTGCTGGGCTTTGGCGGCGTCGTGTACAGCTGGGATAG
TGGCCAGATGATTGGACTTTACATTGCCACTGCTGTGCTATGGATCATGT
TTGCTCTGCAGCAGAAATTCCACCTTCTCACGTCAGATCGTATCTTCCCC
GTGCAGTTCTTCAAGGATCCCTTGGTGGTCGGCCTGTGGATCTGGACGAT
TGTCGCAATTTCTGACATTGTCGTGACCATCTACACGCTGCCGCTGTTTT
TCCAGTTTGTGCTGCATGATTCTTCGATGCGCTCTGCAGTCTACACGCTG
CCTTTTGTGGCATCCGTTGTGGTCAGTGCCGGCATCAGCGGGGGCCTTCT
GGTCAAGTTTCCGTGGTACAAATGCTGGTTCATCTGGGCCAGTGTGCTGC
TCCTTATCAGCAACGGCCTGCTGTCCAGCATCCACACGCACACATCTAGG
GCTACCATTTGTGGCTATACCATTATCCAGGGCTTCGGCGTCGGACCGGT
CATTCAGCTTGGCTATACTGTGGGCCAGTTGAAGCGTCCACAGGCGGCAC
GAAAGGATGTTACCGCGTTCTTCTCTTGTGCACAGATGGGTGGTCTAGCC
TTGTCACTGGGCATCGCCACCTCTGTTCTTGTTAACCATGCCACGGAGGA
GATATCGCACATTCTACCAAACGTTCCTCTTAGCGAAATCAGAGGCGCCA
TTGATGGAGTGGGAAGTAACGTGTTCGCGACGTTGACCGAACAAGTTCGT
GATCAGGTCACCAACGCAGTTACGCAGAGCGTGGCCTCTGTGTTTTACCT
GAATTTGTTTGGTGCAGGGCTTGGCTTCCTCATTGCCCTTCCTCTCAAAT
TCGACAAGCTGGATTTCACCGCGCTGCAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009346CBS51388_009346Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009346-T1.exon1CBS51388_009346-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009346-T1.exon2CBS51388_009346-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009346-T1.cdsCBS51388_009346-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009346-T1CBS51388_009346-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_15.1
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:584464..586165 +
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