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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:989638..990662+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009477-T1 ID=CBS51388_009477-T1|Name=CBS51388_009477-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1025bp|location=Sequence derived from alignment at An15:989638..990662+ (Aspergillus niger CBS 513.88)
ATGACAAACGAAAAACAAACCTGGTTTATTACAGGCTGCTCCAGTGGCTT
CGGGGAACAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAGGAGCTCACGTGAGTT
TTGGCCTGAGGACTTCAAGTCTTTTTGTTTGATAATTACATTTGGGAAGG
ATATGTTTGACTGACTGAGACGTTAGACCGGAGGATATGAAACGATCCCT
CGACACTAACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGC
ATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGA
TCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCATCCGCGTACTGTGCCAG
TAAATTTGCTTTAGAAGGTATGTTTTACCAGTCTGTCCATCTGCTCCTAC
ACGACGAAGCTGACAGTAAAACTCTTTCCCACCACAGGAGCCGTTGAAAG
CCTCTCGAAAGAGCTAGGCTGGCTTGCACCAGGCATTAAACCCCTCATTA
TAGAAGCAGGCATCTTCAGCACTGAAGTCATGAGGAATATCAACCATGTT
CCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCG
CGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTGGATTTGATTG
CCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAG
ATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGA
GAAGGCGCGGGATATGATGCGCATTGCAGAGGAAGGGAAGAGATTGCCCG
CAAAGGGCGAATTCGCGGCCGCTAA back to topCoding sequence (CDS) from alignment at An15:989638..990662+ >CBS51388_009477-T1 ID=CBS51388_009477-T1|Name=CBS51388_009477-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3048bp|location=Sequence derived from alignment at An15:989638..990662+ (Aspergillus niger CBS 513.88)
ATGACAAACGAAAAACAAACCTGGTTTATTACAGGCTGCTCCAGTGGCTT
CGGGGAACAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAGGAGCTCACACCGGAG
GATATGAAACGATCCCTCGACACTAACTTCCATGGGCCTATCAACCTGAC
CCGCGCTGCATTGCCGCATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGAG
CCGTTGAAAGCCTCTCGAAAGAGCTAGGCTGGCTTGCACCAGGCATTAAA
CCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAAGTCATGAGGAATAT
CAACCATGTTCCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGT
GTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTG
GATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGA
GGGCAAAGAGATCCCATTGCGTGTGCCGTTTGGTAGAGAAGGCGCGGGAT
ATGATGCGCATTGCAGAGGAAGGGAAGAGATTGCCCGCAAAGGGCGAATT
CGCGGCCGCTAAATGACAAACGAAAAACAAACCTGGTTTATTACAGGCTG
CTCCAGTGGCTTCGGGGAACAGTTTGTACGCCAACTTCGCGAACGGGGTG
ACAACGTCGTCGCCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTG
AAGGATACCGGTGCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGA
AGAGCTGAACGCGAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCG
ATGTACTCGTGAACAACGCGGGGTACATTCAATGCGGGGCTATCGAGGAG
CTCACACCGGAGGATATGAAACGATCCCTCGACACTAACTTCCATGGGCC
TATCAACCTGACCCGCGCTGCATTGCCGCATTTTCGCAGCAAGGGTGAGA
AGGGTCAAGGAGCCGTTGAAAGCCTCTCGAAAGAGCTAGGCTGGCTTGCA
CCAGGCATTAAACCCCTCATTATAGAAGCAGGCATCTTCAGCACTGAAGT
CATGAGGAATATCAACCATGTTCCTTACCGAGTCGATTTCTACCGGGGCC
TTAACGACGCGTGTCGCGTGCGCGGAGAAGGCAACTACCGCAACCCACCG
GGCAATGCCGTGGATTTGATTGCCAAGATCATCCAGATTGCGAAGGGAGA
GGGTATTGCAGAGGGCAAAGAGATCCCATTGCGTGTGCCGTTTGGTAGAG
AAGGCGCGGGATATGATGCGCATTGCAGAGGAAGGGAAGAGATTGCCCGC
AAAGGGCGAATTCGCGGCCGCTAAATGACAAACGAAAAACAAACCTGGTT
TATTACAGGCTGCTCCAGTGGCTTCGGGGAACAGTTTGTACGCCAACTTC
GCGAACGGGGTGACAACGTCGTCGCCACAGGCCGGAATGCTGAGAGCAAA
CTTGCGCACCTGAAGGATACCGGTGCCACTATCCTTGAACTCGATGTTAC
GGCACCTCAGGAAGAGCTGAACGCGAAGTTTCAGCAGGCCATCGATATCT
ATGGGGGAGTCGATGTACTCGTGAACAACGCGGGGTACATTCAATGCGGG
GCTATCGAGGAGCTCACACCGGAGGATATGAAACGATCCCTCGACACTAA
CTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGCATTTTCGCA
GCAAGGGTGAGAAGGGTCAAGGAGCCGTTGAAAGCCTCTCGAAAGAGCTA
GGCTGGCTTGCACCAGGCATTAAACCCCTCATTATAGAAGCAGGCATCTT
CAGCACTGAAGTCATGAGGAATATCAACCATGTTCCTTACCGAGTCGATT
TCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGGAGAAGGCAACTAC
CGCAACCCACCGGGCAATGCCGTGGATTTGATTGCCAAGATCATCCAGAT
TGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAGATCCCATTGCGTGTGC
CGTTTGGTAGAGAAGGCGCGGGATATGATGCGCATTGCAGAGGAAGGGAA
GAGATTGCCCGCAAAGGGCGAATTCGCGGCCGCTAAATGACAAACGAAAA
ACAAACCTGGTTTATTACAGGCTGCTCCAGTGGCTTCGGGGAACAGTTTG
TACGCCAACTTCGCGAACGGGGTGACAACGTCGTCGCCACAGGCCGGAAT
GCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGTGCCACTATCCTTGA
ACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGCGAAGTTTCAGCAGG
CCATCGATATCTATGGGGGAGTCGATGTACTCGTGAACAACGCGGGGTAC
ATTCAATGCGGGGCTATCGAGGAGCTCACACCGGAGGATATGAAACGATC
CCTCGACACTAACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGC
CGCATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGAGCCGTTGAAAGCCTC
TCGAAAGAGCTAGGCTGGCTTGCACCAGGCATTAAACCCCTCATTATAGA
AGCAGGCATCTTCAGCACTGAAGTCATGAGGAATATCAACCATGTTCCTT
ACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGGA
GAAGGCAACTACCGCAACCCACCGGGCAATGCCGTGGATTTGATTGCCAA
GATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAGATCC
CATTGCGTGTGCCGTTTGGTAGAGAAGGCGCGGGATATGATGCGCATTGC
AGAGGAAGGGAAGAGATTGCCCGCAAAGGGCGAATTCGCGGCCGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019290 | siderophore biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008667 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_15.2 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | InterPro:IPR003560 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:989638..990662 + |
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