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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:913445..913947+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009452-T1 ID=CBS51388_009452-T1|Name=CBS51388_009452-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=503bp|location=Sequence derived from alignment at An15:913445..913947+ (Aspergillus niger CBS 513.88)
ATGCAGTTCACCACCGCTCTCTCCATCCTGGCCATTGCCACCACCGCCGT
TGCTTCGGCCATCCCCGCCGCTCAGGACAGCACTGCGTCTCTTGAGGATC
AGGTGAAGCAAGTGGCCGCTCAGCGAGGCACCTCTGATGGCACCATCAGT
ACCGTCACGGAGGCGCAATGCATCCCTCCCATCTTGTGCTGTGGCTCCCT
CACTACTCCTCTTGACCCTCTTGTCGACCCTATTCTTCTGGACCTGGGCA
TTGATGCTTCCAACATTGTTGGCTCCATCGGTCTTCTTTGTATGTTGCCA
GATTCTTTACTTCCTCAAGACTGGATAATGGGTTACTAACGAGAAATACA
GGCAAGGACTACGACGACAGCTGCACATCAGCTCCTCAGTGCTGCACTGA
GATCAACCTCTTGGTAAGTTTCTTCCTACGAAGATATGATGTCAGGCTAA
CGCCAGTGTAGAACGGTCTTGTGGCTCTCGGATGCTCTTCCCTGGAGCAG
TAA back to topCoding sequence (CDS) from alignment at An15:913445..913947+ >CBS51388_009452-T1 ID=CBS51388_009452-T1|Name=CBS51388_009452-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1179bp|location=Sequence derived from alignment at An15:913445..913947+ (Aspergillus niger CBS 513.88)
ATGCAGTTCACCACCGCTCTCTCCATCCTGGCCATTGCCACCACCGCCGT
TGCTTCGGCCATCCCCGCCGCTCAGGACAGCACTGCGTCTCTTGAGGATC
AGGTGAAGCAAGTGGCCGCTCAGCGAGGCACCTCTGATGGCACCATCAGT
ACCGTCACGGAGGCGCAATGCATCCCTCCCATCTTGTGCTGTGGCTCCCT
CACTACTCCTCTTGACCCTCTTGTCGACCCTATTCTTCTGGACCTGGGCA
TTGATGCTTCCAACATTGTTGGCTCCATCGGTCTTCTTTGCAAGGACTAC
GACGACAGCTGCACATCAGCTCCTCAGTGCTGCACTGAGATCAACCTCTT
GAACGGTCTTGTGGCTCTCGGATGCTCTTCCCTGGAGCAGTAAATGCAGT
TCACCACCGCTCTCTCCATCCTGGCCATTGCCACCACCGCCGTTGCTTCG
GCCATCCCCGCCGCTCAGGACAGCACTGCGTCTCTTGAGGATCAGGTGAA
GCAAGTGGCCGCTCAGCGAGGCACCTCTGATGGCACCATCAGTACCGTCA
CGGAGGCGCAATGCATCCCTCCCATCTTGTGCTGTGGCTCCCTCACTACT
CCTCTTGACCCTCTTGTCGACCCTATTCTTCTGGACCTGGGCATTGATGC
TTCCAACATTGTTGGCTCCATCGGTCTTCTTTGCAAGGACTACGACGACA
GCTGCACATCAGCTCCTCAGTGCTGCACTGAGATCAACCTCTTGAACGGT
CTTGTGGCTCTCGGATGCTCTTCCCTGGAGCAGTAAATGCAGTTCACCAC
CGCTCTCTCCATCCTGGCCATTGCCACCACCGCCGTTGCTTCGGCCATCC
CCGCCGCTCAGGACAGCACTGCGTCTCTTGAGGATCAGGTGAAGCAAGTG
GCCGCTCAGCGAGGCACCTCTGATGGCACCATCAGTACCGTCACGGAGGC
GCAATGCATCCCTCCCATCTTGTGCTGTGGCTCCCTCACTACTCCTCTTG
ACCCTCTTGTCGACCCTATTCTTCTGGACCTGGGCATTGATGCTTCCAAC
ATTGTTGGCTCCATCGGTCTTCTTTGCAAGGACTACGACGACAGCTGCAC
ATCAGCTCCTCAGTGCTGCACTGAGATCAACCTCTTGAACGGTCTTGTGG
CTCTCGGATGCTCTTCCCTGGAGCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0009277 | fungal-type cell wall |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005199 | structural constituent of cell wall |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR001338 |
| DBxref | PFAM:PF01185 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:913445..913947 + |
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