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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:801183..803366+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009418-T1 ID=CBS51388_009418-T1|Name=CBS51388_009418-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2184bp|location=Sequence derived from alignment at An15:801183..803366+ (Aspergillus niger CBS 513.88)
ATGGGAGGAAACAAGCGCAAGCGCACAGAGGCTGGATGTTCAGATGACGA
AGATCCAGTAAGAAACAGCTCAGATGCGAATAGCTTTGGCGTTGCTCAAA
CGCTTTCGCTCCTAAACTCGGGCAAGACAAAGTCTCAGAACGATATCGAC
TCGGAAGAACCTGGGAAGGCGCAGGATGATATGCCGAAGGAAAGAGCTTC
GAAGAAGAAGCGCGTGGATGGGGAGAAGACAAAATACCCCGTCCTTACCT
ATGTTGAAGGAAAATTGCAATCATCCATCCGGATCTCCGATCTCCAGAGT
CTGCTACTCTACTGCTTTGCTGATGGCGTCGCGCCGCAGTGGATCTCAAT
CAAACACTCTGGTCATGTTAGGAAGATTGTCGTGCTGATGGTGCCTGGTC
TGGAACTGGGCATGTTCGATGGTTCACTTCCTTTGGATGCAGATTCTGTT
ACTGAGAAGGAGACGGAAGAACCTGCCGGTGCGGGCAAGGCAATGGAGGA
GGATACAAAAGCGGAAGAATTTGCTCGCTGGAAGCAAGGCTTGCCGCTGG
AGGACCGGTCACATCGGTTCAATCCTCGCCCTCTTTCGCGTGGTGACCTT
CCGGCTCCCCTACAACCGCTAGCGGACATGTTTCCTCACGCCTGGCCCGT
AAAAGCCCCCGGTGATTCCAAGTACAACAAGATCCACTCTCCACTTCAAG
CCATACTTCTATCTGCTCTACCGAAGGGCAAGGACAGTAACACGAAGGGA
GTAAAACCTCCCAAGGTGGACAAGAGTATCGCCTTCCAGCGTACACCAAT
CACCACTTTTATCAGTTCCCTGGAAGATCTCCGGGAGAATGACTATGTGC
TTCATCCGGCTCTGCTCGCCACAGAACAAGAGAAGTCGACTTTGTTGGAA
AACCGTAAGCGGGCCGGACATTCCAAGGAAGATGGATGGGTAGATACTCA
CGTCGAGAGCTTGGAGGCTGGTCAGGTACCAGACTCTGAAATCCAGCAAG
GCAGCATGACCGCAGGCCGGGATGTGCTAGCGTTGGATTGCGAGATGTGC
ATAACTGAAGGTGGCCAATCCGAGCTCACGCGCATTAGCATGGTCCGCTG
GGATGGTGAAGTCGTACTAGATGAGTTGGTGAAACCCCAGCGACCTATCA
TCGACTATTTGACTCGTTTCTCCGGTATCACGAAAGAATTACTCGATCCT
GTCACCACCACCCTTGCCGATGTCCAGCAGAAGCTTCTCTCCCTCCTTAC
TCCTCGTACCATTCTCGTCGGCCACTCTCTCAATTCCGATTTTAACGCCC
TGAAACTCACTCACCCGTTTATTGTCGACACCACATTTATTTACCCCCAT
CCCCGCGGGCCGCCGCTCAAGTGCAGTTTGAGATGGCTCACCCAGAAGTA
TCTCGGAAAAGAGATCCAGAAGGGCCAGACCGGCCATGACTCGATCGAAG
ATGCGCGCGCAGTGCTCGAACTTGTGAAGCAGAAGTGCGAAAAGGGTGAG
CGCTGGGGCACCAGTGAGGCATCGAACGAGAGTATTTTCAAGCGCCTCGC
ACGCTCCATGCGTTCGGGGAAATCGGCCACCAACGAAGGCCGCACCGGCG
CTGTTGTCGACTGGGGCAACCCCGAGCGCGGCTTTGGGTCGCAGGCGACT
GCGTCGATCGGGTGCAGCAACGACACCGATGTAGTAAATGGCATCTCGAA
GGTAGTCAACGGCGACGACAGCAACCCCTCCATTCCCGGAGGTGGTGTTG
ACTTCACATGGGCTAGGTTGCGTGAGCTTGAAGTTTATCGCGGCTGGTGC
AATCGGATGCCCGACCCCAACAACGCCAACGAGTCGACGACGCTCGTTCC
CCCTCCTGAAGAAACGACTCCGACATCCGCCGCCGTCTCCCCCACCAAAG
AAGCCACTCGCAACCTCGCCGACACCGTCTCTCGTACCGTCTCCAACATC
CACCAAATCTACCAATCCCTCCCACCTTGCACGTTATTCCTTGTCTACTC
TGGTACCGGAGATCCCCGCGAAGTCAGCCGCCTCCAAGCCATGCACAAGA
CCTTCCGCGAAGAATTTAACTCCCGCAAACCGTGGGATGAGCTGACCGTC
AAATGGACCGATACTGAGGAGCAGGCGCTCAAGAAGGCCTGTGAGCGAGC
CAGAGAAGGCTGCGGGTTCATGTGTGTGAAGTAA back to topCoding sequence (CDS) from alignment at An15:801183..803366+ >CBS51388_009418-T1 ID=CBS51388_009418-T1|Name=CBS51388_009418-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2184bp|location=Sequence derived from alignment at An15:801183..803366+ (Aspergillus niger CBS 513.88)
ATGGGAGGAAACAAGCGCAAGCGCACAGAGGCTGGATGTTCAGATGACGA
AGATCCAGTAAGAAACAGCTCAGATGCGAATAGCTTTGGCGTTGCTCAAA
CGCTTTCGCTCCTAAACTCGGGCAAGACAAAGTCTCAGAACGATATCGAC
TCGGAAGAACCTGGGAAGGCGCAGGATGATATGCCGAAGGAAAGAGCTTC
GAAGAAGAAGCGCGTGGATGGGGAGAAGACAAAATACCCCGTCCTTACCT
ATGTTGAAGGAAAATTGCAATCATCCATCCGGATCTCCGATCTCCAGAGT
CTGCTACTCTACTGCTTTGCTGATGGCGTCGCGCCGCAGTGGATCTCAAT
CAAACACTCTGGTCATGTTAGGAAGATTGTCGTGCTGATGGTGCCTGGTC
TGGAACTGGGCATGTTCGATGGTTCACTTCCTTTGGATGCAGATTCTGTT
ACTGAGAAGGAGACGGAAGAACCTGCCGGTGCGGGCAAGGCAATGGAGGA
GGATACAAAAGCGGAAGAATTTGCTCGCTGGAAGCAAGGCTTGCCGCTGG
AGGACCGGTCACATCGGTTCAATCCTCGCCCTCTTTCGCGTGGTGACCTT
CCGGCTCCCCTACAACCGCTAGCGGACATGTTTCCTCACGCCTGGCCCGT
AAAAGCCCCCGGTGATTCCAAGTACAACAAGATCCACTCTCCACTTCAAG
CCATACTTCTATCTGCTCTACCGAAGGGCAAGGACAGTAACACGAAGGGA
GTAAAACCTCCCAAGGTGGACAAGAGTATCGCCTTCCAGCGTACACCAAT
CACCACTTTTATCAGTTCCCTGGAAGATCTCCGGGAGAATGACTATGTGC
TTCATCCGGCTCTGCTCGCCACAGAACAAGAGAAGTCGACTTTGTTGGAA
AACCGTAAGCGGGCCGGACATTCCAAGGAAGATGGATGGGTAGATACTCA
CGTCGAGAGCTTGGAGGCTGGTCAGGTACCAGACTCTGAAATCCAGCAAG
GCAGCATGACCGCAGGCCGGGATGTGCTAGCGTTGGATTGCGAGATGTGC
ATAACTGAAGGTGGCCAATCCGAGCTCACGCGCATTAGCATGGTCCGCTG
GGATGGTGAAGTCGTACTAGATGAGTTGGTGAAACCCCAGCGACCTATCA
TCGACTATTTGACTCGTTTCTCCGGTATCACGAAAGAATTACTCGATCCT
GTCACCACCACCCTTGCCGATGTCCAGCAGAAGCTTCTCTCCCTCCTTAC
TCCTCGTACCATTCTCGTCGGCCACTCTCTCAATTCCGATTTTAACGCCC
TGAAACTCACTCACCCGTTTATTGTCGACACCACATTTATTTACCCCCAT
CCCCGCGGGCCGCCGCTCAAGTGCAGTTTGAGATGGCTCACCCAGAAGTA
TCTCGGAAAAGAGATCCAGAAGGGCCAGACCGGCCATGACTCGATCGAAG
ATGCGCGCGCAGTGCTCGAACTTGTGAAGCAGAAGTGCGAAAAGGGTGAG
CGCTGGGGCACCAGTGAGGCATCGAACGAGAGTATTTTCAAGCGCCTCGC
ACGCTCCATGCGTTCGGGGAAATCGGCCACCAACGAAGGCCGCACCGGCG
CTGTTGTCGACTGGGGCAACCCCGAGCGCGGCTTTGGGTCGCAGGCGACT
GCGTCGATCGGGTGCAGCAACGACACCGATGTAGTAAATGGCATCTCGAA
GGTAGTCAACGGCGACGACAGCAACCCCTCCATTCCCGGAGGTGGTGTTG
ACTTCACATGGGCTAGGTTGCGTGAGCTTGAAGTTTATCGCGGCTGGTGC
AATCGGATGCCCGACCCCAACAACGCCAACGAGTCGACGACGCTCGTTCC
CCCTCCTGAAGAAACGACTCCGACATCCGCCGCCGTCTCCCCCACCAAAG
AAGCCACTCGCAACCTCGCCGACACCGTCTCTCGTACCGTCTCCAACATC
CACCAAATCTACCAATCCCTCCCACCTTGCACGTTATTCCTTGTCTACTC
TGGTACCGGAGATCCCCGCGAAGTCAGCCGCCTCCAAGCCATGCACAAGA
CCTTCCGCGAAGAATTTAACTCCCGCAAACCGTGGGATGAGCTGACCGTC
AAATGGACCGATACTGAGGAGCAGGCGCTCAAGAAGGCCTGTGAGCGAGC
CAGAGAAGGCTGCGGGTTCATGTGTGTGAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR034922 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR013520 |
| DBxref | PFAM:PF00929 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:801183..803366 + |
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