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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:1340127..1341280+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009609-T1 ID=CBS51388_009609-T1|Name=CBS51388_009609-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1154bp|location=Sequence derived from alignment at An15:1340127..1341280+ (Aspergillus niger CBS 513.88)
ATGGGTTTATCCCGTCTCCTCCGCATCCCGCGGCCAGAGGTATGTTCCAA
TATTACAAAACCCCCGTTGTTTAATTGAAAAAATTAGGATGGGAACCAGA
CCCTGTTTGGACCCCCGTTGCCCGGTCGCGCGCTGAAATGAGGCTAACCA
TCGCATCCCGGCTTTCCGGTGACCTCACACAGACTTTCCTCTATGTCATG
AGTCTCCAGACAGGAGCTTCCTTGATCACTCTCTCCTTACTCCTCAATAA
AATCAGCGGACTTTATGGCTTGCTCGCCCTGTTGACCGGTTACCACCTCT
CTCCGGTGCAGCTGTCCATGTACATTTACTCCCTCCTCGCGCTCGGTCTC
GCAACTCTGCTCTTCCCGCACATCCGGAAACAAACGCCGCTACAATGTCT
CGCGCTCGCTTGGCTCTATGTCTTCGACAGCCTAATAAATGCCGCCTATA
CTGCAGCTTTCGGTGTGACCTGGTTCCTGGTTGTGTCTCAGCATTACGAC
AACGGCAACGCCTCGGGACCGGGTGGTGAGACCATCGCCCAGACCGCTGG
CTTCACCAGCCCCAAGTATGACACCACCAAAACAGAGAGCGGTCCCTACG
CAAGGAGGCCGGATGCGCTCGGGAACGCTGTGGCACAACCTGAAAGCTTC
CAAAGCATCCTGGTCATTTGCTGTCTCTGGGTCATTCGTGCTTACTTCGT
CTTCGTTATGCTCGCTTTTGCTCGTCAGGCACTCCGCCTCTACGTCGCCG
TGCCTCGCCACACCCAACTCCCCACTCACAGCCGTAATACCTCCATCGCG
AGCGTCGCCAGTGTTGCGGACATCGACCGGGAGCCCTTCTCCCCGTATAG
TCCCGATGGCCAAGGTTGGCAGGGAAAGCTTGGGCGCATCATGATCAGCA
TCGGTCGCAACTACTGGCTCGGCGAGGATGAGGAAGGCGGAAACTGGATG
GCCACCCTTGGCCGCCGTTTCCGGGCTCGTGCTGAAGACAACGAACTCCC
CGGCCCCCTCGAGCGGGAGAGGAGACGTCGCTCTGGAACCGGACCTCCCC
AGCCCTCCCAGTCCGCCTTTCAGGCTGTAGCCTTGCAACAACCGATCCAT
GAACAGGTCCCGGGAATGAACGTGAAGATGCACGGCTGGACCGAAAGCAG
GTAA back to topCoding sequence (CDS) from alignment at An15:1340127..1341280+ >CBS51388_009609-T1 ID=CBS51388_009609-T1|Name=CBS51388_009609-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2022bp|location=Sequence derived from alignment at An15:1340127..1341280+ (Aspergillus niger CBS 513.88)
ATGGGTTTATCCCGTCTCCTCCGCATCCCGCGGCCAGAGACTTTCCTCTA
TGTCATGAGTCTCCAGACAGGAGCTTCCTTGATCACTCTCTCCTTACTCC
TCAATAAAATCAGCGGACTTTATGGCTTGCTCGCCCTGTTGACCGGTTAC
CACCTCTCTCCGGTGCAGCTGTCCATGTACATTTACTCCCTCCTCGCGCT
CGGTCTCGCAACTCTGCTCTTCCCGCACATCCGGAAACAAACGCCGCTAC
AATGTCTCGCGCTCGCTTGGCTCTATGTCTTCGACAGCCTAATAAATGCC
GCCTATACTGCAGCTTTCGGTGTGACCTGGTTCCTGGTTGTGTCTCAGCA
TTACGACAACGGCAACGCCTCGGGACCGGGTGGTGAGACCATCGCCCAGA
CCGCTGGCTTCACCAGCCCCAAGTATGACACCACCAAAACAGAGAGCGGT
CCCTACGCAAGGAGGCCGGATGCGCTCGGGAACGCTGTGGCACAACCTGA
AAGCTTCCAAAGCATCCTGGTCATTTGCTGTCTCTGGGTCATTCGTGCTT
ACTTCGTCTTCGTTATGCTCGCTTTTGCTCGTCAGGCACTCCGCCTCTAC
GTCGCCGTGCCTCGCCACACCCAACTCCCCACTCACAGCCGTAATACCTC
CATCGCGAGCGTCGCCAGTGTTGCGGACATCGACCGGGAGCCCTTCTCCC
CGTATAGTCCCGATGGCCAAGGTTGGCAGGGAAAGCTTGGGCGCATCATG
ATCAGCATCGGTCGCAACTACTGGCTCGGCGAGGATGAGGAAGGCGGAAA
CTGGATGGCCACCCTTGGCCGCCGTTTCCGGGCTCGTGCTGAAGACAACG
AACTCCCCGGCCCCCTCGAGCGGGAGAGGAGACGTCGCTCTGGAACCGGA
CCTCCCCAGCCCTCCCAGTCCGCCTTTCAGGCTGTAGCCTTGCAACAACC
GATCCATGAACAGGTCCCGGGAATGAACGTGAAGATGCACGGCTGGACCG
AAAGCAGGTAAATGGGTTTATCCCGTCTCCTCCGCATCCCGCGGCCAGAG
ACTTTCCTCTATGTCATGAGTCTCCAGACAGGAGCTTCCTTGATCACTCT
CTCCTTACTCCTCAATAAAATCAGCGGACTTTATGGCTTGCTCGCCCTGT
TGACCGGTTACCACCTCTCTCCGGTGCAGCTGTCCATGTACATTTACTCC
CTCCTCGCGCTCGGTCTCGCAACTCTGCTCTTCCCGCACATCCGGAAACA
AACGCCGCTACAATGTCTCGCGCTCGCTTGGCTCTATGTCTTCGACAGCC
TAATAAATGCCGCCTATACTGCAGCTTTCGGTGTGACCTGGTTCCTGGTT
GTGTCTCAGCATTACGACAACGGCAACGCCTCGGGACCGGGTGGTGAGAC
CATCGCCCAGACCGCTGGCTTCACCAGCCCCAAGTATGACACCACCAAAA
CAGAGAGCGGTCCCTACGCAAGGAGGCCGGATGCGCTCGGGAACGCTGTG
GCACAACCTGAAAGCTTCCAAAGCATCCTGGTCATTTGCTGTCTCTGGGT
CATTCGTGCTTACTTCGTCTTCGTTATGCTCGCTTTTGCTCGTCAGGCAC
TCCGCCTCTACGTCGCCGTGCCTCGCCACACCCAACTCCCCACTCACAGC
CGTAATACCTCCATCGCGAGCGTCGCCAGTGTTGCGGACATCGACCGGGA
GCCCTTCTCCCCGTATAGTCCCGATGGCCAAGGTTGGCAGGGAAAGCTTG
GGCGCATCATGATCAGCATCGGTCGCAACTACTGGCTCGGCGAGGATGAG
GAAGGCGGAAACTGGATGGCCACCCTTGGCCGCCGTTTCCGGGCTCGTGC
TGAAGACAACGAACTCCCCGGCCCCCTCGAGCGGGAGAGGAGACGTCGCT
CTGGAACCGGACCTCCCCAGCCCTCCCAGTCCGCCTTTCAGGCTGTAGCC
TTGCAACAACCGATCCATGAACAGGTCCCGGGAATGAACGTGAAGATGCA
CGGCTGGACCGAAAGCAGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006673 | inositol phosphoceramide metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0070917 | inositol phosphoceramide synthase regulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013862 |
| DBxref | PFAM:PF08552 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:1340127..1341280 + |
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