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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:2211..4185+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009787-T1 ID=CBS51388_009787-T1|Name=CBS51388_009787-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1975bp|location=Sequence derived from alignment at An16:2211..4185+ (Aspergillus niger CBS 513.88)
ATGGAGACGAATCCTCCTCTGAATATCAAGACTGATGGCAGACCTAACCA
GCATGAAGCGATGTTGTTAGAGCGTGCGCATGCTGCCAATGCCGCTGACC
ATGCTCTCACCTGGTGGAAAGCAATATTCAAGTACCGGAAAGCCGTCTTC
TGGGCGTGCATTTTTTCGTTCACCCTGACTATGCAATCAGCTGATGCGAC
TTCAGTGAGTTTGATTATAGTGCGAGGAAGGCCTTGTTAGGTGGGGTGCT
GACCAAAAACAAGACAACATCTTTCTACGGCCAGACCCAGTTCAAAGAGA
GGTTTGGCACCGTGGACAATGGTGTCCTTGAAATATCAGCCGAGTGGCAA
ACGGGAATCCAGCAGGCAATGGCCGTGGGCGAGCTGATCGGTCTTGCAGT
GGCTGGCTTTATGGCTGACCGATTTGGTTGGAAGCCAATCCTCAGTGGCA
TGATGGTCTGGCTTACCGGCAGTCTCTTCCTTTTTGCCTTTGCACAAAAC
CTGGGGATGATGGTAGCTGCCATGGTTCTTTGCGGTGATTTTTGATCCTT
CTACTCCGTTGCAAAGAGATTAACGGCCAAGTTAGGGATCCCGTGGGGCG
CTTTTCAAACAGGTTGCATTGCCTACTCTTCCGAGATGGTCCCAACTTGT
CTTCGCCCTTTCGTCACGGCGTGGATAGGCATTTGCTGGGGACTTGGCTT
CTTTATTGGCTCATTGGTCAACAGAGGCTGCCTGAACCTGATCGGCCAGT
GGGGTAAGTATCCCCTACTATTATTCAATCAATTGGAGCTTCCAGTGACA
CAGATTTAACTTAGCCTGGCGTGTGCCCTTCCTTGTTCAGTTTGTGTGGC
CCCTTCCCCTCCTCATCTGCTTCCTTTTGGCCCCGGAATCTCCATACTAT
CTAGTTCGCAGGGGTCGCTATGAGGACGCTCGCACGACCCTGCGCCGCAT
CCGGCAAAAGGATATAACGGACGAGGAGATTGAGCAGTCCATCGCCCTCA
TTGACTATACCAACAAGATGGAAGTTCAAATCAAAGATTCTAGTAGCTAC
GCAGAGTGCTTCCGGGGCAAAAATCGATGGCGGACAGAGATTGTAAGTGG
CGATCGGTATGCTGAAGTACTTCAAGAGATGTTCACAATCAAAAGGTCTG
TATAGTTCAGATAGCCCAAACCTGGGGCGGCAATGGCATCAATGTACAGA
CGGTTCAGTTTTTGGAGCAGGCAGGCCTTTCAGAGCAGGGCGCCTTCGAT
CTGAATTTGATTCTCAACTCTCAGTACCTCACATTTGGCCTGTTCTGCAT
TTGGCTGATGACGAAGTTTGGGCGAGCAACTATCTTCACCACAGGCCTCA
TCCTAAGTGACGTGTTCTTGTTTGCCATAGGGATTCTTGGTTGTGTCGAA
CAAAGCACGGCTGTCTCTAATGCGGTTGGTTCGCTTCTCCTCGTGTCCAC
TGTAATATATATTTCAACCGTCGCTCCGTCTTCATACACCATCATCGTGA
GTCGCGCAGATACACATTTAGGGACGAGTGGTGACATAAAACAGGGCGAA
GTGCCGTCGGGCAAACTCCGAGCTAAAATGGTCTCCCTCGCCCGAGTTGC
CTTCAATGTCTCCAGTCTGATTTCAAATGTTCTACTTCCCAAGATGCTGA
CCGGTGGGTCTTGGAATCTCGGCGCTAAGACAGCCTTTATGTTTGTTAGT
GTCCTTACCCCTGACCTTTCTCCTGCTGATTCCCGCTGATGTGGGTGATA
AAGGCCGGTACGAACGCTTTGATTTGGATCTGGTGCATATTCCGTCTTCC
CGAGACCAAAGATCGAACCTTCCGTGAAATTGATTACCTTTTTGAGGAGT
CTGGGCTACACCCTCGCCAGTGGCGTACGGCTAGGATTGATGTTTTCGAT
GATGATAACAATGGCCCGAGCCTTGTTGTGGGCAATAAAGAGAAGGAAAT
TCAGCATATCGAGAATGCTCTGTAG back to topCoding sequence (CDS) from alignment at An16:2211..4185+ >CBS51388_009787-T1 ID=CBS51388_009787-T1|Name=CBS51388_009787-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8226bp|location=Sequence derived from alignment at An16:2211..4185+ (Aspergillus niger CBS 513.88)
ATGGAGACGAATCCTCCTCTGAATATCAAGACTGATGGCAGACCTAACCA
GCATGAAGCGATGTTGTTAGAGCGTGCGCATGCTGCCAATGCCGCTGACC
ATGCTCTCACCTGGTGGAAAGCAATATTCAAGTACCGGAAAGCCGTCTTC
TGGGCGTGCATTTTTTCGTTCACCCTGACTATGCAATCAGCTGATGCGAC
TTCAACAACATCTTTCTACGGCCAGACCCAGTTCAAAGAGAGGTTTGGCA
CCGTGGACAATGGTGTCCTTGAAATATCAGCCGAGTGGCAAACGGGAATC
CAGCAGGCAATGGCCGTGGGCGAGCTGATCGGTCTTGCAGTGGCTGGCTT
TATGGCTGACCGATTTGGTTGGAAGCCAATCCTCAGTGGCATGATGGTCT
GGCTTACCGGCAGTCTCTTCCTTTTTGCCTTTGCACAAAACCTGGGGATG
ATGGTAGCTGCCATGGTTCTTTGCGTTCGCAGGGGTCGCTATGAGGACGC
TCGCACGACCCTGCGCCGCATCCGGCAAAAGGATATAACGGACGAGGAGA
TTGAGCAGTCCATCGCCCTCATTGACTATACCAACAAGATGGAAGTTCAA
ATCAAAGATTCTAGTAGCTACGCAGAGTGCTTCCGGGGCAAAAATCGATG
GCGGACAGAGATTATAGCCCAAACCTGGGGCGGCAATGGCATCAATGTAC
AGACGGTTCAGTTTTTGGAGCAGGCAGGCCTTTCAGAGCAGGGCGCCTTC
GATCTGAATTTGATTCTCAACTCTCAGTACCTCACATTTGGCCTGTTCTG
CATTTGGCTGATGACGAAGTTTGGGCGAGCAACTATCTTCACCACAGGCC
TCATCCTAAGTGACGTGTTCTTGTTTGCCATAGGGATTCTTGGTTGTGTC
GAACAAAGCACGGCTGTCTCTAATGCGGTTGGTTCGCTTCTCCTCGTGTC
CACTGTAATATATATTTCAACCGTCGCTCCGTCTTCATACACCATCATCG
GCGAAGTGCCGTCGGGCAAACTCCGAGCTAAAATGGTCTCCCTCGCCCGA
GTTGCCTTCAATGTCTCCAGTCTGATTTCAAATGTTCTACTTCCCAAGAT
GCTGACCGGTGGGTCTTGGAATCTCGGCGCTAAGACAGCCTTTATGTTTG
CCGGTACGAACGCTTTGATTTGGATCTGGTGCATATTCCGTCTTCCCGAG
ACCAAAGATCGAACCTTCCGTGAAATTGATTACCTTTTTGAGGAGTCTGG
GCTACACCCTCGCCAGTGGCGTACGGCTAGGATTGATGTTTTCGATGATG
ATAACAATGGCCCGAGCCTTGTTGTGGGCAATAAAGAGAAGGAAATTCAG
CATATCGAGAATGCTCTGTAGATGGAGACGAATCCTCCTCTGAATATCAA
GACTGATGGCAGACCTAACCAGCATGAAGCGATGTTGTTAGAGCGTGCGC
ATGCTGCCAATGCCGCTGACCATGCTCTCACCTGGTGGAAAGCAATATTC
AAGTACCGGAAAGCCGTCTTCTGGGCGTGCATTTTTTCGTTCACCCTGAC
TATGCAATCAGCTGATGCGACTTCAACAACATCTTTCTACGGCCAGACCC
AGTTCAAAGAGAGGTTTGGCACCGTGGACAATGGTGTCCTTGAAATATCA
GCCGAGTGGCAAACGGGAATCCAGCAGGCAATGGCCGTGGGCGAGCTGAT
CGGTCTTGCAGTGGCTGGCTTTATGGCTGACCGATTTGGTTGGAAGCCAA
TCCTCAGTGGCATGATGGTCTGGCTTACCGGCAGTCTCTTCCTTTTTGCC
TTTGCACAAAACCTGGGGATGATGGTAGCTGCCATGGTTCTTTGCGTTCG
CAGGGGTCGCTATGAGGACGCTCGCACGACCCTGCGCCGCATCCGGCAAA
AGGATATAACGGACGAGGAGATTGAGCAGTCCATCGCCCTCATTGACTAT
ACCAACAAGATGGAAGTTCAAATCAAAGATTCTAGTAGCTACGCAGAGTG
CTTCCGGGGCAAAAATCGATGGCGGACAGAGATTATAGCCCAAACCTGGG
GCGGCAATGGCATCAATGTACAGACGGTTCAGTTTTTGGAGCAGGCAGGC
CTTTCAGAGCAGGGCGCCTTCGATCTGAATTTGATTCTCAACTCTCAGTA
CCTCACATTTGGCCTGTTCTGCATTTGGCTGATGACGAAGTTTGGGCGAG
CAACTATCTTCACCACAGGCCTCATCCTAAGTGACGTGTTCTTGTTTGCC
ATAGGGATTCTTGGTTGTGTCGAACAAAGCACGGCTGTCTCTAATGCGGT
TGGTTCGCTTCTCCTCGTGTCCACTGTAATATATATTTCAACCGTCGCTC
CGTCTTCATACACCATCATCGGCGAAGTGCCGTCGGGCAAACTCCGAGCT
AAAATGGTCTCCCTCGCCCGAGTTGCCTTCAATGTCTCCAGTCTGATTTC
AAATGTTCTACTTCCCAAGATGCTGACCGGTGGGTCTTGGAATCTCGGCG
CTAAGACAGCCTTTATGTTTGCCGGTACGAACGCTTTGATTTGGATCTGG
TGCATATTCCGTCTTCCCGAGACCAAAGATCGAACCTTCCGTGAAATTGA
TTACCTTTTTGAGGAGTCTGGGCTACACCCTCGCCAGTGGCGTACGGCTA
GGATTGATGTTTTCGATGATGATAACAATGGCCCGAGCCTTGTTGTGGGC
AATAAAGAGAAGGAAATTCAGCATATCGAGAATGCTCTGTAGATGGAGAC
GAATCCTCCTCTGAATATCAAGACTGATGGCAGACCTAACCAGCATGAAG
CGATGTTGTTAGAGCGTGCGCATGCTGCCAATGCCGCTGACCATGCTCTC
ACCTGGTGGAAAGCAATATTCAAGTACCGGAAAGCCGTCTTCTGGGCGTG
CATTTTTTCGTTCACCCTGACTATGCAATCAGCTGATGCGACTTCAACAA
CATCTTTCTACGGCCAGACCCAGTTCAAAGAGAGGTTTGGCACCGTGGAC
AATGGTGTCCTTGAAATATCAGCCGAGTGGCAAACGGGAATCCAGCAGGC
AATGGCCGTGGGCGAGCTGATCGGTCTTGCAGTGGCTGGCTTTATGGCTG
ACCGATTTGGTTGGAAGCCAATCCTCAGTGGCATGATGGTCTGGCTTACC
GGCAGTCTCTTCCTTTTTGCCTTTGCACAAAACCTGGGGATGATGGTAGC
TGCCATGGTTCTTTGCGTTCGCAGGGGTCGCTATGAGGACGCTCGCACGA
CCCTGCGCCGCATCCGGCAAAAGGATATAACGGACGAGGAGATTGAGCAG
TCCATCGCCCTCATTGACTATACCAACAAGATGGAAGTTCAAATCAAAGA
TTCTAGTAGCTACGCAGAGTGCTTCCGGGGCAAAAATCGATGGCGGACAG
AGATTATAGCCCAAACCTGGGGCGGCAATGGCATCAATGTACAGACGGTT
CAGTTTTTGGAGCAGGCAGGCCTTTCAGAGCAGGGCGCCTTCGATCTGAA
TTTGATTCTCAACTCTCAGTACCTCACATTTGGCCTGTTCTGCATTTGGC
TGATGACGAAGTTTGGGCGAGCAACTATCTTCACCACAGGCCTCATCCTA
AGTGACGTGTTCTTGTTTGCCATAGGGATTCTTGGTTGTGTCGAACAAAG
CACGGCTGTCTCTAATGCGGTTGGTTCGCTTCTCCTCGTGTCCACTGTAA
TATATATTTCAACCGTCGCTCCGTCTTCATACACCATCATCGGCGAAGTG
CCGTCGGGCAAACTCCGAGCTAAAATGGTCTCCCTCGCCCGAGTTGCCTT
CAATGTCTCCAGTCTGATTTCAAATGTTCTACTTCCCAAGATGCTGACCG
GTGGGTCTTGGAATCTCGGCGCTAAGACAGCCTTTATGTTTGCCGGTACG
AACGCTTTGATTTGGATCTGGTGCATATTCCGTCTTCCCGAGACCAAAGA
TCGAACCTTCCGTGAAATTGATTACCTTTTTGAGGAGTCTGGGCTACACC
CTCGCCAGTGGCGTACGGCTAGGATTGATGTTTTCGATGATGATAACAAT
GGCCCGAGCCTTGTTGTGGGCAATAAAGAGAAGGAAATTCAGCATATCGA
GAATGCTCTGTAGATGGAGACGAATCCTCCTCTGAATATCAAGACTGATG
GCAGACCTAACCAGCATGAAGCGATGTTGTTAGAGCGTGCGCATGCTGCC
AATGCCGCTGACCATGCTCTCACCTGGTGGAAAGCAATATTCAAGTACCG
GAAAGCCGTCTTCTGGGCGTGCATTTTTTCGTTCACCCTGACTATGCAAT
CAGCTGATGCGACTTCAACAACATCTTTCTACGGCCAGACCCAGTTCAAA
GAGAGGTTTGGCACCGTGGACAATGGTGTCCTTGAAATATCAGCCGAGTG
GCAAACGGGAATCCAGCAGGCAATGGCCGTGGGCGAGCTGATCGGTCTTG
CAGTGGCTGGCTTTATGGCTGACCGATTTGGTTGGAAGCCAATCCTCAGT
GGCATGATGGTCTGGCTTACCGGCAGTCTCTTCCTTTTTGCCTTTGCACA
AAACCTGGGGATGATGGTAGCTGCCATGGTTCTTTGCGTTCGCAGGGGTC
GCTATGAGGACGCTCGCACGACCCTGCGCCGCATCCGGCAAAAGGATATA
ACGGACGAGGAGATTGAGCAGTCCATCGCCCTCATTGACTATACCAACAA
GATGGAAGTTCAAATCAAAGATTCTAGTAGCTACGCAGAGTGCTTCCGGG
GCAAAAATCGATGGCGGACAGAGATTATAGCCCAAACCTGGGGCGGCAAT
GGCATCAATGTACAGACGGTTCAGTTTTTGGAGCAGGCAGGCCTTTCAGA
GCAGGGCGCCTTCGATCTGAATTTGATTCTCAACTCTCAGTACCTCACAT
TTGGCCTGTTCTGCATTTGGCTGATGACGAAGTTTGGGCGAGCAACTATC
TTCACCACAGGCCTCATCCTAAGTGACGTGTTCTTGTTTGCCATAGGGAT
TCTTGGTTGTGTCGAACAAAGCACGGCTGTCTCTAATGCGGTTGGTTCGC
TTCTCCTCGTGTCCACTGTAATATATATTTCAACCGTCGCTCCGTCTTCA
TACACCATCATCGGCGAAGTGCCGTCGGGCAAACTCCGAGCTAAAATGGT
CTCCCTCGCCCGAGTTGCCTTCAATGTCTCCAGTCTGATTTCAAATGTTC
TACTTCCCAAGATGCTGACCGGTGGGTCTTGGAATCTCGGCGCTAAGACA
GCCTTTATGTTTGCCGGTACGAACGCTTTGATTTGGATCTGGTGCATATT
CCGTCTTCCCGAGACCAAAGATCGAACCTTCCGTGAAATTGATTACCTTT
TTGAGGAGTCTGGGCTACACCCTCGCCAGTGGCGTACGGCTAGGATTGAT
GTTTTCGATGATGATAACAATGGCCCGAGCCTTGTTGTGGGCAATAAAGA
GAAGGAAATTCAGCATATCGAGAATGCTCTGTAGATGGAGACGAATCCTC
CTCTGAATATCAAGACTGATGGCAGACCTAACCAGCATGAAGCGATGTTG
TTAGAGCGTGCGCATGCTGCCAATGCCGCTGACCATGCTCTCACCTGGTG
GAAAGCAATATTCAAGTACCGGAAAGCCGTCTTCTGGGCGTGCATTTTTT
CGTTCACCCTGACTATGCAATCAGCTGATGCGACTTCAACAACATCTTTC
TACGGCCAGACCCAGTTCAAAGAGAGGTTTGGCACCGTGGACAATGGTGT
CCTTGAAATATCAGCCGAGTGGCAAACGGGAATCCAGCAGGCAATGGCCG
TGGGCGAGCTGATCGGTCTTGCAGTGGCTGGCTTTATGGCTGACCGATTT
GGTTGGAAGCCAATCCTCAGTGGCATGATGGTCTGGCTTACCGGCAGTCT
CTTCCTTTTTGCCTTTGCACAAAACCTGGGGATGATGGTAGCTGCCATGG
TTCTTTGCGTTCGCAGGGGTCGCTATGAGGACGCTCGCACGACCCTGCGC
CGCATCCGGCAAAAGGATATAACGGACGAGGAGATTGAGCAGTCCATCGC
CCTCATTGACTATACCAACAAGATGGAAGTTCAAATCAAAGATTCTAGTA
GCTACGCAGAGTGCTTCCGGGGCAAAAATCGATGGCGGACAGAGATTATA
GCCCAAACCTGGGGCGGCAATGGCATCAATGTACAGACGGTTCAGTTTTT
GGAGCAGGCAGGCCTTTCAGAGCAGGGCGCCTTCGATCTGAATTTGATTC
TCAACTCTCAGTACCTCACATTTGGCCTGTTCTGCATTTGGCTGATGACG
AAGTTTGGGCGAGCAACTATCTTCACCACAGGCCTCATCCTAAGTGACGT
GTTCTTGTTTGCCATAGGGATTCTTGGTTGTGTCGAACAAAGCACGGCTG
TCTCTAATGCGGTTGGTTCGCTTCTCCTCGTGTCCACTGTAATATATATT
TCAACCGTCGCTCCGTCTTCATACACCATCATCGGCGAAGTGCCGTCGGG
CAAACTCCGAGCTAAAATGGTCTCCCTCGCCCGAGTTGCCTTCAATGTCT
CCAGTCTGATTTCAAATGTTCTACTTCCCAAGATGCTGACCGGTGGGTCT
TGGAATCTCGGCGCTAAGACAGCCTTTATGTTTGCCGGTACGAACGCTTT
GATTTGGATCTGGTGCATATTCCGTCTTCCCGAGACCAAAGATCGAACCT
TCCGTGAAATTGATTACCTTTTTGAGGAGTCTGGGCTACACCCTCGCCAG
TGGCGTACGGCTAGGATTGATGTTTTCGATGATGATAACAATGGCCCGAG
CCTTGTTGTGGGCAATAAAGAGAAGGAAATTCAGCATATCGAGAATGCTC
TGTAGATGGAGACGAATCCTCCTCTGAATATCAAGACTGATGGCAGACCT
AACCAGCATGAAGCGATGTTGTTAGAGCGTGCGCATGCTGCCAATGCCGC
TGACCATGCTCTCACCTGGTGGAAAGCAATATTCAAGTACCGGAAAGCCG
TCTTCTGGGCGTGCATTTTTTCGTTCACCCTGACTATGCAATCAGCTGAT
GCGACTTCAACAACATCTTTCTACGGCCAGACCCAGTTCAAAGAGAGGTT
TGGCACCGTGGACAATGGTGTCCTTGAAATATCAGCCGAGTGGCAAACGG
GAATCCAGCAGGCAATGGCCGTGGGCGAGCTGATCGGTCTTGCAGTGGCT
GGCTTTATGGCTGACCGATTTGGTTGGAAGCCAATCCTCAGTGGCATGAT
GGTCTGGCTTACCGGCAGTCTCTTCCTTTTTGCCTTTGCACAAAACCTGG
GGATGATGGTAGCTGCCATGGTTCTTTGCGTTCGCAGGGGTCGCTATGAG
GACGCTCGCACGACCCTGCGCCGCATCCGGCAAAAGGATATAACGGACGA
GGAGATTGAGCAGTCCATCGCCCTCATTGACTATACCAACAAGATGGAAG
TTCAAATCAAAGATTCTAGTAGCTACGCAGAGTGCTTCCGGGGCAAAAAT
CGATGGCGGACAGAGATTATAGCCCAAACCTGGGGCGGCAATGGCATCAA
TGTACAGACGGTTCAGTTTTTGGAGCAGGCAGGCCTTTCAGAGCAGGGCG
CCTTCGATCTGAATTTGATTCTCAACTCTCAGTACCTCACATTTGGCCTG
TTCTGCATTTGGCTGATGACGAAGTTTGGGCGAGCAACTATCTTCACCAC
AGGCCTCATCCTAAGTGACGTGTTCTTGTTTGCCATAGGGATTCTTGGTT
GTGTCGAACAAAGCACGGCTGTCTCTAATGCGGTTGGTTCGCTTCTCCTC
GTGTCCACTGTAATATATATTTCAACCGTCGCTCCGTCTTCATACACCAT
CATCGGCGAAGTGCCGTCGGGCAAACTCCGAGCTAAAATGGTCTCCCTCG
CCCGAGTTGCCTTCAATGTCTCCAGTCTGATTTCAAATGTTCTACTTCCC
AAGATGCTGACCGGTGGGTCTTGGAATCTCGGCGCTAAGACAGCCTTTAT
GTTTGCCGGTACGAACGCTTTGATTTGGATCTGGTGCATATTCCGTCTTC
CCGAGACCAAAGATCGAACCTTCCGTGAAATTGATTACCTTTTTGAGGAG
TCTGGGCTACACCCTCGCCAGTGGCGTACGGCTAGGATTGATGTTTTCGA
TGATGATAACAATGGCCCGAGCCTTGTTGTGGGCAATAAAGAGAAGGAAA
TTCAGCATATCGAGAATGCTCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF00083 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:2211..4185 + |
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