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CBS51388_009736-T1, CBS51388_009736-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009736-T1
Unique NameCBS51388_009736-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:1732221..1733648+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009736-T1 ID=CBS51388_009736-T1|Name=CBS51388_009736-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1428bp|location=Sequence derived from alignment at An15:1732221..1733648+ (Aspergillus niger CBS 513.88)
ATGCCCAGAATCCGACGGATCAAATGCGATGAATCGCCAGGACAATGCAA
CAACTGCGTCTCTGCTAACTGGACGTGCGACGGATACGATGCGTACCGGT
TGCCGCAGCGCCGAGGTCTACAGGATATAGGCACTCGGCTGGGTTGGATG
ATGACGTCGGATGAACACCGTTGTTATTCCTATTTTCAATATCGTTCCGT
TACGAATCTGGCCGGGTTCTTCGACTCCCCACTCTGGCAGCAGTTGGCCC
TACAGATGTCTCGCACTGATCCGGCTGTATTTCATGCGGTGAATATGTTG
AGTGCTGCGCACCAGGAGTCGGAATTGCATAATATGCAGATTTCTGCACG
GTCACGCATTGGGAGCCAGCAGTATTACTTTTCTCTTCAGCAGTCCACGC
GGGCCATCGCGCTCCTGAACCAGCGCCGGAACTCCCAGGATCCCCAGCTG
CGCCAAACCATCCTCCTGTGCTGTCTGCTCTTTGTTCTATTCGATGTGCT
TGTCGCGCAGTATGACAGTGCGTTCACGCATTTACACGGCGGTCTCCGTA
TTCTAAAAGAACTCGAAATCCAAGGGAAGCTGGAGTCGGAGGTTGAGCCA
TCAATAGTTGCCGCATTTCGCCGCCTGGATACACAGGCCTCTCTCTATGA
TACTCGGTTTCCGATCCTAAGCCTGGAGTATGGGAATCAATCCCCGCTTA
AGTTGTTCGAAGCACCAACAGGCGGCTTTACTAGCCTTAGCCAGGTACGA
GAGAAAATCACAGTTCTATTCACAGCGGGTATACCCTTGGTTGCAAGGAG
CTGGAGCCTGAACGGTTCCAACATGGAGACCAACTACGAGTCACTCTACC
AAAGTCAACGGCGATTGCTAGATGCTTTCGCTGAGTTTGACCTACATTTC
ACGTCTTTCCGCGTGACAAAATATCATCAGTTAAGCGAGAAGGAGCAATT
GGGAGCAGATATCACCTACTTGCTTTACCTTGGTCACACTCTCACACTCA
AAACTGTGTTAATTCGTGGACCAGTGCCAGAGTCTCTGGTTCCGGAATTC
CTTGCGCTACTTCAGGCCCATGAAGACATGATCGAGAAGCTCAAGTCCGT
CTCGGGCCTTGTAATGGACCACGTCATGATTGCCCACATGTACCTTGTGG
CCACACAATGCCCAGACGTGGGGATTCGCATACGCGCTATTCGTCTTTTG
CGGTCATGGCCACATTACGAGGGCCTTCACAGCTCCAATGTCACTGCTCT
GATGGCGTTGGGTGCGCTCAAAAGGGACTTTCCCAATGAAGACAAGGCCT
TGTCGATGTTGCAGACGACTGACGCGGAGAATGAATTTCTCGTCGACTCC
TTGGAGTCTATCAAGAATGGCGTGGGAGAACCTACAATTCCGCTTTTCAG
GATGTCTGAGTTGCCGTCACGCCCATGA
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Coding sequence (CDS) from alignment at An15:1732221..1733648+

>CBS51388_009736-T1 ID=CBS51388_009736-T1|Name=CBS51388_009736-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1428bp|location=Sequence derived from alignment at An15:1732221..1733648+ (Aspergillus niger CBS 513.88)
ATGCCCAGAATCCGACGGATCAAATGCGATGAATCGCCAGGACAATGCAA
CAACTGCGTCTCTGCTAACTGGACGTGCGACGGATACGATGCGTACCGGT
TGCCGCAGCGCCGAGGTCTACAGGATATAGGCACTCGGCTGGGTTGGATG
ATGACGTCGGATGAACACCGTTGTTATTCCTATTTTCAATATCGTTCCGT
TACGAATCTGGCCGGGTTCTTCGACTCCCCACTCTGGCAGCAGTTGGCCC
TACAGATGTCTCGCACTGATCCGGCTGTATTTCATGCGGTGAATATGTTG
AGTGCTGCGCACCAGGAGTCGGAATTGCATAATATGCAGATTTCTGCACG
GTCACGCATTGGGAGCCAGCAGTATTACTTTTCTCTTCAGCAGTCCACGC
GGGCCATCGCGCTCCTGAACCAGCGCCGGAACTCCCAGGATCCCCAGCTG
CGCCAAACCATCCTCCTGTGCTGTCTGCTCTTTGTTCTATTCGATGTGCT
TGTCGCGCAGTATGACAGTGCGTTCACGCATTTACACGGCGGTCTCCGTA
TTCTAAAAGAACTCGAAATCCAAGGGAAGCTGGAGTCGGAGGTTGAGCCA
TCAATAGTTGCCGCATTTCGCCGCCTGGATACACAGGCCTCTCTCTATGA
TACTCGGTTTCCGATCCTAAGCCTGGAGTATGGGAATCAATCCCCGCTTA
AGTTGTTCGAAGCACCAACAGGCGGCTTTACTAGCCTTAGCCAGGTACGA
GAGAAAATCACAGTTCTATTCACAGCGGGTATACCCTTGGTTGCAAGGAG
CTGGAGCCTGAACGGTTCCAACATGGAGACCAACTACGAGTCACTCTACC
AAAGTCAACGGCGATTGCTAGATGCTTTCGCTGAGTTTGACCTACATTTC
ACGTCTTTCCGCGTGACAAAATATCATCAGTTAAGCGAGAAGGAGCAATT
GGGAGCAGATATCACCTACTTGCTTTACCTTGGTCACACTCTCACACTCA
AAACTGTGTTAATTCGTGGACCAGTGCCAGAGTCTCTGGTTCCGGAATTC
CTTGCGCTACTTCAGGCCCATGAAGACATGATCGAGAAGCTCAAGTCCGT
CTCGGGCCTTGTAATGGACCACGTCATGATTGCCCACATGTACCTTGTGG
CCACACAATGCCCAGACGTGGGGATTCGCATACGCGCTATTCGTCTTTTG
CGGTCATGGCCACATTACGAGGGCCTTCACAGCTCCAATGTCACTGCTCT
GATGGCGTTGGGTGCGCTCAAAAGGGACTTTCCCAATGAAGACAAGGCCT
TGTCGATGTTGCAGACGACTGACGCGGAGAATGAATTTCTCGTCGACTCC
TTGGAGTCTATCAAGAATGGCGTGGGAGAACCTACAATTCCGCTTTTCAG
GATGTCTGAGTTGCCGTCACGCCCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009736CBS51388_009736Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009736-T1.exon1CBS51388_009736-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009736-T1.cdsCBS51388_009736-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009736-T1CBS51388_009736-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR021858
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:1732221..1733648 +
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