|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:847606..849290+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009433-T1 ID=CBS51388_009433-T1|Name=CBS51388_009433-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1685bp|location=Sequence derived from alignment at An15:847606..849290+ (Aspergillus niger CBS 513.88)
ATGGAGACCACTCTTGCTCATCGACCTTGGGAGCCCGCTACTACGGGACC
GCAAACCCCCCCAGTGTCGTCTACCCAAACCCTCCCATCTATTTCGACTT
TGACAGCAAGTATGGCCGGCGGCATGCCTACCCAGGCCGAAAAGTCACCG
GGGAATGCCTCCCTAAATACGATAGAGCGAGATTCGGGGAATTGGTCCAT
GCCTCAGAGTACCAGTAAGGCTTCGTCTTATTCATTCCTACCTGCGGAGG
CTGATTGTCCCCTAGGGTCGTCTACCTACTCAACCACGACAAACGCGACA
GGCAACTATCCCTCTCTCTCCTTCCTCACGTCCCAACCTTCTCCCAATCG
CGCATCCTACGTCTCGGATCGGTCCCCGTACCCCAACGACCACTCTAATA
CCAACACGCCTTCCTCTGCGGGAGCGCAGCCTTCGCCCAATTTCGGGTCA
ACCCAGCCGAACACAACCCTGCCTTCGATCAACCAGAATTACGATGCTCC
TTCTCAACGAGGCAGTATGGTGGAACACCCCGAGTCTCGACGGAGCAGTG
TGGATAGCAGGATGAACCAAGGAATCAGCTCGCTTGCCATTAACCCCGCA
TCTCCTTATCATAGCACGAATGCTTCGCAAACCTCGATTGTTTCGGGTCT
CCAACGAGAGCGCGGTATTTCTATGGACGTGAATATGAACAATTCCTATC
GCGGCCCTCGATACTCTGGAGGCCAACCACTCTCTCCACTTGGCCCGCGG
GCTAGTGAACATCGCGGATTTGCAGCTGGCCGCACGGCACCTGCCATCTC
GTCGAATCCTCGCTCTGAAATCTACAATGCAGAGGCACCCACCGCTGGTC
TTGCATACGCTTTCCCGGATCCTGACGTTGCGCGATCCAATTCTGTCTCT
TCTACCACCGAAAAGTCAACCAATCAATTCTCCCGCAAAGGAAGTACTGC
TGAGTCACTTGCCAGTAGCGTCTTCTCTGATGCACGGTTACCTCGTGGAC
AGCATGGTATGTCTTCTGAATCCCTTAAGATATACGAACTACGATTCCTG
ACCTTTTTCTAGAACTTCCTCAAAATGTGCACCATCATTCTTTACAACAC
AAGCAAGTCCGTGGTCTTATTGGAGAAGCAGACGCACATAGTGGTAGTAC
GCCTTACAGCAGAACTCCCGAGCTGAGGGTAACGCACAAGTTGGCGGAGC
GAAAGCGTCGCAGTGAGATGAAGGATTGCTTCGAAGCTTTGCGTGTCCGC
CTCCCACAAAGTCAGAACAATAAATCGAGTAAATGGGAGACACTCACAAG
AGGTATTTCATAACTATCGCAGGCACAGCCCTGGTGTTGACGTTGTTCTT
TTACTAACGTGCTTGTAGCTATCGAATATATCTCACATCTAGAAAAGATG
GTTACTACCACTCGCAGAGAAAATGACGTGCTGAGGAGCGAACTTGACGA
GATGCGGGCGCAACTCAGTCAGCAGCAAGCCAATGGCCAATCTCGGCAGC
CGTCGATCTTTGAGCATCATCCCGTAACGGTGCCACAGCCGAATGGGCAG
GTACATGGCGCTATGTTTTCCGGTTATGCTCCTGGATCCGCGATGCAGCA
AGAGCAACCGCGAACGCTTCCTCCGCTCATGAACGGGACTGTTGCTCCAA
TGCAAGGCGTGCAGTACACCGACGAACGACGGTAG back to topCoding sequence (CDS) from alignment at An15:847606..849290+ >CBS51388_009433-T1 ID=CBS51388_009433-T1|Name=CBS51388_009433-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4689bp|location=Sequence derived from alignment at An15:847606..849290+ (Aspergillus niger CBS 513.88)
ATGGAGACCACTCTTGCTCATCGACCTTGGGAGCCCGCTACTACGGGACC
GCAAACCCCCCCAGTGTCGTCTACCCAAACCCTCCCATCTATTTCGACTT
TGACAGCAAGTATGGCCGGCGGCATGCCTACCCAGGCCGAAAAGTCACCG
GGGAATGCCTCCCTAAATACGATAGAGCGAGATTCGGGGAATTGGTCCAT
GCCTCAGAGTACCAGTAAGGCTTCGTCTTATTCATTCCTACCTGCGGAGG
CTGATTGTCCCCTAGGGTCGTCTACCTACTCAACCACGACAAACGCGACA
GGCAACTATCCCTCTCTCTCCTTCCTCACGTCCCAACCTTCTCCCAATCG
CGCATCCTACGTCTCGGATCGGTCCCCGTACCCCAACGACCACTCTAATA
CCAACACGCCTTCCTCTGCGGGAGCGCAGCCTTCGCCCAATTTCGGGTCA
ACCCAGCCGAACACAACCCTGCCTTCGATCAACCAGAATTACGATGCTCC
TTCTCAACGAGGCAGTATGGTGGAACACCCCGAGTCTCGACGGAGCAGTG
TGGATAGCAGGATGAACCAAGGAATCAGCTCGCTTGCCATTAACCCCGCA
TCTCCTTATCATAGCACGAATGCTTCGCAAACCTCGATTGTTTCGGGTCT
CCAACGAGAGCGCGGTATTTCTATGGACGTGAATATGAACAATTCCTATC
GCGGCCCTCGATACTCTGGAGGCCAACCACTCTCTCCACTTGGCCCGCGG
GCTAGTGAACATCGCGGATTTGCAGCTGGCCGCACGGCACCTGCCATCTC
GTCGAATCCTCGCTCTGAAATCTACAATGCAGAGGCACCCACCGCTGGTC
TTGCATACGCTTTCCCGGATCCTGACGTTGCGCGATCCAATTCTGTCTCT
TCTACCACCGAAAAGTCAACCAATCAATTCTCCCGCAAAGGAAGTACTGC
TGAGTCACTTGCCAGTAGCGTCTTCTCTGATGCACGGTTACCTCGTGGAC
AGCATGAACTTCCTCAAAATGTGCACCATCATTCTTTACAACACAAGCAA
GTCCGTGGTCTTATTGGAGAAGCAGACGCACATAGTGGTAGTACGCCTTA
CAGCAGAACTCCCGAGCTGAGGGTAACGCACAAGTTGGCGGAGCGAAAGC
GTCGCAGTGAGATGAAGGATTGCTTCGAAGCTTTGCGTGTCCGCCTCCCA
CAAAGTCAGAACAATAAATCGAGTAAATGGGAGACACTCACAAGAGCTAT
CGAATATATCTCACATCTAGAAAAGATGGTTACTACCACTCGCAGAGAAA
ATGACGTGCTGAGGAGCGAACTTGACGAGATGCGGGCGCAACTCAGTCAG
CAGCAAGCCAATGGCCAATCTCGGCAGCCGTCGATCTTTGAGCATCATCC
CGTAACGGTGCCACAGCCGAATGGGCAGGTACATGGCGCTATGTTTTCCG
GTTATGCTCCTGGATCCGCGATGCAGCAAGAGCAACCGCGAACGCTTCCT
CCGCTCATGAACGGGACTGTTGCTCCAATGCAAGGCGTGCAGTACACCGA
CGAACGACGGTAGATGGAGACCACTCTTGCTCATCGACCTTGGGAGCCCG
CTACTACGGGACCGCAAACCCCCCCAGTGTCGTCTACCCAAACCCTCCCA
TCTATTTCGACTTTGACAGCAAGTATGGCCGGCGGCATGCCTACCCAGGC
CGAAAAGTCACCGGGGAATGCCTCCCTAAATACGATAGAGCGAGATTCGG
GGAATTGGTCCATGCCTCAGAGTACCAGTAAGGCTTCGTCTTATTCATTC
CTACCTGCGGAGGCTGATTGTCCCCTAGGGTCGTCTACCTACTCAACCAC
GACAAACGCGACAGGCAACTATCCCTCTCTCTCCTTCCTCACGTCCCAAC
CTTCTCCCAATCGCGCATCCTACGTCTCGGATCGGTCCCCGTACCCCAAC
GACCACTCTAATACCAACACGCCTTCCTCTGCGGGAGCGCAGCCTTCGCC
CAATTTCGGGTCAACCCAGCCGAACACAACCCTGCCTTCGATCAACCAGA
ATTACGATGCTCCTTCTCAACGAGGCAGTATGGTGGAACACCCCGAGTCT
CGACGGAGCAGTGTGGATAGCAGGATGAACCAAGGAATCAGCTCGCTTGC
CATTAACCCCGCATCTCCTTATCATAGCACGAATGCTTCGCAAACCTCGA
TTGTTTCGGGTCTCCAACGAGAGCGCGGTATTTCTATGGACGTGAATATG
AACAATTCCTATCGCGGCCCTCGATACTCTGGAGGCCAACCACTCTCTCC
ACTTGGCCCGCGGGCTAGTGAACATCGCGGATTTGCAGCTGGCCGCACGG
CACCTGCCATCTCGTCGAATCCTCGCTCTGAAATCTACAATGCAGAGGCA
CCCACCGCTGGTCTTGCATACGCTTTCCCGGATCCTGACGTTGCGCGATC
CAATTCTGTCTCTTCTACCACCGAAAAGTCAACCAATCAATTCTCCCGCA
AAGGAAGTACTGCTGAGTCACTTGCCAGTAGCGTCTTCTCTGATGCACGG
TTACCTCGTGGACAGCATGAACTTCCTCAAAATGTGCACCATCATTCTTT
ACAACACAAGCAAGTCCGTGGTCTTATTGGAGAAGCAGACGCACATAGTG
GTAGTACGCCTTACAGCAGAACTCCCGAGCTGAGGGTAACGCACAAGTTG
GCGGAGCGAAAGCGTCGCAGTGAGATGAAGGATTGCTTCGAAGCTTTGCG
TGTCCGCCTCCCACAAAGTCAGAACAATAAATCGAGTAAATGGGAGACAC
TCACAAGAGCTATCGAATATATCTCACATCTAGAAAAGATGGTTACTACC
ACTCGCAGAGAAAATGACGTGCTGAGGAGCGAACTTGACGAGATGCGGGC
GCAACTCAGTCAGCAGCAAGCCAATGGCCAATCTCGGCAGCCGTCGATCT
TTGAGCATCATCCCGTAACGGTGCCACAGCCGAATGGGCAGGTACATGGC
GCTATGTTTTCCGGTTATGCTCCTGGATCCGCGATGCAGCAAGAGCAACC
GCGAACGCTTCCTCCGCTCATGAACGGGACTGTTGCTCCAATGCAAGGCG
TGCAGTACACCGACGAACGACGGTAGATGGAGACCACTCTTGCTCATCGA
CCTTGGGAGCCCGCTACTACGGGACCGCAAACCCCCCCAGTGTCGTCTAC
CCAAACCCTCCCATCTATTTCGACTTTGACAGCAAGTATGGCCGGCGGCA
TGCCTACCCAGGCCGAAAAGTCACCGGGGAATGCCTCCCTAAATACGATA
GAGCGAGATTCGGGGAATTGGTCCATGCCTCAGAGTACCAGTAAGGCTTC
GTCTTATTCATTCCTACCTGCGGAGGCTGATTGTCCCCTAGGGTCGTCTA
CCTACTCAACCACGACAAACGCGACAGGCAACTATCCCTCTCTCTCCTTC
CTCACGTCCCAACCTTCTCCCAATCGCGCATCCTACGTCTCGGATCGGTC
CCCGTACCCCAACGACCACTCTAATACCAACACGCCTTCCTCTGCGGGAG
CGCAGCCTTCGCCCAATTTCGGGTCAACCCAGCCGAACACAACCCTGCCT
TCGATCAACCAGAATTACGATGCTCCTTCTCAACGAGGCAGTATGGTGGA
ACACCCCGAGTCTCGACGGAGCAGTGTGGATAGCAGGATGAACCAAGGAA
TCAGCTCGCTTGCCATTAACCCCGCATCTCCTTATCATAGCACGAATGCT
TCGCAAACCTCGATTGTTTCGGGTCTCCAACGAGAGCGCGGTATTTCTAT
GGACGTGAATATGAACAATTCCTATCGCGGCCCTCGATACTCTGGAGGCC
AACCACTCTCTCCACTTGGCCCGCGGGCTAGTGAACATCGCGGATTTGCA
GCTGGCCGCACGGCACCTGCCATCTCGTCGAATCCTCGCTCTGAAATCTA
CAATGCAGAGGCACCCACCGCTGGTCTTGCATACGCTTTCCCGGATCCTG
ACGTTGCGCGATCCAATTCTGTCTCTTCTACCACCGAAAAGTCAACCAAT
CAATTCTCCCGCAAAGGAAGTACTGCTGAGTCACTTGCCAGTAGCGTCTT
CTCTGATGCACGGTTACCTCGTGGACAGCATGAACTTCCTCAAAATGTGC
ACCATCATTCTTTACAACACAAGCAAGTCCGTGGTCTTATTGGAGAAGCA
GACGCACATAGTGGTAGTACGCCTTACAGCAGAACTCCCGAGCTGAGGGT
AACGCACAAGTTGGCGGAGCGAAAGCGTCGCAGTGAGATGAAGGATTGCT
TCGAAGCTTTGCGTGTCCGCCTCCCACAAAGTCAGAACAATAAATCGAGT
AAATGGGAGACACTCACAAGAGCTATCGAATATATCTCACATCTAGAAAA
GATGGTTACTACCACTCGCAGAGAAAATGACGTGCTGAGGAGCGAACTTG
ACGAGATGCGGGCGCAACTCAGTCAGCAGCAAGCCAATGGCCAATCTCGG
CAGCCGTCGATCTTTGAGCATCATCCCGTAACGGTGCCACAGCCGAATGG
GCAGGTACATGGCGCTATGTTTTCCGGTTATGCTCCTGGATCCGCGATGC
AGCAAGAGCAACCGCGAACGCTTCCTCCGCTCATGAACGGGACTGTTGCT
CCAATGCAAGGCGTGCAGTACACCGACGAACGACGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036638 |
| DBxref | InterPro:IPR011598 |
| DBxref | PFAM:PF00010 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:847606..849290 + |
|
