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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:1112164..1114364+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009529-T1 ID=CBS51388_009529-T1|Name=CBS51388_009529-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2201bp|location=Sequence derived from alignment at An15:1112164..1114364+ (Aspergillus niger CBS 513.88)
ATGCCCGCTCTCAGGCGGAAGAATGGCCGAGAGCCAGCTTGTGAGGCATG
CCGCCGACGCAAACTGGCCTGCGACCACGAAACCCCCGCCTGCCAGCGGT
GTCGGAGACTATCCTTGAAATGCGTCTATCTTGCCAATCCACTCACCAAA
GGCAGAGCGAGAAGCCTGCCTGAGGCTGACTCGCCGACTGTCTTGAGCAA
TGAGAGCGAGGGTGTCCCAAGTACCAAAACCTGCCCGGGAGCCCAGTCAA
CCACGCCCATCCTCGAAAGCTCAGCCGAGTACCTGGGGCCCACGAGTTTT
TCATCTGTATTTGTAGAACATCGGGATCGATTCGAAGTGGATCAGACCCT
GAAAACGCCCACTGGAGGGGGTATCGATGGTGTCGGGGCGCAATCACCCA
CCCAGCCGGGGAACCCTACCATCACGCCGAGAATGCTCCAACTGGGGATA
CAGATCCTACAAAACCTGCCGGATGAACGAACATGTAACTTACTTTTCGT
TCATCCGATGGCTTTGATGGATGCCTGTTTCCGACCAGCTTATCGAGTCG
CGTCTGATAAGATGTGGGATGAGTATCGAGACGTGCTCCGGCTGCGGAAC
AGCGAGCACCTACAGTTTGTTGCGAAGCGGTTTTCAGAGTGCAGTCTAAC
GCCTTTACCGGCTGTACAAGATCCACACCGCTGGATCGAGTCTTTCTCGG
GAAAGAGAACTCGTTGGGAGCTTCTAGGATCCTTGTTCACTTTTTGGTCG
TCTGCAGCCTCACAGTTGCCGGTACAGCACGATATCATCACCCAGTACTG
TCAGCAACATGCGTTCAAGAGACCCAAAGACCTTATGGTGCATCTGAAAC
GGTGTGCGTCCATGTGCATTGAGCTGTGTAGTCAGCTGGGTGCAATTAAT
ATTCTTTTTGTCAATTTGGCGTTCAAACATAACATCCTCGAGAGCATTGC
CAGTGGTGATAAGAGTAAGTCCTAACCCGGAGATATCCAAGCATAGCACA
TAGCACTGATCAACAGGCCTTTCTTGCTGGCGCCAACATGGCGATGTAAT
TGCAGTCACGACATCAATCGGGCTTCACCGGGAATTATCATCTAATTGGA
ACGAGGTTTCATTCCAGCACGAACTCAAGCGACGAGTCTACGCATCGATT
TACAATTTCGACAAGGTCATCTCCACATTTACCGGCAGACCACCGCTCCT
GAACAGAAAGTACTCGACGACCAAGCTGCCGCTGGACATTGACGACGAGG
ATATATTCTCCGGCAGAATTGGCGATGCCGTGGCAAAGCTCAACTCAAAT
GGTTGGGACAGCAGCGAAGACCGACAGCCGTATCCTGCCACCATCTTGCG
GGCGCGAGCAATGCTAGCAAGGAACCGCGAAGAGATGCTAGAAGTTTTAG
AGACTTCGCAGGATAGCATCACAGATGCTGCAGTTCAAACATGCCTGTAT
GACTTCAGCCCAATCTGTATCCCTCGCACTTGCAACTGCTGACAAGCAAA
CAGCCACCTCAAAGCACAAGCTACAGACATCTACGCACAATTCCCCGAAG
TCATCAAGTTTAAAGCAGAACACGTCCACGACCGCGACATGCCCGGCCAG
CTGCTCGCTTTGCGTGTCCTTGTGCGCTTGGATTTTCTGCTCAACCTGTT
CATCTTAGAGCGACTACTGACCCGACACAGGGTGGTTGACGAGCAGGCGC
TAATCCAGGTTAGCCATGAAATGGTAGGATTAACCTTGATATACTGGAAG
CACAAGGACCGGTTCGAGAATCACGTTGATTTTTCCTGGCTGGTATGACT
CACAGCCCCCTTTAAATAGATACACCTCATCAATACTGACGCGACATGCT
CAGGCTATGTCCTACGCCGTCCCAGGCAGCGGTATTCTCTGCCTTGAGCT
GCTCCGCCAATCGAGCTCTCCCGAAACGTACACCTTAGAACTTCCCCGAT
CGGACATCATCCAGGACCTCAGTGTACTGGTCGCCTTCCTCGACTGGCTC
CGCCCCTCGGAATCCGACATCGCAGCCAAGGCGCAAATCAAGGGAATATT
GCAACGCTCATTGGACCGAATTCTCAGCATGCCGGCATCGCTGCACAGTC
CGACGAGAGCCCTGGACGCGCTGCCCGACTTTGTAGGCGCAGATCCCCAT
CTCGACTTGTTAAACACATTCGCGTGGGTAGATTGGGATGCCGCATTATA
G back to topCoding sequence (CDS) from alignment at An15:1112164..1114364+ >CBS51388_009529-T1 ID=CBS51388_009529-T1|Name=CBS51388_009529-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8124bp|location=Sequence derived from alignment at An15:1112164..1114364+ (Aspergillus niger CBS 513.88)
ATGCCCGCTCTCAGGCGGAAGAATGGCCGAGAGCCAGCTTGTGAGGCATG
CCGCCGACGCAAACTGGCCTGCGACCACGAAACCCCCGCCTGCCAGCGGT
GTCGGAGACTATCCTTGAAATGCGTCTATCTTGCCAATCCACTCACCAAA
GGCAGAGCGAGAAGCCTGCCTGAGGCTGACTCGCCGACTGTCTTGAGCAA
TGAGAGCGAGGGTGTCCCAAGTACCAAAACCTGCCCGGGAGCCCAGTCAA
CCACGCCCATCCTCGAAAGCTCAGCCGAGTACCTGGGGCCCACGAGTTTT
TCATCTGTATTTGTAGAACATCGGGATCGATTCGAAGTGGATCAGACCCT
GAAAACGCCCACTGGAGGGGGTATCGATGGTGTCGGGGCGCAATCACCCA
CCCAGCCGGGGAACCCTACCATCACGCCGAGAATGCTCCAACTGGGGATA
CAGATCCTACAAAACCTGCCGGATGAACGAACATGTAACTTACTTTTCGT
TCATCCGATGGCTTTGATGGATGCCTGTTTCCGACCAGCTTATCGAGTCG
CGTCTGATAAGATGTGGGATGAGTATCGAGACGTGCTCCGGCTGCGGAAC
AGCGAGCACCTACAGTTTGTTGCGAAGCGGTTTTCAGAGTGCAGTCTAAC
GCCTTTACCGGCTGTACAAGATCCACACCGCTGGATCGAGTCTTTCTCGG
GAAAGAGAACTCGTTGGGAGCTTCTAGGATCCTTGTTCACTTTTTGGTCG
TCTGCAGCCTCACAGTTGCCGGTACAGCACGATATCATCACCCAGTACTG
TCAGCAACATGCGTTCAAGAGACCCAAAGACCTTATGGTGCATCTGAAAC
GGTGTGCGTCCATGTGCATTGAGCTGTGTAGTCAGCTGGGTGCAATTAAT
ATTCTTTTTGTCAATTTGGCGTTCAAACATAACATCCTCGAGAGCATTGC
CAGTGGTGATAAGAGCCTTTCTTGCTGGCGCCAACATGGCGATGTAATTG
CAGTCACGACATCAATCGGGCTTCACCGGGAATTATCATCTAATTGGAAC
GAGGTTTCATTCCAGCACGAACTCAAGCGACGAGTCTACGCATCGATTTA
CAATTTCGACAAGGTCATCTCCACATTTACCGGCAGACCACCGCTCCTGA
ACAGAAAGTACTCGACGACCAAGCTGCCGCTGGACATTGACGACGAGGAT
ATATTCTCCGGCAGAATTGGCGATGCCGTGGCAAAGCTCAACTCAAATGG
TTGGGACAGCAGCGAAGACCGACAGCCGTATCCTGCCACCATCTTGCGGG
CGCGAGCAATGCTAGCAAGGAACCGCGAAGAGATGCTAGAAGTTTTAGAG
ACTTCGCAGGATAGCATCACAGATGCTGCAGTTCAAACATGCCTCCACCT
CAAAGCACAAGCTACAGACATCTACGCACAATTCCCCGAAGTCATCAAGT
TTAAAGCAGAACACGTCCACGACCGCGACATGCCCGGCCAGCTGCTCGCT
TTGCGTGTCCTTGTGCGCTTGGATTTTCTGCTCAACCTGTTCATCTTAGA
GCGACTACTGACCCGACACAGGGTGGTTGACGAGCAGGCGCTAATCCAGG
TTAGCCATGAAATGGTAGGATTAACCTTGATATACTGGAAGCACAAGGAC
CGGTTCGAGAATCACGTTGATTTTTCCTGGCTGGCTATGTCCTACGCCGT
CCCAGGCAGCGGTATTCTCTGCCTTGAGCTGCTCCGCCAATCGAGCTCTC
CCGAAACGTACACCTTAGAACTTCCCCGATCGGACATCATCCAGGACCTC
AGTGTACTGGTCGCCTTCCTCGACTGGCTCCGCCCCTCGGAATCCGACAT
CGCAGCCAAGGCGCAAATCAAGGGAATATTGCAACGCTCATTGGACCGAA
TTCTCAGCATGCCGGCATCGCTGCACAGTCCGACGAGAGCCCTGGACGCG
CTGCCCGACTTTGTAGGCGCAGATCCCCATCTCGACTTGTTAAACACATT
CGCGTGGGTAGATTGGGATGCCGCATTATAGATGCCCGCTCTCAGGCGGA
AGAATGGCCGAGAGCCAGCTTGTGAGGCATGCCGCCGACGCAAACTGGCC
TGCGACCACGAAACCCCCGCCTGCCAGCGGTGTCGGAGACTATCCTTGAA
ATGCGTCTATCTTGCCAATCCACTCACCAAAGGCAGAGCGAGAAGCCTGC
CTGAGGCTGACTCGCCGACTGTCTTGAGCAATGAGAGCGAGGGTGTCCCA
AGTACCAAAACCTGCCCGGGAGCCCAGTCAACCACGCCCATCCTCGAAAG
CTCAGCCGAGTACCTGGGGCCCACGAGTTTTTCATCTGTATTTGTAGAAC
ATCGGGATCGATTCGAAGTGGATCAGACCCTGAAAACGCCCACTGGAGGG
GGTATCGATGGTGTCGGGGCGCAATCACCCACCCAGCCGGGGAACCCTAC
CATCACGCCGAGAATGCTCCAACTGGGGATACAGATCCTACAAAACCTGC
CGGATGAACGAACATGTAACTTACTTTTCGTTCATCCGATGGCTTTGATG
GATGCCTGTTTCCGACCAGCTTATCGAGTCGCGTCTGATAAGATGTGGGA
TGAGTATCGAGACGTGCTCCGGCTGCGGAACAGCGAGCACCTACAGTTTG
TTGCGAAGCGGTTTTCAGAGTGCAGTCTAACGCCTTTACCGGCTGTACAA
GATCCACACCGCTGGATCGAGTCTTTCTCGGGAAAGAGAACTCGTTGGGA
GCTTCTAGGATCCTTGTTCACTTTTTGGTCGTCTGCAGCCTCACAGTTGC
CGGTACAGCACGATATCATCACCCAGTACTGTCAGCAACATGCGTTCAAG
AGACCCAAAGACCTTATGGTGCATCTGAAACGGTGTGCGTCCATGTGCAT
TGAGCTGTGTAGTCAGCTGGGTGCAATTAATATTCTTTTTGTCAATTTGG
CGTTCAAACATAACATCCTCGAGAGCATTGCCAGTGGTGATAAGAGCCTT
TCTTGCTGGCGCCAACATGGCGATGTAATTGCAGTCACGACATCAATCGG
GCTTCACCGGGAATTATCATCTAATTGGAACGAGGTTTCATTCCAGCACG
AACTCAAGCGACGAGTCTACGCATCGATTTACAATTTCGACAAGGTCATC
TCCACATTTACCGGCAGACCACCGCTCCTGAACAGAAAGTACTCGACGAC
CAAGCTGCCGCTGGACATTGACGACGAGGATATATTCTCCGGCAGAATTG
GCGATGCCGTGGCAAAGCTCAACTCAAATGGTTGGGACAGCAGCGAAGAC
CGACAGCCGTATCCTGCCACCATCTTGCGGGCGCGAGCAATGCTAGCAAG
GAACCGCGAAGAGATGCTAGAAGTTTTAGAGACTTCGCAGGATAGCATCA
CAGATGCTGCAGTTCAAACATGCCTCCACCTCAAAGCACAAGCTACAGAC
ATCTACGCACAATTCCCCGAAGTCATCAAGTTTAAAGCAGAACACGTCCA
CGACCGCGACATGCCCGGCCAGCTGCTCGCTTTGCGTGTCCTTGTGCGCT
TGGATTTTCTGCTCAACCTGTTCATCTTAGAGCGACTACTGACCCGACAC
AGGGTGGTTGACGAGCAGGCGCTAATCCAGGTTAGCCATGAAATGGTAGG
ATTAACCTTGATATACTGGAAGCACAAGGACCGGTTCGAGAATCACGTTG
ATTTTTCCTGGCTGGCTATGTCCTACGCCGTCCCAGGCAGCGGTATTCTC
TGCCTTGAGCTGCTCCGCCAATCGAGCTCTCCCGAAACGTACACCTTAGA
ACTTCCCCGATCGGACATCATCCAGGACCTCAGTGTACTGGTCGCCTTCC
TCGACTGGCTCCGCCCCTCGGAATCCGACATCGCAGCCAAGGCGCAAATC
AAGGGAATATTGCAACGCTCATTGGACCGAATTCTCAGCATGCCGGCATC
GCTGCACAGTCCGACGAGAGCCCTGGACGCGCTGCCCGACTTTGTAGGCG
CAGATCCCCATCTCGACTTGTTAAACACATTCGCGTGGGTAGATTGGGAT
GCCGCATTATAGATGCCCGCTCTCAGGCGGAAGAATGGCCGAGAGCCAGC
TTGTGAGGCATGCCGCCGACGCAAACTGGCCTGCGACCACGAAACCCCCG
CCTGCCAGCGGTGTCGGAGACTATCCTTGAAATGCGTCTATCTTGCCAAT
CCACTCACCAAAGGCAGAGCGAGAAGCCTGCCTGAGGCTGACTCGCCGAC
TGTCTTGAGCAATGAGAGCGAGGGTGTCCCAAGTACCAAAACCTGCCCGG
GAGCCCAGTCAACCACGCCCATCCTCGAAAGCTCAGCCGAGTACCTGGGG
CCCACGAGTTTTTCATCTGTATTTGTAGAACATCGGGATCGATTCGAAGT
GGATCAGACCCTGAAAACGCCCACTGGAGGGGGTATCGATGGTGTCGGGG
CGCAATCACCCACCCAGCCGGGGAACCCTACCATCACGCCGAGAATGCTC
CAACTGGGGATACAGATCCTACAAAACCTGCCGGATGAACGAACATGTAA
CTTACTTTTCGTTCATCCGATGGCTTTGATGGATGCCTGTTTCCGACCAG
CTTATCGAGTCGCGTCTGATAAGATGTGGGATGAGTATCGAGACGTGCTC
CGGCTGCGGAACAGCGAGCACCTACAGTTTGTTGCGAAGCGGTTTTCAGA
GTGCAGTCTAACGCCTTTACCGGCTGTACAAGATCCACACCGCTGGATCG
AGTCTTTCTCGGGAAAGAGAACTCGTTGGGAGCTTCTAGGATCCTTGTTC
ACTTTTTGGTCGTCTGCAGCCTCACAGTTGCCGGTACAGCACGATATCAT
CACCCAGTACTGTCAGCAACATGCGTTCAAGAGACCCAAAGACCTTATGG
TGCATCTGAAACGGTGTGCGTCCATGTGCATTGAGCTGTGTAGTCAGCTG
GGTGCAATTAATATTCTTTTTGTCAATTTGGCGTTCAAACATAACATCCT
CGAGAGCATTGCCAGTGGTGATAAGAGCCTTTCTTGCTGGCGCCAACATG
GCGATGTAATTGCAGTCACGACATCAATCGGGCTTCACCGGGAATTATCA
TCTAATTGGAACGAGGTTTCATTCCAGCACGAACTCAAGCGACGAGTCTA
CGCATCGATTTACAATTTCGACAAGGTCATCTCCACATTTACCGGCAGAC
CACCGCTCCTGAACAGAAAGTACTCGACGACCAAGCTGCCGCTGGACATT
GACGACGAGGATATATTCTCCGGCAGAATTGGCGATGCCGTGGCAAAGCT
CAACTCAAATGGTTGGGACAGCAGCGAAGACCGACAGCCGTATCCTGCCA
CCATCTTGCGGGCGCGAGCAATGCTAGCAAGGAACCGCGAAGAGATGCTA
GAAGTTTTAGAGACTTCGCAGGATAGCATCACAGATGCTGCAGTTCAAAC
ATGCCTCCACCTCAAAGCACAAGCTACAGACATCTACGCACAATTCCCCG
AAGTCATCAAGTTTAAAGCAGAACACGTCCACGACCGCGACATGCCCGGC
CAGCTGCTCGCTTTGCGTGTCCTTGTGCGCTTGGATTTTCTGCTCAACCT
GTTCATCTTAGAGCGACTACTGACCCGACACAGGGTGGTTGACGAGCAGG
CGCTAATCCAGGTTAGCCATGAAATGGTAGGATTAACCTTGATATACTGG
AAGCACAAGGACCGGTTCGAGAATCACGTTGATTTTTCCTGGCTGGCTAT
GTCCTACGCCGTCCCAGGCAGCGGTATTCTCTGCCTTGAGCTGCTCCGCC
AATCGAGCTCTCCCGAAACGTACACCTTAGAACTTCCCCGATCGGACATC
ATCCAGGACCTCAGTGTACTGGTCGCCTTCCTCGACTGGCTCCGCCCCTC
GGAATCCGACATCGCAGCCAAGGCGCAAATCAAGGGAATATTGCAACGCT
CATTGGACCGAATTCTCAGCATGCCGGCATCGCTGCACAGTCCGACGAGA
GCCCTGGACGCGCTGCCCGACTTTGTAGGCGCAGATCCCCATCTCGACTT
GTTAAACACATTCGCGTGGGTAGATTGGGATGCCGCATTATAGATGCCCG
CTCTCAGGCGGAAGAATGGCCGAGAGCCAGCTTGTGAGGCATGCCGCCGA
CGCAAACTGGCCTGCGACCACGAAACCCCCGCCTGCCAGCGGTGTCGGAG
ACTATCCTTGAAATGCGTCTATCTTGCCAATCCACTCACCAAAGGCAGAG
CGAGAAGCCTGCCTGAGGCTGACTCGCCGACTGTCTTGAGCAATGAGAGC
GAGGGTGTCCCAAGTACCAAAACCTGCCCGGGAGCCCAGTCAACCACGCC
CATCCTCGAAAGCTCAGCCGAGTACCTGGGGCCCACGAGTTTTTCATCTG
TATTTGTAGAACATCGGGATCGATTCGAAGTGGATCAGACCCTGAAAACG
CCCACTGGAGGGGGTATCGATGGTGTCGGGGCGCAATCACCCACCCAGCC
GGGGAACCCTACCATCACGCCGAGAATGCTCCAACTGGGGATACAGATCC
TACAAAACCTGCCGGATGAACGAACATGTAACTTACTTTTCGTTCATCCG
ATGGCTTTGATGGATGCCTGTTTCCGACCAGCTTATCGAGTCGCGTCTGA
TAAGATGTGGGATGAGTATCGAGACGTGCTCCGGCTGCGGAACAGCGAGC
ACCTACAGTTTGTTGCGAAGCGGTTTTCAGAGTGCAGTCTAACGCCTTTA
CCGGCTGTACAAGATCCACACCGCTGGATCGAGTCTTTCTCGGGAAAGAG
AACTCGTTGGGAGCTTCTAGGATCCTTGTTCACTTTTTGGTCGTCTGCAG
CCTCACAGTTGCCGGTACAGCACGATATCATCACCCAGTACTGTCAGCAA
CATGCGTTCAAGAGACCCAAAGACCTTATGGTGCATCTGAAACGGTGTGC
GTCCATGTGCATTGAGCTGTGTAGTCAGCTGGGTGCAATTAATATTCTTT
TTGTCAATTTGGCGTTCAAACATAACATCCTCGAGAGCATTGCCAGTGGT
GATAAGAGCCTTTCTTGCTGGCGCCAACATGGCGATGTAATTGCAGTCAC
GACATCAATCGGGCTTCACCGGGAATTATCATCTAATTGGAACGAGGTTT
CATTCCAGCACGAACTCAAGCGACGAGTCTACGCATCGATTTACAATTTC
GACAAGGTCATCTCCACATTTACCGGCAGACCACCGCTCCTGAACAGAAA
GTACTCGACGACCAAGCTGCCGCTGGACATTGACGACGAGGATATATTCT
CCGGCAGAATTGGCGATGCCGTGGCAAAGCTCAACTCAAATGGTTGGGAC
AGCAGCGAAGACCGACAGCCGTATCCTGCCACCATCTTGCGGGCGCGAGC
AATGCTAGCAAGGAACCGCGAAGAGATGCTAGAAGTTTTAGAGACTTCGC
AGGATAGCATCACAGATGCTGCAGTTCAAACATGCCTCCACCTCAAAGCA
CAAGCTACAGACATCTACGCACAATTCCCCGAAGTCATCAAGTTTAAAGC
AGAACACGTCCACGACCGCGACATGCCCGGCCAGCTGCTCGCTTTGCGTG
TCCTTGTGCGCTTGGATTTTCTGCTCAACCTGTTCATCTTAGAGCGACTA
CTGACCCGACACAGGGTGGTTGACGAGCAGGCGCTAATCCAGGTTAGCCA
TGAAATGGTAGGATTAACCTTGATATACTGGAAGCACAAGGACCGGTTCG
AGAATCACGTTGATTTTTCCTGGCTGGCTATGTCCTACGCCGTCCCAGGC
AGCGGTATTCTCTGCCTTGAGCTGCTCCGCCAATCGAGCTCTCCCGAAAC
GTACACCTTAGAACTTCCCCGATCGGACATCATCCAGGACCTCAGTGTAC
TGGTCGCCTTCCTCGACTGGCTCCGCCCCTCGGAATCCGACATCGCAGCC
AAGGCGCAAATCAAGGGAATATTGCAACGCTCATTGGACCGAATTCTCAG
CATGCCGGCATCGCTGCACAGTCCGACGAGAGCCCTGGACGCGCTGCCCG
ACTTTGTAGGCGCAGATCCCCATCTCGACTTGTTAAACACATTCGCGTGG
GTAGATTGGGATGCCGCATTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:1112164..1114364 + |
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