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CBS51388_009652-T1, CBS51388_009652-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009652-T1
Unique NameCBS51388_009652-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:1470727..1471822-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009652-T1 ID=CBS51388_009652-T1|Name=CBS51388_009652-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1096bp|location=Sequence derived from alignment at An15:1470727..1471822- (Aspergillus niger CBS 513.88)
ATGGCACCTTCTCTGGAGGAGCCGACCGCTGCCTACCTTGAGGCGCGGTC
GAAGATGGCCCCGAATCTGGTGGCTCCTGAGCCAGGTATGTCCGATATGA
AGCCGGGATATCTGCTTAGGATATGATTAGTGTACTAATCTCTGAGAAGA
ACATTGTCCTGGTCCCGAGTCCGAACAAGCAGGCAAAGGCGATGCCTGTG
CAGGGTGTCCCAATCAATCGATCTGCGCATCTGCCCCCAAAGGTCCTGAC
CCCGATATCCCCATCATCACCGAACGGCTATCGCAAATACGACACAAAAT
CCTTGTACTCTCTGGCAAAGGCGGTGTCGGAAAATCTACTTTCACCTCCC
TTCTCTCCCACGCATTCGCCGCAAATCCTGAATCGACTGTGGGTGTAATG
GATACCGATATCTGCGGGCCGTCGATACCGAAAATGATGGGCGTCGAGGC
GGAGACCATCCACGTGAGCAATGCAGGCTGGAGTCCGGTGTGGGTTACGG
ATAATTTAGCCACGATGAGCGTGCAATTCATGCTGCCCAATCGGGATGAT
GCGGTGATCTGGAGAGGGCCGAAGAAGAACGGACTCATTAAACAATTCTT
GAAGGATGTGGATTGGGGCGAGATGGATTACTTGGTCATTGATACACCCC
CGGGGACATCGGACGAGCATCTGTCCGTCAACTCTCTGCTCAAGGAGTCC
GGTGTAGATGGCGCAGTAGTTGTCACTACCCCACAGGAGGTCTCGTTGCT
CGACGTCAGGAAGGAAATAGACTTTTGCCGCAAGGCAGGCATTCGCATCC
TGGGGCTAGTCGAGAACATGTCTGGCTTCGTGTGCCAATCGTGCAACACT
GAGACCCAGATCTTCCGGGCTACCACCGGGGGCGGAAAGCGACTCGCCAA
GAAGATGGGCATTCCTTTCCTGGGCGCTGTGCCTCTTGACCCGCGGGTAG
GCATGGCATGTGACTATGGTGAGAGCTTCGTGGATCATTATCCCGACAGC
CCAGCATCGATTGCGATCAAGCAAGTTGTCCGCTCGGTTGCTGGGATGAT
TGGAGAGGATCCCAACGACGTGCTGCCGGAGGATGCGGCAGAGTGA
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Coding sequence (CDS) from alignment at An15:1470727..1471822-

>CBS51388_009652-T1 ID=CBS51388_009652-T1|Name=CBS51388_009652-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2064bp|location=Sequence derived from alignment at An15:1470727..1471822- (Aspergillus niger CBS 513.88)
AACATTGTCCTGGTCCCGAGTCCGAACAAGCAGGCAAAGGCGATGCCTGT
GCAGGGTGTCCCAATCAATCGATCTGCGCATCTGCCCCCAAAGGTCCTGA
CCCCGATATCCCCATCATCACCGAACGGCTATCGCAAATACGACACAAAA
TCCTTGTACTCTCTGGCAAAGGCGGTGTCGGAAAATCTACTTTCACCTCC
CTTCTCTCCCACGCATTCGCCGCAAATCCTGAATCGACTGTGGGTGTAAT
GGATACCGATATCTGCGGGCCGTCGATACCGAAAATGATGGGCGTCGAGG
CGGAGACCATCCACGTGAGCAATGCAGGCTGGAGTCCGGTGTGGGTTACG
GATAATTTAGCCACGATGAGCGTGCAATTCATGCTGCCCAATCGGGATGA
TGCGGTGATCTGGAGAGGGCCGAAGAAGAACGGACTCATTAAACAATTCT
TGAAGGATGTGGATTGGGGCGAGATGGATTACTTGGTCATTGATACACCC
CCGGGGACATCGGACGAGCATCTGTCCGTCAACTCTCTGCTCAAGGAGTC
CGGTGTAGATGGCGCAGTAGTTGTCACTACCCCACAGGAGGTCTCGTTGC
TCGACGTCAGGAAGGAAATAGACTTTTGCCGCAAGGCAGGCATTCGCATC
CTGGGGCTAGTCGAGAACATGTCTGGCTTCGTGTGCCAATCGTGCAACAC
TGAGACCCAGATCTTCCGGGCTACCACCGGGGGCGGAAAGCGACTCGCCA
AGAAGATGGGCATTCCTTTCCTGGGCGCTGTGCCTCTTGACCCGCGGGTA
GGCATGGCATGTGACTATGGTGAGAGCTTCGTGGATCATTATCCCGACAG
CCCAGCATCGATTGCGATCAAGCAAGTTGTCCGCTCGGTTGCTGGGATGA
TTGGAGAGGATCCCAACGACGTGCTGCCGGAGGATGCGGCAGAGTGAATG
GCACCTTCTCTGGAGGAGCCGACCGCTGCCTACCTTGAGGCGCGGTCGAA
GATGGCCCCGAATCTGGTGGCTCCTGAGCCAGAACATTGTCCTGGTCCCG
AGTCCGAACAAGCAGGCAAAGGCGATGCCTGTGCAGGGTGTCCCAATCAA
TCGATCTGCGCATCTGCCCCCAAAGGTCCTGACCCCGATATCCCCATCAT
CACCGAACGGCTATCGCAAATACGACACAAAATCCTTGTACTCTCTGGCA
AAGGCGGTGTCGGAAAATCTACTTTCACCTCCCTTCTCTCCCACGCATTC
GCCGCAAATCCTGAATCGACTGTGGGTGTAATGGATACCGATATCTGCGG
GCCGTCGATACCGAAAATGATGGGCGTCGAGGCGGAGACCATCCACGTGA
GCAATGCAGGCTGGAGTCCGGTGTGGGTTACGGATAATTTAGCCACGATG
AGCGTGCAATTCATGCTGCCCAATCGGGATGATGCGGTGATCTGGAGAGG
GCCGAAGAAGAACGGACTCATTAAACAATTCTTGAAGGATGTGGATTGGG
GCGAGATGGATTACTTGGTCATTGATACACCCCCGGGGACATCGGACGAG
CATCTGTCCGTCAACTCTCTGCTCAAGGAGTCCGGTGTAGATGGCGCAGT
AGTTGTCACTACCCCACAGGAGGTCTCGTTGCTCGACGTCAGGAAGGAAA
TAGACTTTTGCCGCAAGGCAGGCATTCGCATCCTGGGGCTAGTCGAGAAC
ATGTCTGGCTTCGTGTGCCAATCGTGCAACACTGAGACCCAGATCTTCCG
GGCTACCACCGGGGGCGGAAAGCGACTCGCCAAGAAGATGGGCATTCCTT
TCCTGGGCGCTGTGCCTCTTGACCCGCGGGTAGGCATGGCATGTGACTAT
GGTGAGAGCTTCGTGGATCATTATCCCGACAGCCCAGCATCGATTGCGAT
CAAGCAAGTTGTCCGCTCGGTTGCTGGGATGATTGGAGAGGATCCCAACG
ACGTGCTGCCGGAGGATGCGGCAGAGTGAATGGCACCTTCTCTGGAGGAG
CCGACCGCTGCCTACCTTGAGGCGCGGTCGAAGATGGCCCCGAATCTGGT
GGCTCCTGAGCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NBP35CBS51388_009652Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009652-T1CBS51388_009652-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009652-T1.cdsCBS51388_009652-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009652-T1.exon2CBS51388_009652-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009652-T1.exon1CBS51388_009652-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR028601
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR000808
DBxrefInterPro:IPR033756
DBxrefPFAM:PF10609
DBxrefPFAM:PF01656
Productcytosolic Fe-S cluster assembly factor nbp35
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:1470727..1471822 -
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