You are here

Home

CBS51388_009420-T1, CBS51388_009420-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009420-T1
Unique NameCBS51388_009420-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:807434..808667+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009420-T1 ID=CBS51388_009420-T1|Name=CBS51388_009420-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1234bp|location=Sequence derived from alignment at An15:807434..808667+ (Aspergillus niger CBS 513.88)
ATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGTGGCA
GGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGAGTATGACTCATAGC
AGAAGAATGCTGCCATCGTGACGTCCGCTTTTGCTGAGAATCATGTGTCG
TAAGGTGATACAATGACCAAGCCAACTCCGGCAATGCTCGAGGCTATCTG
CCAGACCACACTTCTTGACGATGTCTTCGGTGAAGACCCAGTGACAAATG
ATCTTGAAGCTTATGTGGCAGAGCGTACTCAACATGAAAGCGCTCTCTTG
GTCATGTCTGGCACAATGGGCAACCAGGTTGCCATCCGCACGCACCTGAA
GGAACCGCCTTATTCTGTCTTGTGCGATCATCGGTCTCATATCATCTGTT
ACGAGGCTGGTGGAGTAAGCTCCCTCACGGGCGCTACGGTCATGCCCGTC
ACCCCGAAGAATGGTGTTCACCTTACTTTGGAGGATATAAAGAAACATGC
GGTACTCAGCGATAACATCCACTACTGTCCTACGAAGCTCATCAGTCTTG
AGAACACGTTGGATGGGATGGTTATGCCACTTTCTGAGGCTCGGCGTATC
ACTGAATGGGCCCATCAAAACAACATCAAGGTCCATCTGGATGGTGCGAG
ACTTTGGGAAGCAGTGGTGTCCGGTGCCGGTAGTTTGCCTGACTACACTA
CTTTGTTCGATAGCGTAAGCCTATGTTTCTCGAAGGGCTTAGGTGCCCCC
ATTGGAAGTATTATTGTTGGCTCGAACGAGTTCATCAAGAAAGCTCGATG
GTTTCGCAAATCCATCGGTGGTGGTGTACGTCAAGCTGGAGTCATCTCTG
CGGCGGCCCGCGTCGCGGTTGAGGAGACATTTGGACCAGACCCCAATGGA
CAGCAAGGGAAGCTTCTAGGGTCTCATCAGAGAGCAAAGAAGGTTGCCGA
TATGTGGACTAGCCGTGGAGGCAAGCTATCTCACCCGGTACAGACCAACA
TGGTGTGGTTGGACGTCGAGGGGTCGGGCTTGGGGCCTGATGACCTGGCT
GAGATCGGACGTGAAAAGGGGTTGAAGCTTGGGGGTAGTCGCATTGTCGT
CCACTACCGTAAGTATCCCTTTCCCATGCGAACTACTCTCTCCTAATCAA
TCTAACATGACTGCAGAGGTATCCGAAGAGTCCCTCTCTCGACTCGAGCA
GGTGTTTGAGGCAGCTATGAACAAGAAAGCTTGA
back to top

Coding sequence (CDS) from alignment at An15:807434..808667+

>CBS51388_009420-T1 ID=CBS51388_009420-T1|Name=CBS51388_009420-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3312bp|location=Sequence derived from alignment at An15:807434..808667+ (Aspergillus niger CBS 513.88)
ATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGTGGCA
GGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAATGACCAAGC
CAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTCTTGACGAT
GTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTATGTGGCAGA
GCGTACTCAACATGAAAGCGCTCTCTTGGTCATGTCTGGCACAATGGGCA
ACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATTCTGTCTTG
TGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGAGTAAGCTC
CCTCACGGGCGCTACGGTCATGCCCGTCACCCCGAAGAATGGTGTTCACC
TTACTTTGGAGGATATAAAGAAACATGCGGTACTCAGCGATAACATCCAC
TACTGTCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGATGGGATGGT
TATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCATCAAAACA
ACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAGTGGTGTCC
GGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGCGTAAGCCT
ATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTATTGTTGGCT
CGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCATCGGTGGT
GGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTCGCGGTTGA
GGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCTTCTAGGGT
CTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCCGTGGAGGC
AAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGACGTCGAGGG
GTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGAAAAGGGGT
TGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTATCCGAAGAG
TCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAACAAGAAAGC
TTGAATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGT
GGCAGGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAATGACC
AAGCCAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTCTTGA
CGATGTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTATGTGG
CAGAGCGTACTCAACATGAAAGCGCTCTCTTGGTCATGTCTGGCACAATG
GGCAACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATTCTGT
CTTGTGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGAGTAA
GCTCCCTCACGGGCGCTACGGTCATGCCCGTCACCCCGAAGAATGGTGTT
CACCTTACTTTGGAGGATATAAAGAAACATGCGGTACTCAGCGATAACAT
CCACTACTGTCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGATGGGA
TGGTTATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCATCAA
AACAACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAGTGGT
GTCCGGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGCGTAA
GCCTATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTATTGTT
GGCTCGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCATCGG
TGGTGGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTCGCGG
TTGAGGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCTTCTA
GGGTCTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCCGTGG
AGGCAAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGACGTCG
AGGGGTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGAAAAG
GGGTTGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTATCCGA
AGAGTCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAACAAGA
AAGCTTGAATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGC
ACGTGGCAGGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAAT
GACCAAGCCAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTC
TTGACGATGTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTAT
GTGGCAGAGCGTACTCAACATGAAAGCGCTCTCTTGGTCATGTCTGGCAC
AATGGGCAACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATT
CTGTCTTGTGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGA
GTAAGCTCCCTCACGGGCGCTACGGTCATGCCCGTCACCCCGAAGAATGG
TGTTCACCTTACTTTGGAGGATATAAAGAAACATGCGGTACTCAGCGATA
ACATCCACTACTGTCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGAT
GGGATGGTTATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCA
TCAAAACAACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAG
TGGTGTCCGGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGC
GTAAGCCTATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTAT
TGTTGGCTCGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCA
TCGGTGGTGGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTC
GCGGTTGAGGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCT
TCTAGGGTCTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCC
GTGGAGGCAAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGAC
GTCGAGGGGTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGA
AAAGGGGTTGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTAT
CCGAAGAGTCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAAC
AAGAAAGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009420CBS51388_009420Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009420-T1.exon1CBS51388_009420-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009420-T1.exon2CBS51388_009420-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009420-T1.exon3CBS51388_009420-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009420-T1.cdsCBS51388_009420-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009420-T1CBS51388_009420-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR001597
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR023603
DBxrefPFAM:PF01212
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:807434..808667 +
Powered by Drupal