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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:698630..700517+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009389-T1 ID=CBS51388_009389-T1|Name=CBS51388_009389-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1888bp|location=Sequence derived from alignment at An15:698630..700517+ (Aspergillus niger CBS 513.88)
ATGCAGTCCATGCAAAGGCAGTTTGGCCGACTCATGAAAAGGTCGGCCGA
TGACAGCCAGGTGGCAATTCTCCTCAAGGATTTTGAAGAAGCAGACAAAA
TCTTGGGACGAGTAAGTATTTCTATATGTATTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCCC
CATCCACCATGCTTTAGCGTGCACTTCCCTGCGGGGTGTGATTTGTTGAT
ATCCTTCCGTATCTTGAACTGACAGCAACTCTTCCGCATTCCGACAGATC
ATCGATTCCACCAGCGCATGGCGCGATGCTTGGTCGTCCCTCTTGACGCA
CCAAAATCGAATGCTGAGCGAATTCGAAGGTCTATATGCTCCCATTCTCG
GTTCCTCCGACTCTTCTGCGCCACAGCCTGCCCCAACTCCAGAGGCCACC
TTGGCTCGGACCAACAAGCTCCGCGAGCATTATGAAGACCTCCGAAAGGA
TCTACTGGGGGACCTGGCTGCCATCGATGATCGCATGATCCGACCAGCGT
CGCAAGCTAGGGAATTCATAAGCCCAGTCAAGAAGACCATCAAAAAGCGA
GATGATCGAAAGGTGCGCATTATCTCGCATGGGGACCTATAGTAACCCCG
TTCCTGGCCTCCCGCTCAGGAACCCGCCCATCAATGCAACCATCCCATGC
TAATTCTATTCTTGTTCTAGTTGGACTTCGAGCGCTACCAAGGGCGCGTA
GACAGCTATGCCAAAAAGACAAAGCGATCAGACCGGGACAACGCAGCTCT
TGCCAAGGCAGAGAGTGACCTTGCCAAAGCAACCGAGGTACGAGCCCATT
ATTCCGGGCACAATTACCATCAGTCCATCTCTGTTTCGTTTCTAACGATC
GCAGGACTACCACGCAGCGGATGACCACTTGCGAGAATGTCTACCACCTT
TGATTGCCGCCGCATTCTCGCTGCTCCCTCGTCTGCTCGCCACGCAGATT
GAGATCCAAAACACCATGCTAGCCAACTACTATACCGTAGTACACAACTA
CTGCCAGGAGGCGCAATTCCCATCGCCTGCTCCCCCAATGGAGCAAGTCA
TCCAGGAATGGGAACGCGACCACCTCCCCGTCCAGCAAGAAGTAGAGGCA
TTCGGCTGCATCGTCAACGGCAAAACCGTGAAAATGTCCCAAGTCCCCGA
GGAATCACGAACCTCCCGCATCACCAGCCGTCTCCCAGCAATCAACGGAT
CCTCATTCTCCCGTCGCCCTTCAAACAGCGAAACCCCTCCACCCAAGCCG
CCACGGCCCACTTCACCTTCTGCCACAGCTACAGCTACAGCTTTCAGCAA
CAAAAAGCTCCCCCCACCACCCAAACCATCCTACGACACCAAACCATCCC
CAGTCTTCGAAACGAAACCTCGATTAGCCTCTTCAGCTTCTAACAACAAC
CTCACCATCCCCTCCAACTACCATCTCTCCCCGCAACCATCCTCTTCCCC
AGGCACAGAGTCCTACTACTCAGCAACTGAGCACGCCCGCACTCCATCCC
CGGGCCCCTCATCCTCCGTCGCGGCCCGCGCCGACTATTTCAGTCGAATC
CAGCCTTCAGCAACACCAGCCAGCGCCATCAGAGCAACCTCCCCCGGCGT
TAGTGCCCTAGTTGCCGGAAAGAAGAAGCCCCCGCCGCCACCCCCACCGC
GGGCTAACTCGAGCACTGCGCTATACGTGACGGCCCTGTATGACTTCGGA
GGTCAAAGCGCGGGGGATCTGGCTTTCCGGGAGGGAGATCGGATCCGTGT
CCTGAAGAAGACGGATAGTACGGATGATTGGTGGGAGGGGGAGTTACGTG
GGGTGAAGGGGAGCTTTCCGGCTAATTATGTGGAGTGA back to topCoding sequence (CDS) from alignment at An15:698630..700517+ >CBS51388_009389-T1 ID=CBS51388_009389-T1|Name=CBS51388_009389-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6108bp|location=Sequence derived from alignment at An15:698630..700517+ (Aspergillus niger CBS 513.88)
ATGCAGTCCATGCAAAGGCAGTTTGGCCGACTCATGAAAAGGTCGGCCGA
TGACAGCCAGGTGGCAATTCTCCTCAAGGATTTTGAAGAAGCAGACAAAA
TCTTGGGACGAATCATCGATTCCACCAGCGCATGGCGCGATGCTTGGTCG
TCCCTCTTGACGCACCAAAATCGAATGCTGAGCGAATTCGAAGGTCTATA
TGCTCCCATTCTCGGTTCCTCCGACTCTTCTGCGCCACAGCCTGCCCCAA
CTCCAGAGGCCACCTTGGCTCGGACCAACAAGCTCCGCGAGCATTATGAA
GACCTCCGAAAGGATCTACTGGGGGACCTGGCTGCCATCGATGATCGCAT
GATCCGACCAGCGTCGCAAGCTAGGGAATTCATAAGCCCAGTCAAGAAGA
CCATCAAAAAGCGAGATGATCGAAAGTTGGACTTCGAGCGCTACCAAGGG
CGCGTAGACAGCTATGCCAAAAAGACAAAGCGATCAGACCGGGACAACGC
AGCTCTTGCCAAGGCAGAGAGTGACCTTGCCAAAGCAACCGAGGACTACC
ACGCAGCGGATGACCACTTGCGAGAATGTCTACCACCTTTGATTGCCGCC
GCATTCTCGCTGCTCCCTCGTCTGCTCGCCACGCAGATTGAGATCCAAAA
CACCATGCTAGCCAACTACTATACCGTAGTACACAACTACTGCCAGGAGG
CGCAATTCCCATCGCCTGCTCCCCCAATGGAGCAAGTCATCCAGGAATGG
GAACGCGACCACCTCCCCGTCCAGCAAGAAGTAGAGGCATTCGGCTGCAT
CGTCAACGGCAAAACCGTGAAAATGTCCCAAGTCCCCGAGGAATCACGAA
CCTCCCGCATCACCAGCCGTCTCCCAGCAATCAACGGATCCTCATTCTCC
CGTCGCCCTTCAAACAGCGAAACCCCTCCACCCAAGCCGCCACGGCCCAC
TTCACCTTCTGCCACAGCTACAGCTACAGCTTTCAGCAACAAAAAGCTCC
CCCCACCACCCAAACCATCCTACGACACCAAACCATCCCCAGTCTTCGAA
ACGAAACCTCGATTAGCCTCTTCAGCTTCTAACAACAACCTCACCATCCC
CTCCAACTACCATCTCTCCCCGCAACCATCCTCTTCCCCAGGCACAGAGT
CCTACTACTCAGCAACTGAGCACGCCCGCACTCCATCCCCGGGCCCCTCA
TCCTCCGTCGCGGCCCGCGCCGACTATTTCAGTCGAATCCAGCCTTCAGC
AACACCAGCCAGCGCCATCAGAGCAACCTCCCCCGGCGTTAGTGCCCTAG
TTGCCGGAAAGAAGAAGCCCCCGCCGCCACCCCCACCGCGGGCTAACTCG
AGCACTGCGCTATACGTGACGGCCCTGTATGACTTCGGAGGTCAAAGCGC
GGGGGATCTGGCTTTCCGGGAGGGAGATCGGATCCGTGTCCTGAAGAAGA
CGGATAGTACGGATGATTGGTGGGAGGGGGAGTTACGTGGGGTGAAGGGG
AGCTTTCCGGCTAATTATGTGGAGTGAATGCAGTCCATGCAAAGGCAGTT
TGGCCGACTCATGAAAAGGTCGGCCGATGACAGCCAGGTGGCAATTCTCC
TCAAGGATTTTGAAGAAGCAGACAAAATCTTGGGACGAATCATCGATTCC
ACCAGCGCATGGCGCGATGCTTGGTCGTCCCTCTTGACGCACCAAAATCG
AATGCTGAGCGAATTCGAAGGTCTATATGCTCCCATTCTCGGTTCCTCCG
ACTCTTCTGCGCCACAGCCTGCCCCAACTCCAGAGGCCACCTTGGCTCGG
ACCAACAAGCTCCGCGAGCATTATGAAGACCTCCGAAAGGATCTACTGGG
GGACCTGGCTGCCATCGATGATCGCATGATCCGACCAGCGTCGCAAGCTA
GGGAATTCATAAGCCCAGTCAAGAAGACCATCAAAAAGCGAGATGATCGA
AAGTTGGACTTCGAGCGCTACCAAGGGCGCGTAGACAGCTATGCCAAAAA
GACAAAGCGATCAGACCGGGACAACGCAGCTCTTGCCAAGGCAGAGAGTG
ACCTTGCCAAAGCAACCGAGGACTACCACGCAGCGGATGACCACTTGCGA
GAATGTCTACCACCTTTGATTGCCGCCGCATTCTCGCTGCTCCCTCGTCT
GCTCGCCACGCAGATTGAGATCCAAAACACCATGCTAGCCAACTACTATA
CCGTAGTACACAACTACTGCCAGGAGGCGCAATTCCCATCGCCTGCTCCC
CCAATGGAGCAAGTCATCCAGGAATGGGAACGCGACCACCTCCCCGTCCA
GCAAGAAGTAGAGGCATTCGGCTGCATCGTCAACGGCAAAACCGTGAAAA
TGTCCCAAGTCCCCGAGGAATCACGAACCTCCCGCATCACCAGCCGTCTC
CCAGCAATCAACGGATCCTCATTCTCCCGTCGCCCTTCAAACAGCGAAAC
CCCTCCACCCAAGCCGCCACGGCCCACTTCACCTTCTGCCACAGCTACAG
CTACAGCTTTCAGCAACAAAAAGCTCCCCCCACCACCCAAACCATCCTAC
GACACCAAACCATCCCCAGTCTTCGAAACGAAACCTCGATTAGCCTCTTC
AGCTTCTAACAACAACCTCACCATCCCCTCCAACTACCATCTCTCCCCGC
AACCATCCTCTTCCCCAGGCACAGAGTCCTACTACTCAGCAACTGAGCAC
GCCCGCACTCCATCCCCGGGCCCCTCATCCTCCGTCGCGGCCCGCGCCGA
CTATTTCAGTCGAATCCAGCCTTCAGCAACACCAGCCAGCGCCATCAGAG
CAACCTCCCCCGGCGTTAGTGCCCTAGTTGCCGGAAAGAAGAAGCCCCCG
CCGCCACCCCCACCGCGGGCTAACTCGAGCACTGCGCTATACGTGACGGC
CCTGTATGACTTCGGAGGTCAAAGCGCGGGGGATCTGGCTTTCCGGGAGG
GAGATCGGATCCGTGTCCTGAAGAAGACGGATAGTACGGATGATTGGTGG
GAGGGGGAGTTACGTGGGGTGAAGGGGAGCTTTCCGGCTAATTATGTGGA
GTGAATGCAGTCCATGCAAAGGCAGTTTGGCCGACTCATGAAAAGGTCGG
CCGATGACAGCCAGGTGGCAATTCTCCTCAAGGATTTTGAAGAAGCAGAC
AAAATCTTGGGACGAATCATCGATTCCACCAGCGCATGGCGCGATGCTTG
GTCGTCCCTCTTGACGCACCAAAATCGAATGCTGAGCGAATTCGAAGGTC
TATATGCTCCCATTCTCGGTTCCTCCGACTCTTCTGCGCCACAGCCTGCC
CCAACTCCAGAGGCCACCTTGGCTCGGACCAACAAGCTCCGCGAGCATTA
TGAAGACCTCCGAAAGGATCTACTGGGGGACCTGGCTGCCATCGATGATC
GCATGATCCGACCAGCGTCGCAAGCTAGGGAATTCATAAGCCCAGTCAAG
AAGACCATCAAAAAGCGAGATGATCGAAAGTTGGACTTCGAGCGCTACCA
AGGGCGCGTAGACAGCTATGCCAAAAAGACAAAGCGATCAGACCGGGACA
ACGCAGCTCTTGCCAAGGCAGAGAGTGACCTTGCCAAAGCAACCGAGGAC
TACCACGCAGCGGATGACCACTTGCGAGAATGTCTACCACCTTTGATTGC
CGCCGCATTCTCGCTGCTCCCTCGTCTGCTCGCCACGCAGATTGAGATCC
AAAACACCATGCTAGCCAACTACTATACCGTAGTACACAACTACTGCCAG
GAGGCGCAATTCCCATCGCCTGCTCCCCCAATGGAGCAAGTCATCCAGGA
ATGGGAACGCGACCACCTCCCCGTCCAGCAAGAAGTAGAGGCATTCGGCT
GCATCGTCAACGGCAAAACCGTGAAAATGTCCCAAGTCCCCGAGGAATCA
CGAACCTCCCGCATCACCAGCCGTCTCCCAGCAATCAACGGATCCTCATT
CTCCCGTCGCCCTTCAAACAGCGAAACCCCTCCACCCAAGCCGCCACGGC
CCACTTCACCTTCTGCCACAGCTACAGCTACAGCTTTCAGCAACAAAAAG
CTCCCCCCACCACCCAAACCATCCTACGACACCAAACCATCCCCAGTCTT
CGAAACGAAACCTCGATTAGCCTCTTCAGCTTCTAACAACAACCTCACCA
TCCCCTCCAACTACCATCTCTCCCCGCAACCATCCTCTTCCCCAGGCACA
GAGTCCTACTACTCAGCAACTGAGCACGCCCGCACTCCATCCCCGGGCCC
CTCATCCTCCGTCGCGGCCCGCGCCGACTATTTCAGTCGAATCCAGCCTT
CAGCAACACCAGCCAGCGCCATCAGAGCAACCTCCCCCGGCGTTAGTGCC
CTAGTTGCCGGAAAGAAGAAGCCCCCGCCGCCACCCCCACCGCGGGCTAA
CTCGAGCACTGCGCTATACGTGACGGCCCTGTATGACTTCGGAGGTCAAA
GCGCGGGGGATCTGGCTTTCCGGGAGGGAGATCGGATCCGTGTCCTGAAG
AAGACGGATAGTACGGATGATTGGTGGGAGGGGGAGTTACGTGGGGTGAA
GGGGAGCTTTCCGGCTAATTATGTGGAGTGAATGCAGTCCATGCAAAGGC
AGTTTGGCCGACTCATGAAAAGGTCGGCCGATGACAGCCAGGTGGCAATT
CTCCTCAAGGATTTTGAAGAAGCAGACAAAATCTTGGGACGAATCATCGA
TTCCACCAGCGCATGGCGCGATGCTTGGTCGTCCCTCTTGACGCACCAAA
ATCGAATGCTGAGCGAATTCGAAGGTCTATATGCTCCCATTCTCGGTTCC
TCCGACTCTTCTGCGCCACAGCCTGCCCCAACTCCAGAGGCCACCTTGGC
TCGGACCAACAAGCTCCGCGAGCATTATGAAGACCTCCGAAAGGATCTAC
TGGGGGACCTGGCTGCCATCGATGATCGCATGATCCGACCAGCGTCGCAA
GCTAGGGAATTCATAAGCCCAGTCAAGAAGACCATCAAAAAGCGAGATGA
TCGAAAGTTGGACTTCGAGCGCTACCAAGGGCGCGTAGACAGCTATGCCA
AAAAGACAAAGCGATCAGACCGGGACAACGCAGCTCTTGCCAAGGCAGAG
AGTGACCTTGCCAAAGCAACCGAGGACTACCACGCAGCGGATGACCACTT
GCGAGAATGTCTACCACCTTTGATTGCCGCCGCATTCTCGCTGCTCCCTC
GTCTGCTCGCCACGCAGATTGAGATCCAAAACACCATGCTAGCCAACTAC
TATACCGTAGTACACAACTACTGCCAGGAGGCGCAATTCCCATCGCCTGC
TCCCCCAATGGAGCAAGTCATCCAGGAATGGGAACGCGACCACCTCCCCG
TCCAGCAAGAAGTAGAGGCATTCGGCTGCATCGTCAACGGCAAAACCGTG
AAAATGTCCCAAGTCCCCGAGGAATCACGAACCTCCCGCATCACCAGCCG
TCTCCCAGCAATCAACGGATCCTCATTCTCCCGTCGCCCTTCAAACAGCG
AAACCCCTCCACCCAAGCCGCCACGGCCCACTTCACCTTCTGCCACAGCT
ACAGCTACAGCTTTCAGCAACAAAAAGCTCCCCCCACCACCCAAACCATC
CTACGACACCAAACCATCCCCAGTCTTCGAAACGAAACCTCGATTAGCCT
CTTCAGCTTCTAACAACAACCTCACCATCCCCTCCAACTACCATCTCTCC
CCGCAACCATCCTCTTCCCCAGGCACAGAGTCCTACTACTCAGCAACTGA
GCACGCCCGCACTCCATCCCCGGGCCCCTCATCCTCCGTCGCGGCCCGCG
CCGACTATTTCAGTCGAATCCAGCCTTCAGCAACACCAGCCAGCGCCATC
AGAGCAACCTCCCCCGGCGTTAGTGCCCTAGTTGCCGGAAAGAAGAAGCC
CCCGCCGCCACCCCCACCGCGGGCTAACTCGAGCACTGCGCTATACGTGA
CGGCCCTGTATGACTTCGGAGGTCAAAGCGCGGGGGATCTGGCTTTCCGG
GAGGGAGATCGGATCCGTGTCCTGAAGAAGACGGATAGTACGGATGATTG
GTGGGAGGGGGAGTTACGTGGGGTGAAGGGGAGCTTTCCGGCTAATTATG
TGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036028 |
| DBxref | InterPro:IPR004148 |
| DBxref | InterPro:IPR027267 |
| DBxref | InterPro:IPR001452 |
| DBxref | PFAM:PF14604 |
| DBxref | PFAM:PF07653 |
| DBxref | PFAM:PF00018 |
| DBxref | PFAM:PF03114 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:698630..700517 + |
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