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CBS51388_009581-T1, CBS51388_009581-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009581-T1
Unique NameCBS51388_009581-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:1269909..1271503+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009581-T1 ID=CBS51388_009581-T1|Name=CBS51388_009581-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1595bp|location=Sequence derived from alignment at An15:1269909..1271503+ (Aspergillus niger CBS 513.88)
ATGCAACCATACTTCGGCCTACGCGGCGCTCTTTTGAATCGCGCCATCAT
CTGGCTGGTCGTCTGCCCGGCCTTTGTGTGCTATGGATACAACCAGGGAG
TGACGGGAGGTCTCCTCACGCTGGAGTCGTTTGCGGAGACGTTTCCCCAG
ATGAACACTTTGACCACCACTGGGGCCCAGCAGCACTACAACTCCACCAT
CCAGGGTAAGGCGCCCGCTCCCTCACAACTGCCCTCCCTCTCCCGGTCTA
ACCATCCACAGGTACGGTGGTCGCACTGTACACCGTCGGCGGCATATTCG
GATCCCTGTCATGCATCTACCTCGGTGATCTCCTCGGCCGGCGAAAGGTG
ATCTTTCTCACTTCAGCTATCTCGATAATTGGGGCCCTGCTGATGGCCAC
TTCCTTCGGACTGGCTCAATTCATCGTGGCACGTGTTGTGCTGGGGCTGG
GAACGGGCGGCTATGTTGCAACTGTGCCCGTGTGGCAGGCCGAGATCTCG
CAGGCGGGCAAGCGTGGTGCCCATGTAGTGACGGACGGTATCTTCATTGG
GGCGGGAATCACAATCTCGCTGTGGACTGACTTCGGGTTCTACTTCGTTA
CGGGTAACTCCGTGTCGTGGCGGTTCCCGCTAGCCTTCCAGATCGTCCTG
TCACTCATGGTGATGGCCTTCATCATATTTTTCCCAGAGTCGCCCCGGTG
GCTGATAAAGCGAAACCGGACCGAGGAGGCCCGCGAGATCCTGGCTGCGC
TGGCCGACCTCGATCCGAACGACGAAAGCATCACACTGGCTGTGCGCGAC
ATCGAGCGGTCGCTAGCCCTCTCGGGATCGGGGTCGTGGAAGGACATGCT
GAGCATGGGCGAACAGCGACTCTTCCATCGGACGGTGTTGGCTGCAGCAG
GCCAGATGTTCCAGCAAATGTGCGGAATCAATCTCATCACCTTTTACGCC
ACAACCATTTTCCAACAGTACTTGGGCCTGGATGCCATACCATCACGCAT
TCTGGCTGCCGCCATGTGCCTCACCCAGCCACTGGGTGGATTCCTCGCTT
TCTTCACGATTGACCGGCTCGGTCGGCGAGTCCTGATGCTGTGGAGTGCT
GTGGGCATGTCCGCCTCGATGGCCATCCTGGCGGGAACAACGTCTCGATC
CAACGATACCGCGGCGCTGGTCGTAGCGGTGGTGTTCCTGTTCGTGTTCG
AATTCATCTTCACCGTCGGATACTCGGGTCTGACCTTCCTGTACGCGACG
GAGGTCGCACCGCTGCAACTTCGAGCGGCCATCAGTGCCGTATCAACAGC
GGCCGTGTGGACCTTCAATTTCCTCCTCGCTGAAGTGACCCCGGTGGGCT
TTGATACGATCGGATACCAATATTACATCATCTTCGCGGTGTTGAACGCA
GTGATTGTGCCGATCGTGTACTTCTTCTTCCCGGAGACGAATGGTCGGTC
GCTGGAGGAGATCGACGAAATCTTCCTGCAGTCGAAGAGCGTGTTTGACC
CTCCGCGACTGGCGAGGACATTGCCGCGGATGCATCTGGCAGAGGTGGTG
GATGATCCGGAGGAGGTGGCCGATGCGAAGGTGGGCAAGAGTTGA
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Coding sequence (CDS) from alignment at An15:1269909..1271503+

>CBS51388_009581-T1 ID=CBS51388_009581-T1|Name=CBS51388_009581-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3078bp|location=Sequence derived from alignment at An15:1269909..1271503+ (Aspergillus niger CBS 513.88)
ATGCAACCATACTTCGGCCTACGCGGCGCTCTTTTGAATCGCGCCATCAT
CTGGCTGGTCGTCTGCCCGGCCTTTGTGTGCTATGGATACAACCAGGGAG
TGACGGGAGGTCTCCTCACGCTGGAGTCGTTTGCGGAGACGTTTCCCCAG
ATGAACACTTTGACCACCACTGGGGCCCAGCAGCACTACAACTCCACCAT
CCAGGGTACGGTGGTCGCACTGTACACCGTCGGCGGCATATTCGGATCCC
TGTCATGCATCTACCTCGGTGATCTCCTCGGCCGGCGAAAGGTGATCTTT
CTCACTTCAGCTATCTCGATAATTGGGGCCCTGCTGATGGCCACTTCCTT
CGGACTGGCTCAATTCATCGTGGCACGTGTTGTGCTGGGGCTGGGAACGG
GCGGCTATGTTGCAACTGTGCCCGTGTGGCAGGCCGAGATCTCGCAGGCG
GGCAAGCGTGGTGCCCATGTAGTGACGGACGGTATCTTCATTGGGGCGGG
AATCACAATCTCGCTGTGGACTGACTTCGGGTTCTACTTCGTTACGGGTA
ACTCCGTGTCGTGGCGGTTCCCGCTAGCCTTCCAGATCGTCCTGTCACTC
ATGGTGATGGCCTTCATCATATTTTTCCCAGAGTCGCCCCGGTGGCTGAT
AAAGCGAAACCGGACCGAGGAGGCCCGCGAGATCCTGGCTGCGCTGGCCG
ACCTCGATCCGAACGACGAAAGCATCACACTGGCTGTGCGCGACATCGAG
CGGTCGCTAGCCCTCTCGGGATCGGGGTCGTGGAAGGACATGCTGAGCAT
GGGCGAACAGCGACTCTTCCATCGGACGGTGTTGGCTGCAGCAGGCCAGA
TGTTCCAGCAAATGTGCGGAATCAATCTCATCACCTTTTACGCCACAACC
ATTTTCCAACAGTACTTGGGCCTGGATGCCATACCATCACGCATTCTGGC
TGCCGCCATGTGCCTCACCCAGCCACTGGGTGGATTCCTCGCTTTCTTCA
CGATTGACCGGCTCGGTCGGCGAGTCCTGATGCTGTGGAGTGCTGTGGGC
ATGTCCGCCTCGATGGCCATCCTGGCGGGAACAACGTCTCGATCCAACGA
TACCGCGGCGCTGGTCGTAGCGGTGGTGTTCCTGTTCGTGTTCGAATTCA
TCTTCACCGTCGGATACTCGGGTCTGACCTTCCTGTACGCGACGGAGGTC
GCACCGCTGCAACTTCGAGCGGCCATCAGTGCCGTATCAACAGCGGCCGT
GTGGACCTTCAATTTCCTCCTCGCTGAAGTGACCCCGGTGGGCTTTGATA
CGATCGGATACCAATATTACATCATCTTCGCGGTGTTGAACGCAGTGATT
GTGCCGATCGTGTACTTCTTCTTCCCGGAGACGAATGGTCGGTCGCTGGA
GGAGATCGACGAAATCTTCCTGCAGTCGAAGAGCGTGTTTGACCCTCCGC
GACTGGCGAGGACATTGCCGCGGATGCATCTGGCAGAGGTGGTGGATGAT
CCGGAGGAGGTGGCCGATGCGAAGGTGGGCAAGAGTTGAATGCAACCATA
CTTCGGCCTACGCGGCGCTCTTTTGAATCGCGCCATCATCTGGCTGGTCG
TCTGCCCGGCCTTTGTGTGCTATGGATACAACCAGGGAGTGACGGGAGGT
CTCCTCACGCTGGAGTCGTTTGCGGAGACGTTTCCCCAGATGAACACTTT
GACCACCACTGGGGCCCAGCAGCACTACAACTCCACCATCCAGGGTACGG
TGGTCGCACTGTACACCGTCGGCGGCATATTCGGATCCCTGTCATGCATC
TACCTCGGTGATCTCCTCGGCCGGCGAAAGGTGATCTTTCTCACTTCAGC
TATCTCGATAATTGGGGCCCTGCTGATGGCCACTTCCTTCGGACTGGCTC
AATTCATCGTGGCACGTGTTGTGCTGGGGCTGGGAACGGGCGGCTATGTT
GCAACTGTGCCCGTGTGGCAGGCCGAGATCTCGCAGGCGGGCAAGCGTGG
TGCCCATGTAGTGACGGACGGTATCTTCATTGGGGCGGGAATCACAATCT
CGCTGTGGACTGACTTCGGGTTCTACTTCGTTACGGGTAACTCCGTGTCG
TGGCGGTTCCCGCTAGCCTTCCAGATCGTCCTGTCACTCATGGTGATGGC
CTTCATCATATTTTTCCCAGAGTCGCCCCGGTGGCTGATAAAGCGAAACC
GGACCGAGGAGGCCCGCGAGATCCTGGCTGCGCTGGCCGACCTCGATCCG
AACGACGAAAGCATCACACTGGCTGTGCGCGACATCGAGCGGTCGCTAGC
CCTCTCGGGATCGGGGTCGTGGAAGGACATGCTGAGCATGGGCGAACAGC
GACTCTTCCATCGGACGGTGTTGGCTGCAGCAGGCCAGATGTTCCAGCAA
ATGTGCGGAATCAATCTCATCACCTTTTACGCCACAACCATTTTCCAACA
GTACTTGGGCCTGGATGCCATACCATCACGCATTCTGGCTGCCGCCATGT
GCCTCACCCAGCCACTGGGTGGATTCCTCGCTTTCTTCACGATTGACCGG
CTCGGTCGGCGAGTCCTGATGCTGTGGAGTGCTGTGGGCATGTCCGCCTC
GATGGCCATCCTGGCGGGAACAACGTCTCGATCCAACGATACCGCGGCGC
TGGTCGTAGCGGTGGTGTTCCTGTTCGTGTTCGAATTCATCTTCACCGTC
GGATACTCGGGTCTGACCTTCCTGTACGCGACGGAGGTCGCACCGCTGCA
ACTTCGAGCGGCCATCAGTGCCGTATCAACAGCGGCCGTGTGGACCTTCA
ATTTCCTCCTCGCTGAAGTGACCCCGGTGGGCTTTGATACGATCGGATAC
CAATATTACATCATCTTCGCGGTGTTGAACGCAGTGATTGTGCCGATCGT
GTACTTCTTCTTCCCGGAGACGAATGGTCGGTCGCTGGAGGAGATCGACG
AAATCTTCCTGCAGTCGAAGAGCGTGTTTGACCCTCCGCGACTGGCGAGG
ACATTGCCGCGGATGCATCTGGCAGAGGTGGTGGATGATCCGGAGGAGGT
GGCCGATGCGAAGGTGGGCAAGAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009581CBS51388_009581Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009581-T1.exon1CBS51388_009581-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009581-T1.exon2CBS51388_009581-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009581-T1.cdsCBS51388_009581-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009581-T1CBS51388_009581-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:1269909..1271503 +
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