|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:1857890..1858674- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009781-T1 ID=CBS51388_009781-T1|Name=CBS51388_009781-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=785bp|location=Sequence derived from alignment at An15:1857890..1858674- (Aspergillus niger CBS 513.88)
ATGGATGGCTTCGAAATTGCGTCTGAGCTTTTACAAGCTTCACATCATCT
TCCTGTGCTAGGTACAGGTAGCCCGTCAGGGTCAGATATAATCTCGGGAA
ATTACATGTTAGGGTATGCCATGGCTCGTCTCTACACAAGTGAATTATGA
TTGAACAAGTTTGTAGGTATAGCGCCGACGACGCCAATTTGTCTCAATTT
GAGCAGCTCGAGGGCCTTCTAGGCTCGCCGACTGTGGCCAACCATGTGGA
CTTTGGTAAAGAGACGGCCGACCTCGCCTTTCTCGACGATTCAGGGGGTA
TCTTATCGTCGGTTGAGCTGGCTGGGATGGTGTCGCCCCCCTTGGATGCG
GTAGTTCCAATGCCTGGAATCACGAGGGCATCCAGATCACGCCCAGCATT
CAGTACTCCGGCATCGAGGCCAGGGCTGTCGTCGGCGAAATCGCCTTCGC
TAGGAGCAACGAGCCCTGGATCGATGGACCGCAGCGAGGAAGTGAAGCAG
TTGCGCAAGAAGTACCATGAGAAATACAAGGAACGCAACCGGTTGGCTGC
GGGCCGATCGCGGCAGAAGCAGGCAGACCTGATCAATTTGCTCCAAGCGG
AGCAGCAGGAGGAAGAGCGGCGACGCAAGGCCCTGGAACTGGAAATCGCG
AACATGCAGAAGGAACTGGTGGATATGAAGCAAGAGTTGCAGCATCACAT
ACGCATCTCTAACTGTATGTCGATAATGTCACATGGCGCGCATCTGCAAA
CATTGGGGCTCCTGGCCCAGGATGTGCTCAGGTAG back to topCoding sequence (CDS) from alignment at An15:1857890..1858674- >CBS51388_009781-T1 ID=CBS51388_009781-T1|Name=CBS51388_009781-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1464bp|location=Sequence derived from alignment at An15:1857890..1858674- (Aspergillus niger CBS 513.88)
GTATAGCGCCGACGACGCCAATTTGTCTCAATTTGAGCAGCTCGAGGGCC
TTCTAGGCTCGCCGACTGTGGCCAACCATGTGGACTTTGGTAAAGAGACG
GCCGACCTCGCCTTTCTCGACGATTCAGGGGGTATCTTATCGTCGGTTGA
GCTGGCTGGGATGGTGTCGCCCCCCTTGGATGCGGTAGTTCCAATGCCTG
GAATCACGAGGGCATCCAGATCACGCCCAGCATTCAGTACTCCGGCATCG
AGGCCAGGGCTGTCGTCGGCGAAATCGCCTTCGCTAGGAGCAACGAGCCC
TGGATCGATGGACCGCAGCGAGGAAGTGAAGCAGTTGCGCAAGAAGTACC
ATGAGAAATACAAGGAACGCAACCGGTTGGCTGCGGGCCGATCGCGGCAG
AAGCAGGCAGACCTGATCAATTTGCTCCAAGCGGAGCAGCAGGAGGAAGA
GCGGCGACGCAAGGCCCTGGAACTGGAAATCGCGAACATGCAGAAGGAAC
TGGTGGATATGAAGCAAGAGTTGCAGCATCACATACGCATCTCTAACTGT
ATGTCGATAATGTCACATGGCGCGCATCTGCAAACATTGGGGCTCCTGGC
CCAGGATGTGCTCAGGTAGATGGATGGCTTCGAAATTGCGTCTGAGCTTT
TACAAGCTTCACATCATCTTCCTGTGCTAGGTACAGGTAGCCCGTCAGGG
TCAGATATAATCTCGGGAAATTACATGTTAGGGTATAGCGCCGACGACGC
CAATTTGTCTCAATTTGAGCAGCTCGAGGGCCTTCTAGGCTCGCCGACTG
TGGCCAACCATGTGGACTTTGGTAAAGAGACGGCCGACCTCGCCTTTCTC
GACGATTCAGGGGGTATCTTATCGTCGGTTGAGCTGGCTGGGATGGTGTC
GCCCCCCTTGGATGCGGTAGTTCCAATGCCTGGAATCACGAGGGCATCCA
GATCACGCCCAGCATTCAGTACTCCGGCATCGAGGCCAGGGCTGTCGTCG
GCGAAATCGCCTTCGCTAGGAGCAACGAGCCCTGGATCGATGGACCGCAG
CGAGGAAGTGAAGCAGTTGCGCAAGAAGTACCATGAGAAATACAAGGAAC
GCAACCGGTTGGCTGCGGGCCGATCGCGGCAGAAGCAGGCAGACCTGATC
AATTTGCTCCAAGCGGAGCAGCAGGAGGAAGAGCGGCGACGCAAGGCCCT
GGAACTGGAAATCGCGAACATGCAGAAGGAACTGGTGGATATGAAGCAAG
AGTTGCAGCATCACATACGCATCTCTAACTGTATGTCGATAATGTCACAT
GGCGCGCATCTGCAAACATTGGGGCTCCTGGCCCAGGATGTGCTCAGGTA
GATGGATGGCTTCGAAATTGCGTCTGAGCTTTTACAAGCTTCACATCATC
TTCCTGTGCTAGGTACAGGTAGCCCGTCAGGGTCAGATATAATCTCGGGA
AATTACATGTTAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_15.6 |
| Note | antiSMASH:Cluster_15.5 |
| DBxref | InterPro:IPR004827 |
| DBxref | InterPro:IPR000837 |
| Product | Ochratoxin biosynthesis cluster transcription factor ota4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:1857890..1858674 - |
|
