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CBS51388_009369-T1, CBS51388_009369-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009369-T1
Unique NameCBS51388_009369-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:645510..646799-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009369-T1 ID=CBS51388_009369-T1|Name=CBS51388_009369-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1290bp|location=Sequence derived from alignment at An15:645510..646799- (Aspergillus niger CBS 513.88)
ATGGCTGCTGCTGCTAGGACGCTTCGCATAGGTCAATTGCTCCTCTCCAT
CTCTTAACGTTCTTCTCCTGCCCGTCTAGTTGCTGACATCTTCTCTCGTG
CAGGTCTCATCCCCGGTGACGGCATCGGCCGAGAGGTCATTCCGGTGAGT
CACCACCAGCAAATAGCTTCCTGTCGAAACACCAATTCTAACGAAACGCT
CTTCATCAGGCCGGCCGGAAGGTTTTGGAGTCTCTCCCCTCCTCTCTGAA
CCTCAAGTTCAGCTTCGTCGATCTCGATGCGGGCTTCGACACCTTCAAGC
GCACCGGTAGCGCTCTCCCCGATAAGACAGTCGAGATCCTCAAGAAGGAG
TGCGATGGTGCTCTGTTCGGCGCTGTCAGGTGAGTGCTACATCGATATCT
CCTGTCCTTGTCTGTCACTGAATTCCCTCCTAACTAATCTCTGTAGCTCC
CCTAGCACCAAGGTCGCCGGCTACTCCTCTCCCATCGTCGCCCTCCGTAA
GAAGCTTGACCTGTACGCCAACGTCCGCCCCGTCAAGACCACCGCCGGCA
GCACCGACGGCAAGCCCATTGACCTGGTGATTGTTCGTGAGAACACCGAG
GATCTCTACGTCAAGGAAGAGCAGACCAAGGAGACCCCCAATGGCAAGGT
TGCCGAGGCTATCAAGCGTATCTCCGAGAACGCTTCCTCCCGCATCTCCA
CCATTGCCGGTGAAATTGCCCTCCGTCGCCAGAAGATCCGCAGCGTTGCT
GGTATCGCTGGCCTCCGCACCGAACCCATGGTGACCATCACCCACAAGTC
CAACGTTCTCTCTCAGACCGACGGTCTCTTCCGTGAGACCGCCCGTAAGG
CCCTTTCCGCCGACCGCTTCTCCTCTGTCCAGGTTGAGGAGCAGATCGTC
GACTCCATGGTTTACAAGCTCTTCCGTCAGCCCGAATACTACGACGTCAT
TGTCGCCCCCAACTTGTACGGTGATATCCTGTCGGATGGTGCTGCTGCCC
TGGTTGGTAGTCTGGGACTGGTTCCTAGCGCTAACGTTGGTGATGGCTTC
GCCATCGGTGAGCCCTGCCACGGCAGTGCCCCCGACATTGAGGGCAAGGG
TATTGCCAACCCCATCGCCACTCTGCGCAGTGTTGCCCTGATGCTGGAGT
TCTTGGGTGAGGAGACTGCCGCTGCCAAGATCTACACTGCTGTTGATGCC
AACCTTGATGAGGCCAAGTTCCTTTCTCCTGACATGGGCGGTAAGGCTAC
TACCCAGGAGGTTTTGGATGATGTCCTGAAGAGGCTGTAA
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Coding sequence (CDS) from alignment at An15:645510..646799-

>CBS51388_009369-T1 ID=CBS51388_009369-T1|Name=CBS51388_009369-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4344bp|location=Sequence derived from alignment at An15:645510..646799- (Aspergillus niger CBS 513.88)
CTCCCCTAGCACCAAGGTCGCCGGCTACTCCTCTCCCATCGTCGCCCTCC
GTAAGAAGCTTGACCTGTACGCCAACGTCCGCCCCGTCAAGACCACCGCC
GGCAGCACCGACGGCAAGCCCATTGACCTGGTGATTGTTCGTGAGAACAC
CGAGGATCTCTACGTCAAGGAAGAGCAGACCAAGGAGACCCCCAATGGCA
AGGTTGCCGAGGCTATCAAGCGTATCTCCGAGAACGCTTCCTCCCGCATC
TCCACCATTGCCGGTGAAATTGCCCTCCGTCGCCAGAAGATCCGCAGCGT
TGCTGGTATCGCTGGCCTCCGCACCGAACCCATGGTGACCATCACCCACA
AGTCCAACGTTCTCTCTCAGACCGACGGTCTCTTCCGTGAGACCGCCCGT
AAGGCCCTTTCCGCCGACCGCTTCTCCTCTGTCCAGGTTGAGGAGCAGAT
CGTCGACTCCATGGTTTACAAGCTCTTCCGTCAGCCCGAATACTACGACG
TCATTGTCGCCCCCAACTTGTACGGTGATATCCTGTCGGATGGTGCTGCT
GCCCTGGTTGGTAGTCTGGGACTGGTTCCTAGCGCTAACGTTGGTGATGG
CTTCGCCATCGGTGAGCCCTGCCACGGCAGTGCCCCCGACATTGAGGGCA
AGGGTATTGCCAACCCCATCGCCACTCTGCGCAGTGTTGCCCTGATGCTG
GAGTTCTTGGGTGAGGAGACTGCCGCTGCCAAGATCTACACTGCTGTTGA
TGCCAACCTTGATGAGGCCAAGTTCCTTTCTCCTGACATGGGCGGTAAGG
CTACTACCCAGGAGGTTTTGGATGATGTCCTGAAGAGGCTGTAAGCCGGC
CGGAAGGTTTTGGAGTCTCTCCCCTCCTCTCTGAACCTCAAGTTCAGCTT
CGTCGATCTCGATGCGGGCTTCGACACCTTCAAGCGCACCGGTAGCGCTC
TCCCCGATAAGACAGTCGAGATCCTCAAGAAGGAGTGCGATGGTGCTCTG
TTCGGCGCTGTCAGGTCTCATCCCCGGTGACGGCATCGGCCGAGAGGTCA
TTCCGATGGCTGCTGCTGCTAGGACGCTTCGCATAGCTCCCCTAGCACCA
AGGTCGCCGGCTACTCCTCTCCCATCGTCGCCCTCCGTAAGAAGCTTGAC
CTGTACGCCAACGTCCGCCCCGTCAAGACCACCGCCGGCAGCACCGACGG
CAAGCCCATTGACCTGGTGATTGTTCGTGAGAACACCGAGGATCTCTACG
TCAAGGAAGAGCAGACCAAGGAGACCCCCAATGGCAAGGTTGCCGAGGCT
ATCAAGCGTATCTCCGAGAACGCTTCCTCCCGCATCTCCACCATTGCCGG
TGAAATTGCCCTCCGTCGCCAGAAGATCCGCAGCGTTGCTGGTATCGCTG
GCCTCCGCACCGAACCCATGGTGACCATCACCCACAAGTCCAACGTTCTC
TCTCAGACCGACGGTCTCTTCCGTGAGACCGCCCGTAAGGCCCTTTCCGC
CGACCGCTTCTCCTCTGTCCAGGTTGAGGAGCAGATCGTCGACTCCATGG
TTTACAAGCTCTTCCGTCAGCCCGAATACTACGACGTCATTGTCGCCCCC
AACTTGTACGGTGATATCCTGTCGGATGGTGCTGCTGCCCTGGTTGGTAG
TCTGGGACTGGTTCCTAGCGCTAACGTTGGTGATGGCTTCGCCATCGGTG
AGCCCTGCCACGGCAGTGCCCCCGACATTGAGGGCAAGGGTATTGCCAAC
CCCATCGCCACTCTGCGCAGTGTTGCCCTGATGCTGGAGTTCTTGGGTGA
GGAGACTGCCGCTGCCAAGATCTACACTGCTGTTGATGCCAACCTTGATG
AGGCCAAGTTCCTTTCTCCTGACATGGGCGGTAAGGCTACTACCCAGGAG
GTTTTGGATGATGTCCTGAAGAGGCTGTAAGCCGGCCGGAAGGTTTTGGA
GTCTCTCCCCTCCTCTCTGAACCTCAAGTTCAGCTTCGTCGATCTCGATG
CGGGCTTCGACACCTTCAAGCGCACCGGTAGCGCTCTCCCCGATAAGACA
GTCGAGATCCTCAAGAAGGAGTGCGATGGTGCTCTGTTCGGCGCTGTCAG
GTCTCATCCCCGGTGACGGCATCGGCCGAGAGGTCATTCCGATGGCTGCT
GCTGCTAGGACGCTTCGCATAGCTCCCCTAGCACCAAGGTCGCCGGCTAC
TCCTCTCCCATCGTCGCCCTCCGTAAGAAGCTTGACCTGTACGCCAACGT
CCGCCCCGTCAAGACCACCGCCGGCAGCACCGACGGCAAGCCCATTGACC
TGGTGATTGTTCGTGAGAACACCGAGGATCTCTACGTCAAGGAAGAGCAG
ACCAAGGAGACCCCCAATGGCAAGGTTGCCGAGGCTATCAAGCGTATCTC
CGAGAACGCTTCCTCCCGCATCTCCACCATTGCCGGTGAAATTGCCCTCC
GTCGCCAGAAGATCCGCAGCGTTGCTGGTATCGCTGGCCTCCGCACCGAA
CCCATGGTGACCATCACCCACAAGTCCAACGTTCTCTCTCAGACCGACGG
TCTCTTCCGTGAGACCGCCCGTAAGGCCCTTTCCGCCGACCGCTTCTCCT
CTGTCCAGGTTGAGGAGCAGATCGTCGACTCCATGGTTTACAAGCTCTTC
CGTCAGCCCGAATACTACGACGTCATTGTCGCCCCCAACTTGTACGGTGA
TATCCTGTCGGATGGTGCTGCTGCCCTGGTTGGTAGTCTGGGACTGGTTC
CTAGCGCTAACGTTGGTGATGGCTTCGCCATCGGTGAGCCCTGCCACGGC
AGTGCCCCCGACATTGAGGGCAAGGGTATTGCCAACCCCATCGCCACTCT
GCGCAGTGTTGCCCTGATGCTGGAGTTCTTGGGTGAGGAGACTGCCGCTG
CCAAGATCTACACTGCTGTTGATGCCAACCTTGATGAGGCCAAGTTCCTT
TCTCCTGACATGGGCGGTAAGGCTACTACCCAGGAGGTTTTGGATGATGT
CCTGAAGAGGCTGTAAGCCGGCCGGAAGGTTTTGGAGTCTCTCCCCTCCT
CTCTGAACCTCAAGTTCAGCTTCGTCGATCTCGATGCGGGCTTCGACACC
TTCAAGCGCACCGGTAGCGCTCTCCCCGATAAGACAGTCGAGATCCTCAA
GAAGGAGTGCGATGGTGCTCTGTTCGGCGCTGTCAGGTCTCATCCCCGGT
GACGGCATCGGCCGAGAGGTCATTCCGATGGCTGCTGCTGCTAGGACGCT
TCGCATAGCTCCCCTAGCACCAAGGTCGCCGGCTACTCCTCTCCCATCGT
CGCCCTCCGTAAGAAGCTTGACCTGTACGCCAACGTCCGCCCCGTCAAGA
CCACCGCCGGCAGCACCGACGGCAAGCCCATTGACCTGGTGATTGTTCGT
GAGAACACCGAGGATCTCTACGTCAAGGAAGAGCAGACCAAGGAGACCCC
CAATGGCAAGGTTGCCGAGGCTATCAAGCGTATCTCCGAGAACGCTTCCT
CCCGCATCTCCACCATTGCCGGTGAAATTGCCCTCCGTCGCCAGAAGATC
CGCAGCGTTGCTGGTATCGCTGGCCTCCGCACCGAACCCATGGTGACCAT
CACCCACAAGTCCAACGTTCTCTCTCAGACCGACGGTCTCTTCCGTGAGA
CCGCCCGTAAGGCCCTTTCCGCCGACCGCTTCTCCTCTGTCCAGGTTGAG
GAGCAGATCGTCGACTCCATGGTTTACAAGCTCTTCCGTCAGCCCGAATA
CTACGACGTCATTGTCGCCCCCAACTTGTACGGTGATATCCTGTCGGATG
GTGCTGCTGCCCTGGTTGGTAGTCTGGGACTGGTTCCTAGCGCTAACGTT
GGTGATGGCTTCGCCATCGGTGAGCCCTGCCACGGCAGTGCCCCCGACAT
TGAGGGCAAGGGTATTGCCAACCCCATCGCCACTCTGCGCAGTGTTGCCC
TGATGCTGGAGTTCTTGGGTGAGGAGACTGCCGCTGCCAAGATCTACACT
GCTGTTGATGCCAACCTTGATGAGGCCAAGTTCCTTTCTCCTGACATGGG
CGGTAAGGCTACTACCCAGGAGGTTTTGGATGATGTCCTGAAGAGGCTGT
AAGCCGGCCGGAAGGTTTTGGAGTCTCTCCCCTCCTCTCTGAACCTCAAG
TTCAGCTTCGTCGATCTCGATGCGGGCTTCGACACCTTCAAGCGCACCGG
TAGCGCTCTCCCCGATAAGACAGTCGAGATCCTCAAGAAGGAGTGCGATG
GTGCTCTGTTCGGCGCTGTCAGGTCTCATCCCCGGTGACGGCATCGGCCG
AGAGGTCATTCCGATGGCTGCTGCTGCTAGGACGCTTCGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0000287magnesium ion binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LYS12CBS51388_009369Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009369-T1CBS51388_009369-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009369-T1.cdsCBS51388_009369-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009369-T1.exon4CBS51388_009369-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_009369-T1.exon3CBS51388_009369-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009369-T1.exon2CBS51388_009369-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009369-T1.exon1CBS51388_009369-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
Producthomoisocitrate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:645510..646799 -
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