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CBS51388_009513-T1, CBS51388_009513-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009513-T1
Unique NameCBS51388_009513-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:1074611..1075767+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009513-T1 ID=CBS51388_009513-T1|Name=CBS51388_009513-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1157bp|location=Sequence derived from alignment at An15:1074611..1075767+ (Aspergillus niger CBS 513.88)
ATGAAGTATCTCCCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTAC
GGCTTCCGCCCATTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTT
CTGCGGATTGGCAGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAG
CCGACCAAGTACACCAGCACCTTTGACAATCTGACACCCAATGATAACGA
CTTCCGCTGTAACCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCG
CTGAGGTCGCCGCGGGCGATACTATCGGGATGAAGCTCTTCTACGACACC
AGTATTGCGCATCCTGGTCCGGGTCAAGTTTGTATGAGTCACCCCCTCAC
CCCCTGTCATGGTAACTCATCTTCTAATCATCCTACTCTCCCGAACCGCA
GATATGTCCAAGGCACCCACCGGCAATGTCCAGGAATACGAAGGCGACGG
GGAATGGTTCAAAATCTGGGAAAAGACTCTTTGCAACGAGAATGCCGACT
TGACCAAGGACGCCTGGTGCACCTGGGGCATGTCTCAATTCGAGTTCCAA
ATCCCTGCTGAGACCCCGGCGGGCGAGTACCTGGTGCGCGCCGAGCATGT
GGGCTTGCACGGCGCTCAGGCCAACGAGGCTGAATTCTTCTACAGGTGAG
ACAACCGCTCCCAGATTTATGATATTCAAGGAGCAACAGTATTGATACCA
AGATTCTAGCTGTGCGCAAGTCAAGGTCACAGGCTCGGGAACTGGATCTC
CGAGTCTGACGTACAAAATCCCTGGTCTCTACAACGACAACATGACCCTG
TTCAACGGCCTCAATCTGTGGGTCGACTCAGCCGAGAAGATAGAGACGGA
TATCCTGGAGACGCCAATTGGTGATGATGTGTGGAGTGGACATGGCTCGG
AAAGCTCGTCTGCTGCCTCCCCTTCGGTCAGCAGTGCATCTGTCGCAAGC
CCGGGTACAACTACCGCTGTTGCGCACGCCCATGTTCAGACCCCTGCCAG
CAGCAGCACTTCTTCGACGGCCGCTAGCTCGGGCAATCTTGTTTCGCACT
GGGGTCAATGCGGAGGCCTCAATTATGCCGGCCCAACCGAGTGTGAGTCG
CCTTGCACCTGTGTGGAGCAGAACCCTTGGTACCATCAATGCGTGACTTC
GTCTTGA
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Coding sequence (CDS) from alignment at An15:1074611..1075767+

>CBS51388_009513-T1 ID=CBS51388_009513-T1|Name=CBS51388_009513-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3069bp|location=Sequence derived from alignment at An15:1074611..1075767+ (Aspergillus niger CBS 513.88)
ATGAAGTATCTCCCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTAC
GGCTTCCGCCCATTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTT
CTGCGGATTGGCAGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAG
CCGACCAAGTACACCAGCACCTTTGACAATCTGACACCCAATGATAACGA
CTTCCGCTGTAACCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCG
CTGAGGTCGCCGCGGGCGATACTATCGGGATGAAGCTCTTCTACGACACC
AGTATTGCGCATCCTGGTCCGGGTCAAGTTTATATGTCCAAGGCACCCAC
CGGCAATGTCCAGGAATACGAAGGCGACGGGGAATGGTTCAAAATCTGGG
AAAAGACTCTTTGCAACGAGAATGCCGACTTGACCAAGGACGCCTGGTGC
ACCTGGGGCATGTCTCAATTCGAGTTCCAAATCCCTGCTGAGACCCCGGC
GGGCGAGTACCTGGTGCGCGCCGAGCATGTGGGCTTGCACGGCGCTCAGG
CCAACGAGGCTGAATTCTTCTACAGCTGTGCGCAAGTCAAGGTCACAGGC
TCGGGAACTGGATCTCCGAGTCTGACGTACAAAATCCCTGGTCTCTACAA
CGACAACATGACCCTGTTCAACGGCCTCAATCTGTGGGTCGACTCAGCCG
AGAAGATAGAGACGGATATCCTGGAGACGCCAATTGGTGATGATGTGTGG
AGTGGACATGGCTCGGAAAGCTCGTCTGCTGCCTCCCCTTCGGTCAGCAG
TGCATCTGTCGCAAGCCCGGGTACAACTACCGCTGTTGCGCACGCCCATG
TTCAGACCCCTGCCAGCAGCAGCACTTCTTCGACGGCCGCTAGCTCGGGC
AATCTTGTTTCGCACTGGGGTCAATGCGGAGGCCTCAATTATGCCGGCCC
AACCGAGTGTGAGTCGCCTTGCACCTGTGTGGAGCAGAACCCTTGGTACC
ATCAATGCGTGACTTCGTCTTGAATGAAGTATCTCCCTCTCGTCGTTGCA
GCCACTGCCAGCCTGGCACCTACGGCTTCCGCCCATTATATCTTCAGCAA
GCTCGTGCTGAACGGAGAGGCTTCTGCGGATTGGCAGTACATTCGTGAGA
CTACTCGCAGTGTAGTCTACGAGCCGACCAAGTACACCAGCACCTTTGAC
AATCTGACACCCAATGATAACGACTTCCGCTGTAACCTGGGCTCGTTCAG
CAATGCTGCCAAGACTGAGGTCGCTGAGGTCGCCGCGGGCGATACTATCG
GGATGAAGCTCTTCTACGACACCAGTATTGCGCATCCTGGTCCGGGTCAA
GTTTATATGTCCAAGGCACCCACCGGCAATGTCCAGGAATACGAAGGCGA
CGGGGAATGGTTCAAAATCTGGGAAAAGACTCTTTGCAACGAGAATGCCG
ACTTGACCAAGGACGCCTGGTGCACCTGGGGCATGTCTCAATTCGAGTTC
CAAATCCCTGCTGAGACCCCGGCGGGCGAGTACCTGGTGCGCGCCGAGCA
TGTGGGCTTGCACGGCGCTCAGGCCAACGAGGCTGAATTCTTCTACAGCT
GTGCGCAAGTCAAGGTCACAGGCTCGGGAACTGGATCTCCGAGTCTGACG
TACAAAATCCCTGGTCTCTACAACGACAACATGACCCTGTTCAACGGCCT
CAATCTGTGGGTCGACTCAGCCGAGAAGATAGAGACGGATATCCTGGAGA
CGCCAATTGGTGATGATGTGTGGAGTGGACATGGCTCGGAAAGCTCGTCT
GCTGCCTCCCCTTCGGTCAGCAGTGCATCTGTCGCAAGCCCGGGTACAAC
TACCGCTGTTGCGCACGCCCATGTTCAGACCCCTGCCAGCAGCAGCACTT
CTTCGACGGCCGCTAGCTCGGGCAATCTTGTTTCGCACTGGGGTCAATGC
GGAGGCCTCAATTATGCCGGCCCAACCGAGTGTGAGTCGCCTTGCACCTG
TGTGGAGCAGAACCCTTGGTACCATCAATGCGTGACTTCGTCTTGAATGA
AGTATCTCCCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTACGGCT
TCCGCCCATTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTTCTGC
GGATTGGCAGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAGCCGA
CCAAGTACACCAGCACCTTTGACAATCTGACACCCAATGATAACGACTTC
CGCTGTAACCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCGCTGA
GGTCGCCGCGGGCGATACTATCGGGATGAAGCTCTTCTACGACACCAGTA
TTGCGCATCCTGGTCCGGGTCAAGTTTATATGTCCAAGGCACCCACCGGC
AATGTCCAGGAATACGAAGGCGACGGGGAATGGTTCAAAATCTGGGAAAA
GACTCTTTGCAACGAGAATGCCGACTTGACCAAGGACGCCTGGTGCACCT
GGGGCATGTCTCAATTCGAGTTCCAAATCCCTGCTGAGACCCCGGCGGGC
GAGTACCTGGTGCGCGCCGAGCATGTGGGCTTGCACGGCGCTCAGGCCAA
CGAGGCTGAATTCTTCTACAGCTGTGCGCAAGTCAAGGTCACAGGCTCGG
GAACTGGATCTCCGAGTCTGACGTACAAAATCCCTGGTCTCTACAACGAC
AACATGACCCTGTTCAACGGCCTCAATCTGTGGGTCGACTCAGCCGAGAA
GATAGAGACGGATATCCTGGAGACGCCAATTGGTGATGATGTGTGGAGTG
GACATGGCTCGGAAAGCTCGTCTGCTGCCTCCCCTTCGGTCAGCAGTGCA
TCTGTCGCAAGCCCGGGTACAACTACCGCTGTTGCGCACGCCCATGTTCA
GACCCCTGCCAGCAGCAGCACTTCTTCGACGGCCGCTAGCTCGGGCAATC
TTGTTTCGCACTGGGGTCAATGCGGAGGCCTCAATTATGCCGGCCCAACC
GAGTGTGAGTCGCCTTGCACCTGTGTGGAGCAGAACCCTTGGTACCATCA
ATGCGTGACTTCGTCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009513CBS51388_009513Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009513-T1.exon1CBS51388_009513-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009513-T1.exon2CBS51388_009513-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009513-T1.exon3CBS51388_009513-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009513-T1.cdsCBS51388_009513-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009513-T1CBS51388_009513-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:1074611..1075767 +
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