You are here

CBS51388_009536-T1, CBS51388_009536-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009536-T1
Unique NameCBS51388_009536-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:1127571..1128008-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009536-T1 ID=CBS51388_009536-T1|Name=CBS51388_009536-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=438bp|location=Sequence derived from alignment at An15:1127571..1128008- (Aspergillus niger CBS 513.88)
ATGACTAAAGGCCTGGTAAGTAGGACGGACTTTGCTGTGCCAACGAATTC ATGCTAACAAGACTGGCGCACTCCGAGACTTTTGATATCCGCTACGACAA CGAGCTCGCTCATGAGTACTACGGGGATGGGGACAAGCTCACTAAGCGGT AAGATGAGATGTTAGGCGATATGATTTGCCTGCGCAGTGATAGCTAAACG TGACTCTATAGGCTCCAGGACGTCTATAAAGACAAACACCTGGAGTTCCC CCAGTGTTTCGACTCCACATTGACCACCCCACCCATTCACTTCATGTCGT GCGTCACATCAACCTTATTCTTGCTGGGGCATAGCTGATGATAGCAGGGT CGAGGCGCCTGACGATGTAGATGTGGATGAACTGAAAAATGTGCATGTTC CCCCAGGCTTGAGCGTCGAGATTCTCGACTTCGATTAG
back to top

Coding sequence (CDS) from alignment at An15:1127571..1128008-

>CBS51388_009536-T1 ID=CBS51388_009536-T1|Name=CBS51388_009536-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1056bp|location=Sequence derived from alignment at An15:1127571..1128008- (Aspergillus niger CBS 513.88)
GGTCGAGGCGCCTGACGATGTAGATGTGGATGAACTGAAAAATGTGCATG
TTCCCCCAGGCTTGAGCGTCGAGATTCTCGACTTCGATTAGGCTCCAGGA
CGTCTATAAAGACAAACACCTGGAGTTCCCCCAGTGTTTCGACTCCACAT
TGACCACCCCACCCATTCACTTCATGTCACTTTTGATATCCGCTACGACA
ACGAGCTCGCTCATGAGTACTACGGGGATGGGGACAAGCTCACTAAGCGA
TGACTAAAGGCCTGGGTCGAGGCGCCTGACGATGTAGATGTGGATGAACT
GAAAAATGTGCATGTTCCCCCAGGCTTGAGCGTCGAGATTCTCGACTTCG
ATTAGGCTCCAGGACGTCTATAAAGACAAACACCTGGAGTTCCCCCAGTG
TTTCGACTCCACATTGACCACCCCACCCATTCACTTCATGTCACTTTTGA
TATCCGCTACGACAACGAGCTCGCTCATGAGTACTACGGGGATGGGGACA
AGCTCACTAAGCGATGACTAAAGGCCTGGGTCGAGGCGCCTGACGATGTA
GATGTGGATGAACTGAAAAATGTGCATGTTCCCCCAGGCTTGAGCGTCGA
GATTCTCGACTTCGATTAGGCTCCAGGACGTCTATAAAGACAAACACCTG
GAGTTCCCCCAGTGTTTCGACTCCACATTGACCACCCCACCCATTCACTT
CATGTCACTTTTGATATCCGCTACGACAACGAGCTCGCTCATGAGTACTA
CGGGGATGGGGACAAGCTCACTAAGCGATGACTAAAGGCCTGGGTCGAGG
CGCCTGACGATGTAGATGTGGATGAACTGAAAAATGTGCATGTTCCCCCA
GGCTTGAGCGTCGAGATTCTCGACTTCGATTAGGCTCCAGGACGTCTATA
AAGACAAACACCTGGAGTTCCCCCAGTGTTTCGACTCCACATTGACCACC
CCACCCATTCACTTCATGTCACTTTTGATATCCGCTACGACAACGAGCTC
GCTCATGAGTACTACGGGGATGGGGACAAGCTCACTAAGCGATGACTAAA
GGCCTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009536CBS51388_009536Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009536-T1CBS51388_009536-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009536-T1.cdsCBS51388_009536-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009536-T1.exon4CBS51388_009536-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_009536-T1.exon3CBS51388_009536-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009536-T1.exon2CBS51388_009536-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009536-T1.exon1CBS51388_009536-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:1127571..1128008 -