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CBS51388_009438-T1, CBS51388_009438-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009438-T1
Unique NameCBS51388_009438-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:863166..864206-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009438-T1 ID=CBS51388_009438-T1|Name=CBS51388_009438-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1041bp|location=Sequence derived from alignment at An15:863166..864206- (Aspergillus niger CBS 513.88)
ATGTGGACCCATCTACCATCCCTCTGTGCCCTAGGCCTCACGCTAATCAC
ATCTGTGATAACCTCACCCATTGAAATCCGAGCCACCGGACCCTGGCTAG
CCCTTGACACGGACTTCCCAGACCCCGGCTTCGTCCAAGCCGACGACGGC
ACCTGGTACGCCTTCGGGACGAACGGCAACAACCGCACGGTGCAAGTAGC
CAAGTCCGCAGACTTCAAAACATGGACCCTCCTCGACAAAGAAGCCCTCC
CCACTTTAGCAGGCTGGGAGACCCAAATTGACCACTGGGCCCCAGACGTA
GTCCGCCGTGTACATTCCCCATCCCATCCCATCCCCTTCCCCCAAATCCA
AACTAACCACCACCACCACCCCCAGAACGACGGCAAATACGTCCTCTACT
ACAGCGGCGAAGCACAACAAATGCTCCGCCACCACTGCATCGGCACCGCA
GTCTCAGAATCCACCGATCCCAGCGGGCCCTACATCCCAAACCCAACCCC
CCTCTCCTGCCGTCTCGACCAAGGCGGCAGCATCGACGCGTCCGGCTTCC
TAGACAAAGACGGCTCACGCTACGTCGTGTTCAAAGTGGACGGCAACAGC
ATCGGCAACGGCGGGGACTGCAACAACGGCATTGCGCCATTGAAACCCAC
CCCGATTCTTCTCCAAAAAGTAGATACGGACGGGTTTACCCCCGTCGGCG
ACGCGGTGCAGATCCTGGACCGCGATGATAGCGACGGGCCGTTGGTGGAG
GCCCCGAATTTGATTCTGCATGGGGACACGTACTTTTTGTTTTACTCGAC
GCATTGCTATACGGATGAGAAGTATGATGTGCGGTGGGCGACGGCGAGTG
AGATTACGGGTCCGTATACGAAGACGGGGAGGCAGTTGGTGAAATCTGGG
GATTATGGGCTTGTTTCGCCGGGGGGTGGGACGGTTTGTGGGTGTGGGGA
TCGCATGCTGTTTCATGGGTTTTGTGGTGATAATAGGTGTATGTACGCGG
CTGAGGTGAGGATTGCGGGGACGGAGGTGGAGTTTGTTTAG
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Coding sequence (CDS) from alignment at An15:863166..864206-

>CBS51388_009438-T1 ID=CBS51388_009438-T1|Name=CBS51388_009438-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1950bp|location=Sequence derived from alignment at An15:863166..864206- (Aspergillus niger CBS 513.88)
AACGACGGCAAATACGTCCTCTACTACAGCGGCGAAGCACAACAAATGCT
CCGCCACCACTGCATCGGCACCGCAGTCTCAGAATCCACCGATCCCAGCG
GGCCCTACATCCCAAACCCAACCCCCCTCTCCTGCCGTCTCGACCAAGGC
GGCAGCATCGACGCGTCCGGCTTCCTAGACAAAGACGGCTCACGCTACGT
CGTGTTCAAAGTGGACGGCAACAGCATCGGCAACGGCGGGGACTGCAACA
ACGGCATTGCGCCATTGAAACCCACCCCGATTCTTCTCCAAAAAGTAGAT
ACGGACGGGTTTACCCCCGTCGGCGACGCGGTGCAGATCCTGGACCGCGA
TGATAGCGACGGGCCGTTGGTGGAGGCCCCGAATTTGATTCTGCATGGGG
ACACGTACTTTTTGTTTTACTCGACGCATTGCTATACGGATGAGAAGTAT
GATGTGCGGTGGGCGACGGCGAGTGAGATTACGGGTCCGTATACGAAGAC
GGGGAGGCAGTTGGTGAAATCTGGGGATTATGGGCTTGTTTCGCCGGGGG
GTGGGACGGTTTGTGGGTGTGGGGATCGCATGCTGTTTCATGGGTTTTGT
GGTGATAATAGGTGTATGTACGCGGCTGAGGTGAGGATTGCGGGGACGGA
GGTGGAGTTTGTTTAGATGTGGACCCATCTACCATCCCTCTGTGCCCTAG
GCCTCACGCTAATCACATCTGTGATAACCTCACCCATTGAAATCCGAGCC
ACCGGACCCTGGCTAGCCCTTGACACGGACTTCCCAGACCCCGGCTTCGT
CCAAGCCGACGACGGCACCTGGTACGCCTTCGGGACGAACGGCAACAACC
GCACGGTGCAAGTAGCCAAGTCCGCAGACTTCAAAACATGGACCCTCCTC
GACAAAGAAGCCCTCCCCACTTTAGCAGGCTGGGAGACCCAAATTGACCA
CTGGGCCCCAGACGTAGTCCGCCGTAACGACGGCAAATACGTCCTCTACT
ACAGCGGCGAAGCACAACAAATGCTCCGCCACCACTGCATCGGCACCGCA
GTCTCAGAATCCACCGATCCCAGCGGGCCCTACATCCCAAACCCAACCCC
CCTCTCCTGCCGTCTCGACCAAGGCGGCAGCATCGACGCGTCCGGCTTCC
TAGACAAAGACGGCTCACGCTACGTCGTGTTCAAAGTGGACGGCAACAGC
ATCGGCAACGGCGGGGACTGCAACAACGGCATTGCGCCATTGAAACCCAC
CCCGATTCTTCTCCAAAAAGTAGATACGGACGGGTTTACCCCCGTCGGCG
ACGCGGTGCAGATCCTGGACCGCGATGATAGCGACGGGCCGTTGGTGGAG
GCCCCGAATTTGATTCTGCATGGGGACACGTACTTTTTGTTTTACTCGAC
GCATTGCTATACGGATGAGAAGTATGATGTGCGGTGGGCGACGGCGAGTG
AGATTACGGGTCCGTATACGAAGACGGGGAGGCAGTTGGTGAAATCTGGG
GATTATGGGCTTGTTTCGCCGGGGGGTGGGACGGTTTGTGGGTGTGGGGA
TCGCATGCTGTTTCATGGGTTTTGTGGTGATAATAGGTGTATGTACGCGG
CTGAGGTGAGGATTGCGGGGACGGAGGTGGAGTTTGTTTAGATGTGGACC
CATCTACCATCCCTCTGTGCCCTAGGCCTCACGCTAATCACATCTGTGAT
AACCTCACCCATTGAAATCCGAGCCACCGGACCCTGGCTAGCCCTTGACA
CGGACTTCCCAGACCCCGGCTTCGTCCAAGCCGACGACGGCACCTGGTAC
GCCTTCGGGACGAACGGCAACAACCGCACGGTGCAAGTAGCCAAGTCCGC
AGACTTCAAAACATGGACCCTCCTCGACAAAGAAGCCCTCCCCACTTTAG
CAGGCTGGGAGACCCAAATTGACCACTGGGCCCCAGACGTAGTCCGCCGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009438CBS51388_009438Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009438-T1CBS51388_009438-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009438-T1.cdsCBS51388_009438-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009438-T1.exon2CBS51388_009438-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009438-T1.exon1CBS51388_009438-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH43_34
NoteCAZy:GH43_4
NoteCAZy:GH43_5
NoteCAZy:GH43_31
NoteCAZy:GH43_8
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_30
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR006710
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:863166..864206 -
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