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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:1323524..1325603- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009603-T1 ID=CBS51388_009603-T1|Name=CBS51388_009603-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2080bp|location=Sequence derived from alignment at An15:1323524..1325603- (Aspergillus niger CBS 513.88)
ATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGTATGTCTTGTTCTT
ATATTACTAACTGGCCCTTTCACCTATCTATCCCTTCAGTCAAACCCCCA
AAGGTCATTTAATGTTTCCCCTCCGCAGAGATCCTTCCCCGCACCTCATC
TCAAACCAACTCCAACTCACATATCTTCACCTCCAATAGCGTCACCGACC
TCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTG
CAATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCG
CTTCGTAAGTCCGCTTCATCTCCCCCATCCTATAGATTCTCTGAACGGGA
AACTTACTCTGTATCCAGGAACAACATGAAATCCCCGGTAGTAGGGGCGA
GGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGGTGGGTTGACTTCTCC
TTTCTAACTTCATTCTCGCAACTGAGAATACTGAAACATCGGGATGATGT
GTAAACTAATATTGATTGGTACTAGAAAACCCACTCTGCCTCTATCACTG
CCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTG
ATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGT
AAGTGGTTAAATCGTCCTTTTCTTTTTCTTTCTCCTTCTTTTGAGACTTT
TGTGGTTCTTTACAGTGCTCTTTGTTGGGTTACCAAGGGATAGCAGCAGC
TAACGACTTATCAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACT
CCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGA
GAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGGTCGGAA
GGGCATAAGGGACGGAAATCACAAGTGTTTCTTGTATTATCATTTAATGA
GAAATGGAGTGTAGTTTAGCCTGTGTAAGCGACGATAGAGCCTAAGATTT
CTTTGATGCTGTGTATGGCTGTACAGGATTAGGATGGGGATGGAAAACTA
TGCCTATTTTAAACCACCTGATCTGAACAAGGTTTCAGGCCCGGATATTG
CCATATACAGCGAAATACCACCTCCAGAGAGAGAAAGAGAGCAACTGACC
CGGTGGGTGCACATTGAAGCTGATGAAATGCGGAGCGATATTGCAGTACT
CACAAGGCGGTGTCTTTGTGCAGCTTGTGATTGGGTGATACCCGCGTCTG
GCGGCATCACATTTTCGCGGACGGCATCAGCTCCGTCAAGTTGGCTCTGC
GATCTCCGATAGACTGCCCAGCTCTTTTACAGCACGCGATCAACTCAATT
TCACCTGGACGTGGAGACGGTCATTTTTTATTTCCATCATTACACGATTC
CTTTGGCGCGTCCATCTCCATCGACATCCATATTTTGCAAACTCCTGCTG
AGCAGCTGGCATTGATTTCAGACCACCAACCATGAGTGTTCGTACTCTCC
TATCCCTACTCCATTGACTCAAGCTTTATCTTCAGGCGTACACTTTTGTT
AATAAGGAGTAAACTGACTCTGCGAATCTAGTTCAACCCTGTCAACCCCC
GGCCTTTCCTCCAGGCTAGGTACGCACCCGGTCCCTTGTCGCTTGATCGC
CCCGCCGCAATCCTATCCTATAACTTCCAATTTCTATTGAAAAATATCCT
CTAATTCAAATCGCAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGG
GGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAA
CGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAA
CATTGGGTCTGGTCCTGATTAGGTGCGTTTACTCGGTCGCCTGATATCTC
GGGGGCTGGGGTTTCCTGATAGCAGTGCTGGGATCTGCGCATCCGTTACC
CCTCTTCGGAGATACACTTGGACGCATATTGGAAGGACATTTGCTAACGC
AATACGCTGATAGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGT
GTGGAAATGACGGACCTGGGACTACGATAG back to topCoding sequence (CDS) from alignment at An15:1323524..1325603- >CBS51388_009603-T1 ID=CBS51388_009603-T1|Name=CBS51388_009603-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5832bp|location=Sequence derived from alignment at An15:1323524..1325603- (Aspergillus niger CBS 513.88)
GTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGG
ACCTGGGACTACGATAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTG
GGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGA
ACGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGA
ACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCCGGCCTTTC
CTCCAGGCTAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCT
TTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAA
GGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGAAAACCCACT
CTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGC
ACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTACCGA
GTTTAAGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGA
ACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCCCAA
GGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCACCT
CTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCATGCTT
TCCCTCCTCCTGTCTGCCGAACTCAGCGGGTGTAACAACATCCTCTGGAT
GGGCTCTGCGGACAGTGTGGAAATGACGGACCTGGGACTACGATAGAGTC
GGTACCGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGG
CAAGCTTGAGAGCATCGATTCGTACATGAACGTGCTGCTCCGTGATACGG
AAGAGTTCATTGATGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATT
AGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGGGTGAGTGGG
AAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCA
GAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGAT
CAAGGAGATCAACTTTCAGAAAACCCACTCTGCCTCTATCACTGCCGGCC
CCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAG
ATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGAACAACA
TGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGC
TGTGCCAGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTA
CTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCCA
ACTGGGTCAGCTTCAACCGCTTCATGCTTTCCCTCCTCCTGTCTGCCGAA
CTCAGCGGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGA
AATGACGGACCTGGGACTACGATAGAGTCGGTACCGAGCTCATCATCCGT
CTGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTC
GTACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGA
ACACGGGAACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCC
GGCCTTTCCTCCAGGCTAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTT
CTACTCCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTAC
GATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGAA
AACCCACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATG
AGAAGCGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAA
TTTACCGAGTTTAAGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGG
CGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTC
CGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCA
ATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCT
TCATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGTGTAACAACATC
CTCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGGACCTGGGACTACG
ATAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGGAA
TACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAACGTGCTGCTCCG
TGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAACATTGGGTCTGG
TCCTGATTAGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGGG
TGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTG
ATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAG
GTTTCGATCAAGGAGATCAACTTTCAGAAAACCCACTCTGCCTCTATCAC
TGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGG
TGATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGAT
GAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAA
ATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAA
GAGCCCTACTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAAC
CCACCCCAACTGGGTCAGCTTCAACCGCTTCATGCTTTCCCTCCTCCTGT
CTGCCGAACTCAGCGGGTGTAACAACATCCTCTGGATGGGCTCTGCGGAC
AGTGTGGAAATGACGGACCTGGGACTACGATAGAGTCGGTACCGAGCTCA
TCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGC
ATCGATTCGTACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGA
TGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGTTCAACCCTGT
CAACCCCCGGCCTTTCCTCCAGGCTAGGGTGAGTGGGAAGCGAAGGGAGC
TGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGT
ATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAAC
TTTCAGAAAACCCACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGA
GGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAG
GATTGGAATTTACCGAGTTTAAGGCTGATGAACAACATGAAATCCCCGGT
AGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCA
CCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTC
AAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTT
CAACCGCTTCATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGTGTA
ACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGGACCTG
GGACTACGATAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGGGGCC
AAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAACGTG
CTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAACATT
GGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCA
GGCTAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCAC
CGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGG
GAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGAAAACCCACTCTGCC
TCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGC
GAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTA
AGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTT
GTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCCCAAGGACA
CCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCACCTCTTGT
CGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCATGCTTTCCCT
CCTCCTGTCTGCCGAACTCAGCGGGTGTAACAACATCCTCTGGATGGGCT
CTGCGGACAGTGTGGAAATGACGGACCTGGGACTACGATAGAGTCGGTAC
CGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAAGC
TTGAGAGCATCGATTCGTACATGAACGTGCTGCTCCGTGATACGGAAGAG
TTCATTGATGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGTTC
AACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGGGTGAGTGGGAAGCG
AAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAGAGGA
AGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGG
AGATCAACTTTCAGAAAACCCACTCTGCCTCTATCACTGCCGGCCCCAAC
GTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATTGA
CTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGAACAACATGAAA
TCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGC
CAGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACT
TCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCCAACTGG
GTCAGCTTCAACCGCTTCATGCTTTCCCTCCTCCTGTCTGCCGAACTCAG
CGGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGAAATGA
CGGACCTGGGACTACGATAGAGTCGGTACCGAGCTCATCATCCGTCTGAA
GTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACA
TGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACG
GGAACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCCGGCCT
TTCCTCCAGGCTAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACT
CCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGA
GAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGAAAACCC
ACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAG
CGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTAC
CGAGTTTAAGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGGCGAGG
CGAACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCC
CAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCA
CCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCATG
CTTTCCCTCCTCCTGTCTGCCGAACTCAGCGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000387 | spliceosomal snRNP assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264X31 |
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR034100 |
| DBxref | InterPro:IPR008584 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| DBxref | PFAM:PF05907 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:1323524..1325603 - |
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