|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:936381..938135+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009463-T1 ID=CBS51388_009463-T1|Name=CBS51388_009463-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1755bp|location=Sequence derived from alignment at An15:936381..938135+ (Aspergillus niger CBS 513.88)
ATGGGTTTCTTGTTGAAGAGACCGGATGATGCGGTGGGCTCAGCGGCCCC
CGCCATCATGATCGGTCTGTTTGTCTCCTTTGGAGGTATCCTCTTCGGGT
ATGTACTTCTTTTCCTCAGCCATGATGCGTTGGATATGGGGTCTGACCAG
GATCTAAATAGATATGACACCGGAACCATCAGTGGTATCCTGGCCATGAA
GTTCTGGCGGAAGATGTTCTCTACCGGATACATCAACCCCGCCGATGACT
ACCCCGATGTAACCTCATCTCAGTCTTCCATGATTGTGTCATTGCTCTCT
GCCGGTACTTTCTTTGGAGCCCTGGCCTCTGCTCCTGTTGCGGATTACTT
TGGTCGCCGCATTGCCATGATCATCGAATCATTTGTCTTCTGCTTCGGTG
TGATCCTCCAAACCGCCGCCACCTCGATCCCGCTGTTCGTCGCTGGGCGG
TTCTTTGCTGGCTTTGGTGTTGGTCTACTCTCTGCAACTAGTAAGTCGAC
AAGAGGTCCCCATTTCACCTAAGACACGTGCTAACTGGGACACAGTCCCT
CTCTACCAGTCTGAGACTGCCCCGAAGTGGATTCGTGGTACCATTGTCGG
CGCCTATCAGCTGGCCATTACTATTGGTCTGCTGCTGGCTTCTGTTGTCA
ACAATGCTACCAAGGACCGCATGGACACTGGCTGCTACCGCATTCCGGTT
GCCGTCCAGTTCGCATGGGCCATCATCCTCGTTGTCGGAATGAGTGTGCT
CCCCGAAACGCCACGCTTCCTGATCAAGAAGGATAGACACGAGGCTGCGG
CTAAGGCGCTTGCCCGTCTTCGTCGGATGAATGTTGACGACCAGGCCGTC
GTGGATGAGTTGGTGGAAATCCGCGCCTCCCACGAGTACGAGATGAGCGT
GGGCAAGGCGAGCTTCCGCGAAATTGTGACTGGCTCCTTGGGTAAGCGGT
TGGCCACCGGATGTGCTGTGCAGGCGCTGCAACAACTCGCTGGAGTCAAC
TTCATCTGTAAGTGTGCTTCTTTTACTTCTTGACAAAGGCCCCCGACTAA
CCGCTTTCAGTTTACTACGGAACGACCTTTTTCCAACGCTCCGGCATCCA
GAACAGCTTTACCATCACGCTCATTACCAACATTGTCAACGTGGTCTCCA
CGTTCCCGGGTCTGTACATGGTTGAGAAATGGGGTCGCCGGCCCTTGCTG
CTGTTCGGTGCCGTTGGCATGTGCGTGTGCCAGCTGATCGTAGCTATTGT
GGGCATGGTGGCTTCCTCGGACGTGGCCAATAAGGTCCTGATCGCCTTTG
TCTGCATCTACATCTTCTTCTTTGCCAGCTCTTGGGGCCCCGTCGCGTGG
GTTGTGACCGGTGAACTGTACCCCCTCAAGGCTCGTGCCAAGTGTCTCTC
CATCACGACGGCCACCAACTGGCTGCTGAACTGGGCCATCGCCTATGCCA
CCCCCTACATGGTGGATTCCGGCCCGGGTAACGCGAACCTGCAATCCAAG
GTGTTCTTCATCTGGGGCGGCTTCTGCTTCATTGCGGGAGTGTTTGTGTA
CACCTGCATCTACGAGACCAAGGGGCTCAGTCTGGAGCAGGTGGACGAGC
TCTATTCGAAGGTGTCGTCAGCCTGGCGCTCTCCAGGATTCATCCCTTCG
GCGCATTTCGCCGGTGCGGATACCGAAAAGGCCGGGCCGAGTGTGTACGA
AGTGGAGGGTGAACTTCCTCAGAAGCGCGAGTCGCAGCACATTGAGACCG
CTTAA back to topCoding sequence (CDS) from alignment at An15:936381..938135+ >CBS51388_009463-T1 ID=CBS51388_009463-T1|Name=CBS51388_009463-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6336bp|location=Sequence derived from alignment at An15:936381..938135+ (Aspergillus niger CBS 513.88)
ATGGGTTTCTTGTTGAAGAGACCGGATGATGCGGTGGGCTCAGCGGCCCC
CGCCATCATGATCGGTCTGTTTGTCTCCTTTGGAGGTATCCTCTTCGGAT
ATGACACCGGAACCATCAGTGGTATCCTGGCCATGAAGTTCTGGCGGAAG
ATGTTCTCTACCGGATACATCAACCCCGCCGATGACTACCCCGATGTAAC
CTCATCTCAGTCTTCCATGATTGTGTCATTGCTCTCTGCCGGTACTTTCT
TTGGAGCCCTGGCCTCTGCTCCTGTTGCGGATTACTTTGGTCGCCGCATT
GCCATGATCATCGAATCATTTGTCTTCTGCTTCGGTGTGATCCTCCAAAC
CGCCGCCACCTCGATCCCGCTGTTCGTCGCTGGGCGGTTCTTTGCTGGCT
TTGGTGTTGGTCTACTCTCTGCAACTATCCCTCTCTACCAGTCTGAGACT
GCCCCGAAGTGGATTCGTGGTACCATTGTCGGCGCCTATCAGCTGGCCAT
TACTATTGGTCTGCTGCTGGCTTCTGTTGTCAACAATGCTACCAAGGACC
GCATGGACACTGGCTGCTACCGCATTCCGGTTGCCGTCCAGTTCGCATGG
GCCATCATCCTCGTTGTCGGAATGAGTGTGCTCCCCGAAACGCCACGCTT
CCTGATCAAGAAGGATAGACACGAGGCTGCGGCTAAGGCGCTTGCCCGTC
TTCGTCGGATGAATGTTGACGACCAGGCCGTCGTGGATGAGTTGGTGGAA
ATCCGCGCCTCCCACGAGTACGAGATGAGCGTGGGCAAGGCGAGCTTCCG
CGAAATTGTGACTGGCTCCTTGGGTAAGCGGTTGGCCACCGGATGTGCTG
TGCAGGCGCTGCAACAACTCGCTGGAGTCAACTTCATCTTTTACTACGGA
ACGACCTTTTTCCAACGCTCCGGCATCCAGAACAGCTTTACCATCACGCT
CATTACCAACATTGTCAACGTGGTCTCCACGTTCCCGGGTCTGTACATGG
TTGAGAAATGGGGTCGCCGGCCCTTGCTGCTGTTCGGTGCCGTTGGCATG
TGCGTGTGCCAGCTGATCGTAGCTATTGTGGGCATGGTGGCTTCCTCGGA
CGTGGCCAATAAGGTCCTGATCGCCTTTGTCTGCATCTACATCTTCTTCT
TTGCCAGCTCTTGGGGCCCCGTCGCGTGGGTTGTGACCGGTGAACTGTAC
CCCCTCAAGGCTCGTGCCAAGTGTCTCTCCATCACGACGGCCACCAACTG
GCTGCTGAACTGGGCCATCGCCTATGCCACCCCCTACATGGTGGATTCCG
GCCCGGGTAACGCGAACCTGCAATCCAAGGTGTTCTTCATCTGGGGCGGC
TTCTGCTTCATTGCGGGAGTGTTTGTGTACACCTGCATCTACGAGACCAA
GGGGCTCAGTCTGGAGCAGGTGGACGAGCTCTATTCGAAGGTGTCGTCAG
CCTGGCGCTCTCCAGGATTCATCCCTTCGGCGCATTTCGCCGGTGCGGAT
ACCGAAAAGGCCGGGCCGAGTGTGTACGAAGTGGAGGGTGAACTTCCTCA
GAAGCGCGAGTCGCAGCACATTGAGACCGCTTAAATGGGTTTCTTGTTGA
AGAGACCGGATGATGCGGTGGGCTCAGCGGCCCCCGCCATCATGATCGGT
CTGTTTGTCTCCTTTGGAGGTATCCTCTTCGGATATGACACCGGAACCAT
CAGTGGTATCCTGGCCATGAAGTTCTGGCGGAAGATGTTCTCTACCGGAT
ACATCAACCCCGCCGATGACTACCCCGATGTAACCTCATCTCAGTCTTCC
ATGATTGTGTCATTGCTCTCTGCCGGTACTTTCTTTGGAGCCCTGGCCTC
TGCTCCTGTTGCGGATTACTTTGGTCGCCGCATTGCCATGATCATCGAAT
CATTTGTCTTCTGCTTCGGTGTGATCCTCCAAACCGCCGCCACCTCGATC
CCGCTGTTCGTCGCTGGGCGGTTCTTTGCTGGCTTTGGTGTTGGTCTACT
CTCTGCAACTATCCCTCTCTACCAGTCTGAGACTGCCCCGAAGTGGATTC
GTGGTACCATTGTCGGCGCCTATCAGCTGGCCATTACTATTGGTCTGCTG
CTGGCTTCTGTTGTCAACAATGCTACCAAGGACCGCATGGACACTGGCTG
CTACCGCATTCCGGTTGCCGTCCAGTTCGCATGGGCCATCATCCTCGTTG
TCGGAATGAGTGTGCTCCCCGAAACGCCACGCTTCCTGATCAAGAAGGAT
AGACACGAGGCTGCGGCTAAGGCGCTTGCCCGTCTTCGTCGGATGAATGT
TGACGACCAGGCCGTCGTGGATGAGTTGGTGGAAATCCGCGCCTCCCACG
AGTACGAGATGAGCGTGGGCAAGGCGAGCTTCCGCGAAATTGTGACTGGC
TCCTTGGGTAAGCGGTTGGCCACCGGATGTGCTGTGCAGGCGCTGCAACA
ACTCGCTGGAGTCAACTTCATCTTTTACTACGGAACGACCTTTTTCCAAC
GCTCCGGCATCCAGAACAGCTTTACCATCACGCTCATTACCAACATTGTC
AACGTGGTCTCCACGTTCCCGGGTCTGTACATGGTTGAGAAATGGGGTCG
CCGGCCCTTGCTGCTGTTCGGTGCCGTTGGCATGTGCGTGTGCCAGCTGA
TCGTAGCTATTGTGGGCATGGTGGCTTCCTCGGACGTGGCCAATAAGGTC
CTGATCGCCTTTGTCTGCATCTACATCTTCTTCTTTGCCAGCTCTTGGGG
CCCCGTCGCGTGGGTTGTGACCGGTGAACTGTACCCCCTCAAGGCTCGTG
CCAAGTGTCTCTCCATCACGACGGCCACCAACTGGCTGCTGAACTGGGCC
ATCGCCTATGCCACCCCCTACATGGTGGATTCCGGCCCGGGTAACGCGAA
CCTGCAATCCAAGGTGTTCTTCATCTGGGGCGGCTTCTGCTTCATTGCGG
GAGTGTTTGTGTACACCTGCATCTACGAGACCAAGGGGCTCAGTCTGGAG
CAGGTGGACGAGCTCTATTCGAAGGTGTCGTCAGCCTGGCGCTCTCCAGG
ATTCATCCCTTCGGCGCATTTCGCCGGTGCGGATACCGAAAAGGCCGGGC
CGAGTGTGTACGAAGTGGAGGGTGAACTTCCTCAGAAGCGCGAGTCGCAG
CACATTGAGACCGCTTAAATGGGTTTCTTGTTGAAGAGACCGGATGATGC
GGTGGGCTCAGCGGCCCCCGCCATCATGATCGGTCTGTTTGTCTCCTTTG
GAGGTATCCTCTTCGGATATGACACCGGAACCATCAGTGGTATCCTGGCC
ATGAAGTTCTGGCGGAAGATGTTCTCTACCGGATACATCAACCCCGCCGA
TGACTACCCCGATGTAACCTCATCTCAGTCTTCCATGATTGTGTCATTGC
TCTCTGCCGGTACTTTCTTTGGAGCCCTGGCCTCTGCTCCTGTTGCGGAT
TACTTTGGTCGCCGCATTGCCATGATCATCGAATCATTTGTCTTCTGCTT
CGGTGTGATCCTCCAAACCGCCGCCACCTCGATCCCGCTGTTCGTCGCTG
GGCGGTTCTTTGCTGGCTTTGGTGTTGGTCTACTCTCTGCAACTATCCCT
CTCTACCAGTCTGAGACTGCCCCGAAGTGGATTCGTGGTACCATTGTCGG
CGCCTATCAGCTGGCCATTACTATTGGTCTGCTGCTGGCTTCTGTTGTCA
ACAATGCTACCAAGGACCGCATGGACACTGGCTGCTACCGCATTCCGGTT
GCCGTCCAGTTCGCATGGGCCATCATCCTCGTTGTCGGAATGAGTGTGCT
CCCCGAAACGCCACGCTTCCTGATCAAGAAGGATAGACACGAGGCTGCGG
CTAAGGCGCTTGCCCGTCTTCGTCGGATGAATGTTGACGACCAGGCCGTC
GTGGATGAGTTGGTGGAAATCCGCGCCTCCCACGAGTACGAGATGAGCGT
GGGCAAGGCGAGCTTCCGCGAAATTGTGACTGGCTCCTTGGGTAAGCGGT
TGGCCACCGGATGTGCTGTGCAGGCGCTGCAACAACTCGCTGGAGTCAAC
TTCATCTTTTACTACGGAACGACCTTTTTCCAACGCTCCGGCATCCAGAA
CAGCTTTACCATCACGCTCATTACCAACATTGTCAACGTGGTCTCCACGT
TCCCGGGTCTGTACATGGTTGAGAAATGGGGTCGCCGGCCCTTGCTGCTG
TTCGGTGCCGTTGGCATGTGCGTGTGCCAGCTGATCGTAGCTATTGTGGG
CATGGTGGCTTCCTCGGACGTGGCCAATAAGGTCCTGATCGCCTTTGTCT
GCATCTACATCTTCTTCTTTGCCAGCTCTTGGGGCCCCGTCGCGTGGGTT
GTGACCGGTGAACTGTACCCCCTCAAGGCTCGTGCCAAGTGTCTCTCCAT
CACGACGGCCACCAACTGGCTGCTGAACTGGGCCATCGCCTATGCCACCC
CCTACATGGTGGATTCCGGCCCGGGTAACGCGAACCTGCAATCCAAGGTG
TTCTTCATCTGGGGCGGCTTCTGCTTCATTGCGGGAGTGTTTGTGTACAC
CTGCATCTACGAGACCAAGGGGCTCAGTCTGGAGCAGGTGGACGAGCTCT
ATTCGAAGGTGTCGTCAGCCTGGCGCTCTCCAGGATTCATCCCTTCGGCG
CATTTCGCCGGTGCGGATACCGAAAAGGCCGGGCCGAGTGTGTACGAAGT
GGAGGGTGAACTTCCTCAGAAGCGCGAGTCGCAGCACATTGAGACCGCTT
AAATGGGTTTCTTGTTGAAGAGACCGGATGATGCGGTGGGCTCAGCGGCC
CCCGCCATCATGATCGGTCTGTTTGTCTCCTTTGGAGGTATCCTCTTCGG
ATATGACACCGGAACCATCAGTGGTATCCTGGCCATGAAGTTCTGGCGGA
AGATGTTCTCTACCGGATACATCAACCCCGCCGATGACTACCCCGATGTA
ACCTCATCTCAGTCTTCCATGATTGTGTCATTGCTCTCTGCCGGTACTTT
CTTTGGAGCCCTGGCCTCTGCTCCTGTTGCGGATTACTTTGGTCGCCGCA
TTGCCATGATCATCGAATCATTTGTCTTCTGCTTCGGTGTGATCCTCCAA
ACCGCCGCCACCTCGATCCCGCTGTTCGTCGCTGGGCGGTTCTTTGCTGG
CTTTGGTGTTGGTCTACTCTCTGCAACTATCCCTCTCTACCAGTCTGAGA
CTGCCCCGAAGTGGATTCGTGGTACCATTGTCGGCGCCTATCAGCTGGCC
ATTACTATTGGTCTGCTGCTGGCTTCTGTTGTCAACAATGCTACCAAGGA
CCGCATGGACACTGGCTGCTACCGCATTCCGGTTGCCGTCCAGTTCGCAT
GGGCCATCATCCTCGTTGTCGGAATGAGTGTGCTCCCCGAAACGCCACGC
TTCCTGATCAAGAAGGATAGACACGAGGCTGCGGCTAAGGCGCTTGCCCG
TCTTCGTCGGATGAATGTTGACGACCAGGCCGTCGTGGATGAGTTGGTGG
AAATCCGCGCCTCCCACGAGTACGAGATGAGCGTGGGCAAGGCGAGCTTC
CGCGAAATTGTGACTGGCTCCTTGGGTAAGCGGTTGGCCACCGGATGTGC
TGTGCAGGCGCTGCAACAACTCGCTGGAGTCAACTTCATCTTTTACTACG
GAACGACCTTTTTCCAACGCTCCGGCATCCAGAACAGCTTTACCATCACG
CTCATTACCAACATTGTCAACGTGGTCTCCACGTTCCCGGGTCTGTACAT
GGTTGAGAAATGGGGTCGCCGGCCCTTGCTGCTGTTCGGTGCCGTTGGCA
TGTGCGTGTGCCAGCTGATCGTAGCTATTGTGGGCATGGTGGCTTCCTCG
GACGTGGCCAATAAGGTCCTGATCGCCTTTGTCTGCATCTACATCTTCTT
CTTTGCCAGCTCTTGGGGCCCCGTCGCGTGGGTTGTGACCGGTGAACTGT
ACCCCCTCAAGGCTCGTGCCAAGTGTCTCTCCATCACGACGGCCACCAAC
TGGCTGCTGAACTGGGCCATCGCCTATGCCACCCCCTACATGGTGGATTC
CGGCCCGGGTAACGCGAACCTGCAATCCAAGGTGTTCTTCATCTGGGGCG
GCTTCTGCTTCATTGCGGGAGTGTTTGTGTACACCTGCATCTACGAGACC
AAGGGGCTCAGTCTGGAGCAGGTGGACGAGCTCTATTCGAAGGTGTCGTC
AGCCTGGCGCTCTCCAGGATTCATCCCTTCGGCGCATTTCGCCGGTGCGG
ATACCGAAAAGGCCGGGCCGAGTGTGTACGAAGTGGAGGGTGAACTTCCT
CAGAAGCGCGAGTCGCAGCACATTGAGACCGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:936381..938135 + |
|
