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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:1125238..1127280- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009535-T1 ID=CBS51388_009535-T1|Name=CBS51388_009535-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2043bp|location=Sequence derived from alignment at An15:1125238..1127280- (Aspergillus niger CBS 513.88)
ATGCCCACCGCCTCATCGCCGGCATCAGGGCACTCGCCCTCGGTGTCCAA
GCGACGTAAAATCCGCAAGGGCACCTTCTCCTGTTGGGAGTGCAAGCATC
GGAAGCGACGCTGCGTGTTCGAGCCCCTCAAGGACTCCACTTGTGTCTAT
TGCCAGTCTCGAGGTATCCCCTGCGTCAGCCAGGAACATGCCGATCCACG
AAGCCACAGTAGCGATGGCCAGATATCGGAGCGGATTTGCCACGTCGAAT
CTCTGGTCAACCAATTGATTCGGCAGCGTGACAGCTGTCAGCCTCAGGTC
CAGCCTGTGATCGGGGTTCGCGACCGAGCGAGTTCCCCTCGGCCGAGAGA
AGCATCTATATCATTCCCCTTTCAGCAGCTGTGCAAGTCTCTGGCGGCGT
TATTCCCTCATCCGAACACGACCGCACTCATCTTGACCAAGGGTCGCTTC
TTCAGTCTGCCTTTCGAGACTTGTCGATCCCCACTCCGAGACCAATCGGC
TGTCTGCTCTGGCCTAGCACAGTCTGGAGATGTCTTCAGGCTACCATATT
CTACTTCCCATCCAATCCAATTTGCTCAGAAACTCATACAACTTGCACTC
GGTTTACAGCAGCTGGACCTCGCCTCATGTCTACACCCACAACTGCAGCT
AGAGCAAAAGTGGTCCACAGGCGACTCTGCCCGGCGCTACGTCGATCTGG
CAGTTAGTCATGTAACATCACAGGACGCGCTCGTAGATTCTCTCGATGGT
CTTGACACTCTCTTACTGCAGGCCCGCTATCACCTTAACTCTGGGGAGCT
GCGCTCGGCCTGGCTTATTTTCCGTCGTGCTTTGAGCATCGCTCAACTGA
TCGGACTTCCAAGCCGGAATGAACAAGCCGGCAGCCGCGCGGAATCCCTT
TGGGTTCAGCTTGTATATAATGATCGGTTCTTGTCACTAATGCTTGGGCT
TCCATGCGCGGTGAAGGATCTCGAGCTCCTGAATTGGCAGGCTTTAGATA
CCTACCCACCTCTTAGAAAATTATACCGCATCCATTCTGTCATCGCAGGT
CGGATAATCGTCCGAAATGTGCGTCTGCAGCATTACAATTTGTTGTCCCA
AAGACAGTTGGATACCACGTATGATCATTACGGGGTGACTCGCGGCATAA
ATGATGAACTAAGGAAGAGTGCCCGATCAGTGCCTATTGATTGCTGGAAG
GTCCCTACCTTGAACAATACTTTGTTGGATACGGATAAGATGGACAGGAT
CTCCATGCTTGTTACCCAGATGCACCAATATTATCTCGTGATCCTCCTTC
ATCAACCGTACTTGTTGCTGCAGCTGAGTAACCATACATATTTCAGTCCA
TCAGCAATCTCACCTATACTTCCCGACTACTCATACAGCAGACATGTGGT
CGTCCCTGCAAGCCGTGAAGTACTGAGTCGCTGTCTCGAGTTCCGGAATA
TACGGCCTATTCTCTCTTACCGAGGGCTTGAACATAAAGCCTTCGTCGCA
GCAGTGACCCTGCTCTTGTCTCATATATTGGGACACCGGTCGGGCTCCGA
GAACGTCCTAGAACATCAACGGCCTCAAGACCTGGCCATGATTCAACAGG
CAATTGACACCTTGGACGAACTCTGCACGTCAAATGACCCAAATAGAGAC
TCTGCGATCCAAACAAGAAATTTGTTGAGCAAACTCCTGAGTATTGAGGC
TGAGGCAGCCGACGGTATCATTTACATTTCATGCATTGAAAAGGACAGTG
TTGGTTCAGATGATGCCCTGTGCGGTACTTCTCACCAAGGCCTGAAGTTT
TCCATTCCGTACTTTGGAGTTATCTGCGTTATTCCTGGGCCAGTTCCAAA
TCTGCAAAATGATGGCCTACTCGCAGGGTCCGCACAGGCAACAGGACCAC
AAGGCCTTCTCCCTTCGACACTTACACAACTGGAGTTTGATTGTGGCTTG
AATTCTCAGCTCGCTCTATCGTCTAATCTTCAAGCCGAGATGCAGTTGCT
TTATGACTGGTCACTTGAACCGAACGTCCTCAACGAAGGCTAA back to topCoding sequence (CDS) from alignment at An15:1125238..1127280- >CBS51388_009535-T1 ID=CBS51388_009535-T1|Name=CBS51388_009535-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2043bp|location=Sequence derived from alignment at An15:1125238..1127280- (Aspergillus niger CBS 513.88)
ATGCCCACCGCCTCATCGCCGGCATCAGGGCACTCGCCCTCGGTGTCCAA
GCGACGTAAAATCCGCAAGGGCACCTTCTCCTGTTGGGAGTGCAAGCATC
GGAAGCGACGCTGCGTGTTCGAGCCCCTCAAGGACTCCACTTGTGTCTAT
TGCCAGTCTCGAGGTATCCCCTGCGTCAGCCAGGAACATGCCGATCCACG
AAGCCACAGTAGCGATGGCCAGATATCGGAGCGGATTTGCCACGTCGAAT
CTCTGGTCAACCAATTGATTCGGCAGCGTGACAGCTGTCAGCCTCAGGTC
CAGCCTGTGATCGGGGTTCGCGACCGAGCGAGTTCCCCTCGGCCGAGAGA
AGCATCTATATCATTCCCCTTTCAGCAGCTGTGCAAGTCTCTGGCGGCGT
TATTCCCTCATCCGAACACGACCGCACTCATCTTGACCAAGGGTCGCTTC
TTCAGTCTGCCTTTCGAGACTTGTCGATCCCCACTCCGAGACCAATCGGC
TGTCTGCTCTGGCCTAGCACAGTCTGGAGATGTCTTCAGGCTACCATATT
CTACTTCCCATCCAATCCAATTTGCTCAGAAACTCATACAACTTGCACTC
GGTTTACAGCAGCTGGACCTCGCCTCATGTCTACACCCACAACTGCAGCT
AGAGCAAAAGTGGTCCACAGGCGACTCTGCCCGGCGCTACGTCGATCTGG
CAGTTAGTCATGTAACATCACAGGACGCGCTCGTAGATTCTCTCGATGGT
CTTGACACTCTCTTACTGCAGGCCCGCTATCACCTTAACTCTGGGGAGCT
GCGCTCGGCCTGGCTTATTTTCCGTCGTGCTTTGAGCATCGCTCAACTGA
TCGGACTTCCAAGCCGGAATGAACAAGCCGGCAGCCGCGCGGAATCCCTT
TGGGTTCAGCTTGTATATAATGATCGGTTCTTGTCACTAATGCTTGGGCT
TCCATGCGCGGTGAAGGATCTCGAGCTCCTGAATTGGCAGGCTTTAGATA
CCTACCCACCTCTTAGAAAATTATACCGCATCCATTCTGTCATCGCAGGT
CGGATAATCGTCCGAAATGTGCGTCTGCAGCATTACAATTTGTTGTCCCA
AAGACAGTTGGATACCACGTATGATCATTACGGGGTGACTCGCGGCATAA
ATGATGAACTAAGGAAGAGTGCCCGATCAGTGCCTATTGATTGCTGGAAG
GTCCCTACCTTGAACAATACTTTGTTGGATACGGATAAGATGGACAGGAT
CTCCATGCTTGTTACCCAGATGCACCAATATTATCTCGTGATCCTCCTTC
ATCAACCGTACTTGTTGCTGCAGCTGAGTAACCATACATATTTCAGTCCA
TCAGCAATCTCACCTATACTTCCCGACTACTCATACAGCAGACATGTGGT
CGTCCCTGCAAGCCGTGAAGTACTGAGTCGCTGTCTCGAGTTCCGGAATA
TACGGCCTATTCTCTCTTACCGAGGGCTTGAACATAAAGCCTTCGTCGCA
GCAGTGACCCTGCTCTTGTCTCATATATTGGGACACCGGTCGGGCTCCGA
GAACGTCCTAGAACATCAACGGCCTCAAGACCTGGCCATGATTCAACAGG
CAATTGACACCTTGGACGAACTCTGCACGTCAAATGACCCAAATAGAGAC
TCTGCGATCCAAACAAGAAATTTGTTGAGCAAACTCCTGAGTATTGAGGC
TGAGGCAGCCGACGGTATCATTTACATTTCATGCATTGAAAAGGACAGTG
TTGGTTCAGATGATGCCCTGTGCGGTACTTCTCACCAAGGCCTGAAGTTT
TCCATTCCGTACTTTGGAGTTATCTGCGTTATTCCTGGGCCAGTTCCAAA
TCTGCAAAATGATGGCCTACTCGCAGGGTCCGCACAGGCAACAGGACCAC
AAGGCCTTCTCCCTTCGACACTTACACAACTGGAGTTTGATTGTGGCTTG
AATTCTCAGCTCGCTCTATCGTCTAATCTTCAAGCCGAGATGCAGTTGCT
TTATGACTGGTCACTTGAACCGAACGTCCTCAACGAAGGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:1125238..1127280 - |
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