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CBS51388_009678-T1, CBS51388_009678-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009678-T1
Unique NameCBS51388_009678-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:1568078..1569541-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009678-T1 ID=CBS51388_009678-T1|Name=CBS51388_009678-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1464bp|location=Sequence derived from alignment at An15:1568078..1569541- (Aspergillus niger CBS 513.88)
ATGCAGGCTGCCCAGCAGTCCTGGGGTACGTCCATCCCCAACCCCATCCC
CACCCCCACTCCATCTCACAGCACTCTAACCCCATAACCACAGAATTCGA
AAATGCCGTCACCCTCATAGACCCCCACCGAGACGCGCTCTACAAATACG
ATGAAGAGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTCCAAAGAC
CCACACTACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCCTCAAGAT
GGTAATGCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGCCTAATGC
AAGGCTATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTTCCGACTT
CCCGTAGAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAGCCAACGA
ATACATGGTCTCATACCTACAGTCGTGCCGGGATGCAGGACGGATGGAAA
ATGCAGTGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTGGTTATCG
GGCATTGATGTGACGACGCAGGATATGCAGCAGCTCGGGGGACCGTTTGT
GGCGGTGGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAGGTGGATA
TTGGGGCATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAAAGGGGAG
GGGGGTAGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGTTGAACAA
GGCGGAGGACTTTGGGGCACATGCGTCACATTATTATTCGCTGGAGGTGT
CGGTGTTTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCTGTGGAAT
AAGTATTGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGACGAGGGA
TTATGGGAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAGCGGGCCA
CGAGGGGCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCAAGTTAAG
GATCCGCAGTTGGAGAGGGTGGCGAGGGATGGGCAGCGGATTGTCTCGGA
AGAAGTGAAGGGTTTGTTGGCGGCGGAAGTGAAGATGAAGCTGTTTCAAA
ATGTTGGGGAGGGGAATAGATCGGAGAAATCATGAGCTTGTGCTCAACTT
CTGTTCTTATGAAAGGCTTATGAAGGTTCATTTGAGAACAACTCTACTAT
GAATGACGAGATGACTTAATGGATACATTTGCTGCTTCTTTCTTTTTGTT
GTCTACTCAGTAGCAATTTGTGCTATCATTGTATTTGGTCGTATTACGTC
TCGTTACCGCTATTCCTGTGCACTGATGACCATTGATGCATGTAATATGT
GCTTTAATATGTACTAACACACTGCAGCAGGTGTATATGTCCATAGGAGA
ACAGATCAGCACAAGGGGACGACAAGAGGGGTAATCATGAATGAAAATGC
CCAAAGCAAAGACCAATCCGTCAATAGTAGCCTGCGTCGTGATAAATCAT
CATCCGAACCGTAA
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Coding sequence (CDS) from alignment at An15:1568078..1569541-

>CBS51388_009678-T1 ID=CBS51388_009678-T1|Name=CBS51388_009678-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3240bp|location=Sequence derived from alignment at An15:1568078..1569541- (Aspergillus niger CBS 513.88)
CAGGTGTATATGTCCATAGGAGAACAGATCAGCACAAGGGGACGACAAGA
GGGGTAATCATGAATGAAAATGCCCAAAGCAAAGACCAATCCGTCAATAG
TAGCCTGCGTCGTGATAAATCATCATCCGAACCGTAAAATTCGAAAATGC
CGTCACCCTCATAGACCCCCACCGAGACGCGCTCTACAAATACGATGAAG
AGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTCCAAAGACCCACAC
TACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCCTCAAGATGGTAAT
GCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGCCTAATGCAAGGCT
ATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTTCCGACTTCCCGTA
GAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAGCCAACGAATACAT
GGTCTCATACCTACAGTCGTGCCGGGATGCAGGACGGATGGAAAATGCAG
TGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTGGTTATCGGGCATT
GATGTGACGACGCAGGATATGCAGCAGCTCGGGGGACCGTTTGTGGCGGT
GGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAGGTGGATATTGGGG
CATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAAAGGGGAGGGGGGT
AGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGTTGAACAAGGCGGA
GGACTTTGGGGCACATGCGTCACATTATTATTCGCTGGAGGTGTCGGTGT
TTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCTGTGGAATAAGTAT
TGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGACGAGGGATTATGG
GAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAGCGGGCCACGAGGG
GCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCAAGTTAAGGATCCG
CAGTTGGAGAGGGTGGCGAGGGATGGGCAGCGGATTGTCTCGGAAGAAGT
GAAGGATGCAGGCTGCCCAGCAGTCCTGGGCAGGTGTATATGTCCATAGG
AGAACAGATCAGCACAAGGGGACGACAAGAGGGGTAATCATGAATGAAAA
TGCCCAAAGCAAAGACCAATCCGTCAATAGTAGCCTGCGTCGTGATAAAT
CATCATCCGAACCGTAAAATTCGAAAATGCCGTCACCCTCATAGACCCCC
ACCGAGACGCGCTCTACAAATACGATGAAGAGACACACAAAGCTCTTAGC
GCTCAGCGCCCTTGGTCCAAAGACCCACACTACTTCAAATCGATCCGAAT
CTCCGCCGTCGCACTCCTCAAGATGGTAATGCACGCGCGGTCCGGCGGCT
CCCTCGAAGTAATGGGCCTAATGCAAGGCTATGTCCTGCCCGAAACCTTC
GTGGTAACCGACGCCTTCCGACTTCCCGTAGAGGGAACCGAAACGCGAGT
CAACGCCCAAGACGAAGCCAACGAATACATGGTCTCATACCTACAGTCGT
GCCGGGATGCAGGACGGATGGAAAATGCAGTGGGCTGGTACCACAGTCAT
CCCGGGTACGGGTGCTGGTTATCGGGCATTGATGTGACGACGCAGGATAT
GCAGCAGCTCGGGGGACCGTTTGTGGCGGTGGTGGTTGATCCAGAGAGGA
CGATCTCAGCAGGGAAGGTGGATATTGGGGCATTTAGGACGTTTCCGAAG
GATTATACGCCGCCGAAAGGGGAGGGGGGTAGTGGTGCTGGGGAGGATGA
CTATCAGACGGTGCCGTTGAACAAGGCGGAGGACTTTGGGGCACATGCGT
CACATTATTATTCGCTGGAGGTGTCGGTGTTTAAGAGTGCGTTGGATACG
GAGATTCTGTCGTTGCTGTGGAATAAGTATTGGGTTGCGACGTTGAGTCA
GAGTCCGTTGTTTACGACGAGGGATTATGGGAGTAAGCAGATGGTGGATT
TGAGTCAGAAGATTAAGCGGGCCACGAGGGGCGTGGAGAGTAGTGCTTCG
CGAGGGAATCTGGCGCAAGTTAAGGATCCGCAGTTGGAGAGGGTGGCGAG
GGATGGGCAGCGGATTGTCTCGGAAGAAGTGAAGGATGCAGGCTGCCCAG
CAGTCCTGGGCAGGTGTATATGTCCATAGGAGAACAGATCAGCACAAGGG
GACGACAAGAGGGGTAATCATGAATGAAAATGCCCAAAGCAAAGACCAAT
CCGTCAATAGTAGCCTGCGTCGTGATAAATCATCATCCGAACCGTAAAAT
TCGAAAATGCCGTCACCCTCATAGACCCCCACCGAGACGCGCTCTACAAA
TACGATGAAGAGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTCCAA
AGACCCACACTACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCCTCA
AGATGGTAATGCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGCCTA
ATGCAAGGCTATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTTCCG
ACTTCCCGTAGAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAGCCA
ACGAATACATGGTCTCATACCTACAGTCGTGCCGGGATGCAGGACGGATG
GAAAATGCAGTGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTGGTT
ATCGGGCATTGATGTGACGACGCAGGATATGCAGCAGCTCGGGGGACCGT
TTGTGGCGGTGGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAGGTG
GATATTGGGGCATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAAAGG
GGAGGGGGGTAGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGTTGA
ACAAGGCGGAGGACTTTGGGGCACATGCGTCACATTATTATTCGCTGGAG
GTGTCGGTGTTTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCTGTG
GAATAAGTATTGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGACGA
GGGATTATGGGAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAGCGG
GCCACGAGGGGCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCAAGT
TAAGGATCCGCAGTTGGAGAGGGTGGCGAGGGATGGGCAGCGGATTGTCT
CGGAAGAAGTGAAGGATGCAGGCTGCCCAGCAGTCCTGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CSN5CBS51388_009678Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009678-T1CBS51388_009678-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009678-T1.cdsCBS51388_009678-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009678-T1.exon3CBS51388_009678-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009678-T1.exon2CBS51388_009678-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009678-T1.exon1CBS51388_009678-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263RDD
NoteMEROPS:MER0122119
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR040961
DBxrefInterPro:IPR000555
DBxrefPFAM:PF01398
DBxrefPFAM:PF18323
Productproteasome regulatory particle subunit RPN11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:1568078..1569541 -
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