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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:910042..911867- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009451-T1 ID=CBS51388_009451-T1|Name=CBS51388_009451-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1826bp|location=Sequence derived from alignment at An15:910042..911867- (Aspergillus niger CBS 513.88)
ATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCTCTGCCGGCCGAAGA
CACCTGGGGCCCCGCTACCGCCAGCGACAACATGCTGCAGGGCGTCCCCT
ACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTATGGCTGACTGGACT
GCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAGGCCTACAACCGCAA
CTACAGAGGTATACCTTTATCCTAAATATATCCTAGCCAAGCCAAGACCA
AGCAACTAACTGTTTCCCTCCAGACCAGCAAGTCTACGGTGCCGGTTCCT
CCAGCCTCTTCGCCGTCCAGGTCGCCGAAGACGAATCTTCCTTCTCCGTT
GTCGACAACACCCGCAGCTCCGCTAAGCGTACCTTCGGCCGTGGCGGTGG
TACCGTCTTCCGTGGCCGCGCCCAGCGCGGTGGTGCCCAGCGCGGTGGTC
GTGCCGGCTTCCAGCGCGTGGGCGCTGGCCGTGGCCAGGGTGGTGACCGC
TACTACGACAACCGTTCTGGTGGCCGCGGCAACCGTGGCCGTCGCTTCGG
CTGGAAGGACTACGACAAGCCCCAGCGCACCCGTGAGCCTTCGGTCAACG
TCCGCCCCGACTGGAACATGCTGGAGGAGGTTGACTTCAGCCGTCTGTCC
AAGCTGAACCTCGAGGCCCCCGAGGGTGAGGACGTCGACTCGTATGGTTT
CCTCTACCACTACGACCGGTCCTACGACAAGGCGCCCGTCAAGAACGCCG
AGCGCCGTCTCCAGTCCCTCGACCGTGCCGCCTACAACGTCACCACCACC
CAGGACCCCGTCATCCAGGAACTGGCCGAGAAGAACGAGGCCACCATCTT
CGCCACCTCGGACATCCTGTCCATGCTCATGTGCGCCCCCCGCAGTGTCT
ACTCCTGGGATATCGTCATCGTCCACCAGGGCAACAAGATCTACTTCGAC
AAGCGCGAAGGCGCCTCCCTGGACCTGGTCACCGTTAACGAGAACGCCGC
CGACGCTCCCCTCGAGCTGGCCGACTCCGCCAACAAGCAGGATGCCATCA
ACACCCCCAGCGCCCTGGCCATGGAAGCAACCTTCATCAACCACAACTTC
GCCCTGCAGACCGTTGTCGAGTCCGAGGACAGCAAGGTCTCCCTGGCCCA
CCCTAACCCCTTCTACAACGCCGCCGAGGAGACCGAGCCCCTCGCCTCCA
AGGCCTACAAGTACCGTCGCTTCGATCTCTCCCTGGAGCGCGACGACGAG
CCCGTCAACATGATCGTTCGTACCGAAGTCGACGCCATCATGAAGAACCC
CGTCAACGGCGAGGACCAGCAGCTGCTCGTCAAGGCCCTCAACGAGTTCG
ACAGCAAGGCCCAGGGCTCCGGCGGTGCCCTCGACTGGCGCAGCAAGCTC
TGGTCCCAGCGCGGTGCCGTTGTTGCTACTGAGATGAAGAACAACAGCGT
CAAGCTCGCCCGCTGGACCACCCAGGCCATCCTCGCCAAGGCTGACGGCA
TGAAGCTGGGTTTCGTCTCTCGTGCTAACCCCCGCTCGGCCGCTGGTCAC
GTCGTCCTCGGTGTTGTCGGCTACAAGCCCCGTGATCTGGCTGCCCAGAT
GAACCTGAACCTCGGCAACGGTTGGGGTATCGTGCGTACTATCGTCGACC
GCATCCGTGCCCTCGATGCCGATGAGGATGAGGACAAGGTCACCAAGTAC
GTCCTTATCAAGGACCCCAACCGTCCTGTGCTGCGTCTGTACAGCGTCCC
TGCTACTACCTTTGAGGAGGAAGAGGAGGTCGCTGCTGAGGAGCAGGAGG
CTGCTGAGGAGGAGGCTGAGGAGTAA back to topCoding sequence (CDS) from alignment at An15:910042..911867- >CBS51388_009451-T1 ID=CBS51388_009451-T1|Name=CBS51388_009451-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3522bp|location=Sequence derived from alignment at An15:910042..911867- (Aspergillus niger CBS 513.88)
ACCAGCAAGTCTACGGTGCCGGTTCCTCCAGCCTCTTCGCCGTCCAGGTC
GCCGAAGACGAATCTTCCTTCTCCGTTGTCGACAACACCCGCAGCTCCGC
TAAGCGTACCTTCGGCCGTGGCGGTGGTACCGTCTTCCGTGGCCGCGCCC
AGCGCGGTGGTGCCCAGCGCGGTGGTCGTGCCGGCTTCCAGCGCGTGGGC
GCTGGCCGTGGCCAGGGTGGTGACCGCTACTACGACAACCGTTCTGGTGG
CCGCGGCAACCGTGGCCGTCGCTTCGGCTGGAAGGACTACGACAAGCCCC
AGCGCACCCGTGAGCCTTCGGTCAACGTCCGCCCCGACTGGAACATGCTG
GAGGAGGTTGACTTCAGCCGTCTGTCCAAGCTGAACCTCGAGGCCCCCGA
GGGTGAGGACGTCGACTCGTATGGTTTCCTCTACCACTACGACCGGTCCT
ACGACAAGGCGCCCGTCAAGAACGCCGAGCGCCGTCTCCAGTCCCTCGAC
CGTGCCGCCTACAACGTCACCACCACCCAGGACCCCGTCATCCAGGAACT
GGCCGAGAAGAACGAGGCCACCATCTTCGCCACCTCGGACATCCTGTCCA
TGCTCATGTGCGCCCCCCGCAGTGTCTACTCCTGGGATATCGTCATCGTC
CACCAGGGCAACAAGATCTACTTCGACAAGCGCGAAGGCGCCTCCCTGGA
CCTGGTCACCGTTAACGAGAACGCCGCCGACGCTCCCCTCGAGCTGGCCG
ACTCCGCCAACAAGCAGGATGCCATCAACACCCCCAGCGCCCTGGCCATG
GAAGCAACCTTCATCAACCACAACTTCGCCCTGCAGACCGTTGTCGAGTC
CGAGGACAGCAAGGTCTCCCTGGCCCACCCTAACCCCTTCTACAACGCCG
CCGAGGAGACCGAGCCCCTCGCCTCCAAGGCCTACAAGTACCGTCGCTTC
GATCTCTCCCTGGAGCGCGACGACGAGCCCGTCAACATGATCGTTCGTAC
CGAAGTCGACGCCATCATGAAGAACCCCGTCAACGGCGAGGACCAGCAGC
TGCTCGTCAAGGCCCTCAACGAGTTCGACAGCAAGGCCCAGGGCTCCGGC
GGTGCCCTCGACTGGCGCAGCAAGCTCTGGTCCCAGCGCGGTGCCGTTGT
TGCTACTGAGATGAAGAACAACAGCGTCAAGCTCGCCCGCTGGACCACCC
AGGCCATCCTCGCCAAGGCTGACGGCATGAAGCTGGGTTTCGTCTCTCGT
GCTAACCCCCGCTCGGCCGCTGGTCACGTCGTCCTCGGTGTTGTCGGCTA
CAAGCCCCGTGATCTGGCTGCCCAGATGAACCTGAACCTCGGCAACGGTT
GGGGTATCGTGCGTACTATCGTCGACCGCATCCGTGCCCTCGATGCCGAT
GAGGATGAGGACAAGGTCACCAAGTACGTCCTTATCAAGGACCCCAACCG
TCCTGTGCTGCGTCTGTACAGCGTCCCTGCTACTACCTTTGAGGAGGAAG
AGGAGGTCGCTGCTGAGGAGCAGGAGGCTGCTGAGGAGGAGGCTGAGGAG
TAAATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCTCTGCCGGCCGA
AGACACCTGGGGCCCCGCTACCGCCAGCGACAACATGCTGCAGGGCGTCC
CCTACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTATGGCTGACTGG
ACTGCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAGGCCTACAACCG
CAACTACAGAGACCAGCAAGTCTACGGTGCCGGTTCCTCCAGCCTCTTCG
CCGTCCAGGTCGCCGAAGACGAATCTTCCTTCTCCGTTGTCGACAACACC
CGCAGCTCCGCTAAGCGTACCTTCGGCCGTGGCGGTGGTACCGTCTTCCG
TGGCCGCGCCCAGCGCGGTGGTGCCCAGCGCGGTGGTCGTGCCGGCTTCC
AGCGCGTGGGCGCTGGCCGTGGCCAGGGTGGTGACCGCTACTACGACAAC
CGTTCTGGTGGCCGCGGCAACCGTGGCCGTCGCTTCGGCTGGAAGGACTA
CGACAAGCCCCAGCGCACCCGTGAGCCTTCGGTCAACGTCCGCCCCGACT
GGAACATGCTGGAGGAGGTTGACTTCAGCCGTCTGTCCAAGCTGAACCTC
GAGGCCCCCGAGGGTGAGGACGTCGACTCGTATGGTTTCCTCTACCACTA
CGACCGGTCCTACGACAAGGCGCCCGTCAAGAACGCCGAGCGCCGTCTCC
AGTCCCTCGACCGTGCCGCCTACAACGTCACCACCACCCAGGACCCCGTC
ATCCAGGAACTGGCCGAGAAGAACGAGGCCACCATCTTCGCCACCTCGGA
CATCCTGTCCATGCTCATGTGCGCCCCCCGCAGTGTCTACTCCTGGGATA
TCGTCATCGTCCACCAGGGCAACAAGATCTACTTCGACAAGCGCGAAGGC
GCCTCCCTGGACCTGGTCACCGTTAACGAGAACGCCGCCGACGCTCCCCT
CGAGCTGGCCGACTCCGCCAACAAGCAGGATGCCATCAACACCCCCAGCG
CCCTGGCCATGGAAGCAACCTTCATCAACCACAACTTCGCCCTGCAGACC
GTTGTCGAGTCCGAGGACAGCAAGGTCTCCCTGGCCCACCCTAACCCCTT
CTACAACGCCGCCGAGGAGACCGAGCCCCTCGCCTCCAAGGCCTACAAGT
ACCGTCGCTTCGATCTCTCCCTGGAGCGCGACGACGAGCCCGTCAACATG
ATCGTTCGTACCGAAGTCGACGCCATCATGAAGAACCCCGTCAACGGCGA
GGACCAGCAGCTGCTCGTCAAGGCCCTCAACGAGTTCGACAGCAAGGCCC
AGGGCTCCGGCGGTGCCCTCGACTGGCGCAGCAAGCTCTGGTCCCAGCGC
GGTGCCGTTGTTGCTACTGAGATGAAGAACAACAGCGTCAAGCTCGCCCG
CTGGACCACCCAGGCCATCCTCGCCAAGGCTGACGGCATGAAGCTGGGTT
TCGTCTCTCGTGCTAACCCCCGCTCGGCCGCTGGTCACGTCGTCCTCGGT
GTTGTCGGCTACAAGCCCCGTGATCTGGCTGCCCAGATGAACCTGAACCT
CGGCAACGGTTGGGGTATCGTGCGTACTATCGTCGACCGCATCCGTGCCC
TCGATGCCGATGAGGATGAGGACAAGGTCACCAAGTACGTCCTTATCAAG
GACCCCAACCGTCCTGTGCTGCGTCTGTACAGCGTCCCTGCTACTACCTT
TGAGGAGGAAGAGGAGGTCGCTGCTGAGGAGCAGGAGGCTGCTGAGGAGG
AGGCTGAGGAGTAAATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCT
CTGCCGGCCGAAGACACCTGGGGCCCCGCTACCGCCAGCGACAACATGCT
GCAGGGCGTCCCCTACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTA
TGGCTGACTGGACTGCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAG
GCCTACAACCGCAACTACAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007783 |
| DBxref | PFAM:PF05091 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:910042..911867 - |
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