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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:825743..827224+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009427-T1 ID=CBS51388_009427-T1|Name=CBS51388_009427-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1482bp|location=Sequence derived from alignment at An15:825743..827224+ (Aspergillus niger CBS 513.88)
ATGTCGGACACACCCCGTCCATCGCTCAAGCTCACCTTCGGGAAAAAGAA
GGCGCCCGAGGAACCATCTCAGAGACAGCCTGCTGCACCTCCTCCGCCAA
CAGAGACCCCCCAACGCAAGCTCACGCTCAAGATCGCCCGTAGGCCGGCA
CCAGAAGCGCCTCCTGAGGATGACAAACTTAAGAAAAAGAAGAAGACTTC
GAAGAAGCGTCCAGCAGAGGGACCCGCGTTGCAGGAACCTTCCACCACGG
TCGCGACAACCCAACCCTCTGGGCCTAAACGCCTGAAATTAAACCCATCG
AAGAAGCCCGGGGTCCAGTCGCTTCGTATCAAGAACAAGGGGCTGGTCCC
CAACCGGCCGGTGGGCGTTGGCTACGACTCGGAGGCGTCCGACACGGAAA
TCGACCCCTCGATCGAGGAACAATTCATTCTGCGCATGTTGCCCGGGGAG
GATTGCGAATATCTGCAGCGCGCCATTTCTGAACGCCGGTTCGATCGCTC
GGAAATTTCTTTTAAGCCACTCACCCGTGAGGGACGACGCGCCATCTTCA
AGATCCGCGATCATCAATACGCCGCAGCGCTGGTCGACTTGCCATGTATC
ATCGAAGGTATGAAGAGTTGGGACCGGCGTGGGTGGTACAAATCTGCGGA
TATCTGCCAGATGCTTCTGGTCCTTGGCCCGGTTGCTAATGAACAAGAGG
CCATGGACTACCCGCTTCCCTCGGACATTTTACACCCAGATGACAAAACT
TTGCAATACCCACACGGTCTCACGCCGCCGTTGCGATGGGTCAGGAAGCG
GCGTTTCCGGGAACGGATCAGCACGCGGACTATCGAGCAGGTCGAGAAGG
CCGTCGAAGATCTGATTGCCCAGGATGAGGCTGCCGTGGCACCTATCCGC
TATGAGCTGGTTGATAAGACAGCATTGAACCGGGCTGAGGGACTGGTCCA
AAGTGGAGATTACGACTATGAAGATGAATACGATGATGAACAGGATGCCG
AGGGCGAGATGGAGGAAGGCATGGAAGATGGTGGTCTGTTTGACGATTTC
GAAGACACCCTCGCTGCCGAGATGGAGGCTGCCTTGGCTGCCGGCGACGA
AGGCGAGCCAGGCGCTGCGGCCGCGGCAACTGGAGCTGAGCCACCATCAG
ATGCTGGAGTATACCAAGCGGGTACGCCAATGGCAACGAAGCCGTCCACG
CCTGCGCCAGAATCGTCTGGTGATGAGAGTGACGGGTCCGACGATGGCGA
TGAACCGGAAGACGAGCTGGACGATGAGCAACTCGAGCAACAGCGGCAGA
TGCAGCAGCAACGCGAGGAAATTGCCGAACTGGAGGCACTGATCCGCGCC
GAGACCGCGAAGTGGGAGAAGATGCAGAACGCCATCCTGAAGGGCAAACT
GGCCAAGCGGATCCACGATCTGAAACAGGATCTATCATTGAAGAAGGTGT
CTATCGGCGAGGGCGATGATGCTGATGGTTAA back to topCoding sequence (CDS) from alignment at An15:825743..827224+ >CBS51388_009427-T1 ID=CBS51388_009427-T1|Name=CBS51388_009427-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1482bp|location=Sequence derived from alignment at An15:825743..827224+ (Aspergillus niger CBS 513.88)
ATGTCGGACACACCCCGTCCATCGCTCAAGCTCACCTTCGGGAAAAAGAA
GGCGCCCGAGGAACCATCTCAGAGACAGCCTGCTGCACCTCCTCCGCCAA
CAGAGACCCCCCAACGCAAGCTCACGCTCAAGATCGCCCGTAGGCCGGCA
CCAGAAGCGCCTCCTGAGGATGACAAACTTAAGAAAAAGAAGAAGACTTC
GAAGAAGCGTCCAGCAGAGGGACCCGCGTTGCAGGAACCTTCCACCACGG
TCGCGACAACCCAACCCTCTGGGCCTAAACGCCTGAAATTAAACCCATCG
AAGAAGCCCGGGGTCCAGTCGCTTCGTATCAAGAACAAGGGGCTGGTCCC
CAACCGGCCGGTGGGCGTTGGCTACGACTCGGAGGCGTCCGACACGGAAA
TCGACCCCTCGATCGAGGAACAATTCATTCTGCGCATGTTGCCCGGGGAG
GATTGCGAATATCTGCAGCGCGCCATTTCTGAACGCCGGTTCGATCGCTC
GGAAATTTCTTTTAAGCCACTCACCCGTGAGGGACGACGCGCCATCTTCA
AGATCCGCGATCATCAATACGCCGCAGCGCTGGTCGACTTGCCATGTATC
ATCGAAGGTATGAAGAGTTGGGACCGGCGTGGGTGGTACAAATCTGCGGA
TATCTGCCAGATGCTTCTGGTCCTTGGCCCGGTTGCTAATGAACAAGAGG
CCATGGACTACCCGCTTCCCTCGGACATTTTACACCCAGATGACAAAACT
TTGCAATACCCACACGGTCTCACGCCGCCGTTGCGATGGGTCAGGAAGCG
GCGTTTCCGGGAACGGATCAGCACGCGGACTATCGAGCAGGTCGAGAAGG
CCGTCGAAGATCTGATTGCCCAGGATGAGGCTGCCGTGGCACCTATCCGC
TATGAGCTGGTTGATAAGACAGCATTGAACCGGGCTGAGGGACTGGTCCA
AAGTGGAGATTACGACTATGAAGATGAATACGATGATGAACAGGATGCCG
AGGGCGAGATGGAGGAAGGCATGGAAGATGGTGGTCTGTTTGACGATTTC
GAAGACACCCTCGCTGCCGAGATGGAGGCTGCCTTGGCTGCCGGCGACGA
AGGCGAGCCAGGCGCTGCGGCCGCGGCAACTGGAGCTGAGCCACCATCAG
ATGCTGGAGTATACCAAGCGGGTACGCCAATGGCAACGAAGCCGTCCACG
CCTGCGCCAGAATCGTCTGGTGATGAGAGTGACGGGTCCGACGATGGCGA
TGAACCGGAAGACGAGCTGGACGATGAGCAACTCGAGCAACAGCGGCAGA
TGCAGCAGCAACGCGAGGAAATTGCCGAACTGGAGGCACTGATCCGCGCC
GAGACCGCGAAGTGGGAGAAGATGCAGAACGCCATCCTGAAGGGCAAACT
GGCCAAGCGGATCCACGATCTGAAACAGGATCTATCATTGAAGAAGGTGT
CTATCGGCGAGGGCGATGATGCTGATGGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005669 | transcription factor TFIID complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263U08 |
| DBxref | InterPro:IPR006751 |
| DBxref | PFAM:PF04658 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:825743..827224 + |
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