|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:10607..12021+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009790-T1 ID=CBS51388_009790-T1|Name=CBS51388_009790-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1415bp|location=Sequence derived from alignment at An16:10607..12021+ (Aspergillus niger CBS 513.88)
ATGGCAAGCGACCGGAAGTCAACCACAGTGATAACCGCCCCAGGCAACTG
TGACAGCCTTGGGATACACCCTCATCCGTCACCTACTGACTATGATGTGA
CTGTTGTGCTTGGCCCTGTTGCGTCAACATACGACAAGAGCTCTTCAGAC
GAAAATCATGCCGACGGCGACAACCACATGCAGGGCCGGCATTCGGTGAC
AAAAGGGACAGGCAAAGAACTTCAGACGCAAACAAACCTACTTCCCATGA
AGCAGTTGCTTGTGGTCTTCTCTGGGCTATCAGTAGCGATGCTATGTGAG
TGAATACCGCTCCAACCTAGGGATGTCGGCGAGCTCACCTGACTGACTTG
TACATAATTTCCACAGGCTCGATGCTCAACCAGACTATGTACGTTTGTTA
CATCCCTCCCATATCCGGGTATTTGTTTTTCCCGCCCTAACTTACGGACT
CTCTGAAGCGTTGCAACTGCCCTGCCCACCCTTGGTGCTGTATTCAATCA
AGCTGATATCGTTTCCTGGGTTGGTACAGCGTACCTCCTAACTTGTACGG
CATGTCAACCACTATATGGCCGGTTGACGGACATCTTTGGCCGGAAGGTA
AGTCTCCCAAATGCGGGAACTAAGCAGTCCTATCACTTATGCAGCATTTG
ACGGAGCATTAAACTTCAGGTGATTCTCTTGGGCTCGCTCTTCCTTTTCC
TGATAGGAAGTGTCATTTCCGGTGTCTCGAGGGGCATGACCATGCTGATC
ATAGCGCGTGAGTCATGGTAACTGAATTGATCTCGCCGGCCTCCACGCTA
ATACCATTCAAACTCAGGGGCGGTAGCGGGAATCGGTGGTGGAGGCATTG
TTACCGTGGTCAGTATCGTCGTGTCTGACGTCGTGTCTCTTCAGGACAGA
GGGAAGTACCAAGGAATTATTGGAATCGTCGTGGCAGCCGGAACTGCCCT
GGGCCCTTTGATTGGCGGTCTTTTCACCGAGAAGATTTCCTGGAGGTGGT
GTTTTGTACGTTCTCTCCGGCATACCTGTTTTGGATGACCATCGCTAAGC
GTTACCAGTACATCAGTGTGCCCTTATCCGGGGTTGCTATGGTCGTTGTT
GCCTTTGCCCTACCCCTCCGGAAGGTTGAAGGCCATGCGTTAGAGAAGAT
CAAGCAGATTGACGGCTGGGGATGTTTGATCAGTTTCTCTGCGTCAATTG
CGATCTTGCTTCCCATCTCATGGTATGCCCAACAGTTCTTCCACCCACCC
TCAGTATGGTTCCTCCCGGGGTATAATAACCACTCGCAATTTATTAGGGC
TGGCACCCAGTATTCTTGGACTTCGGCGGCTGTTATAGCGCCGCTTTTAC
TCGGTGTAGCGCTCATTGGAGTCTTTCTCTTTGTCGAGTTCAAAGTGGCC
AGGTTGCCCTTGTAA back to topCoding sequence (CDS) from alignment at An16:10607..12021+ >CBS51388_009790-T1 ID=CBS51388_009790-T1|Name=CBS51388_009790-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7098bp|location=Sequence derived from alignment at An16:10607..12021+ (Aspergillus niger CBS 513.88)
ATGGCAAGCGACCGGAAGTCAACCACAGTGATAACCGCCCCAGGCAACTG
TGACAGCCTTGGGATACACCCTCATCCGTCACCTACTGACTATGATGTGA
CTGTTGTGCTTGGCCCTGTTGCGTCAACATACGACAAGAGCTCTTCAGAC
GAAAATCATGCCGACGGCGACAACCACATGCAGGGCCGGCATTCGGTGAC
AAAAGGGACAGGCAAAGAACTTCAGACGCAAACAAACCTACTTCCCATGA
AGCAGTTGCTTGTGGTCTTCTCTGGGCTATCAGTAGCGATGCTATGCTCG
ATGCTCAACCAGACTATCGTTGCAACTGCCCTGCCCACCCTTGGTGCTGT
ATTCAATCAAGCTGATATCGTTTCCTGGGTTGGTACAGCGTACCTCCTAA
CTTGTACGGCATGTCAACCACTATATGGCCGGTTGACGGACATCTTTGGC
CGGAAGGTGATTCTCTTGGGCTCGCTCTTCCTTTTCCTGATAGGAAGTGT
CATTTCCGGTGTCTCGAGGGGCATGACCATGCTGATCATAGCGCGGGCGG
TAGCGGGAATCGGTGGTGGAGGCATTGTTACCGTGGTCAGTATCGTCGTG
TCTGACGTCGTGTCTCTTCAGGACAGAGGGAAGTACCAAGGAATTATTGG
AATCGTCGTGGCAGCCGGAACTGCCCTGGGCCCTTTGATTGGCGGTCTTT
TCACCGAGAAGATTTCCTGGAGGTGGTGTTTTTACATCAGTGTGCCCTTA
TCCGGGGTTGCTATGGTCGTTGTTGCCTTTGCCCTACCCCTCCGGAAGGT
TGAAGGCCATGCGTTAGAGAAGATCAAGCAGATTGACGGCTGGGGATGTT
TGATCAGTTTCTCTGCGTCAATTGCGATCTTGCTTCCCATCTCATGGGCT
GGCACCCAGTATTCTTGGACTTCGGCGGCTGTTATAGCGCCGCTTTTACT
CGGTGTAGCGCTCATTGGAGTCTTTCTCTTTGTCGAGTTCAAAGTGGCCA
GGTTGCCCTTGTAAATGGCAAGCGACCGGAAGTCAACCACAGTGATAACC
GCCCCAGGCAACTGTGACAGCCTTGGGATACACCCTCATCCGTCACCTAC
TGACTATGATGTGACTGTTGTGCTTGGCCCTGTTGCGTCAACATACGACA
AGAGCTCTTCAGACGAAAATCATGCCGACGGCGACAACCACATGCAGGGC
CGGCATTCGGTGACAAAAGGGACAGGCAAAGAACTTCAGACGCAAACAAA
CCTACTTCCCATGAAGCAGTTGCTTGTGGTCTTCTCTGGGCTATCAGTAG
CGATGCTATGCTCGATGCTCAACCAGACTATCGTTGCAACTGCCCTGCCC
ACCCTTGGTGCTGTATTCAATCAAGCTGATATCGTTTCCTGGGTTGGTAC
AGCGTACCTCCTAACTTGTACGGCATGTCAACCACTATATGGCCGGTTGA
CGGACATCTTTGGCCGGAAGGTGATTCTCTTGGGCTCGCTCTTCCTTTTC
CTGATAGGAAGTGTCATTTCCGGTGTCTCGAGGGGCATGACCATGCTGAT
CATAGCGCGGGCGGTAGCGGGAATCGGTGGTGGAGGCATTGTTACCGTGG
TCAGTATCGTCGTGTCTGACGTCGTGTCTCTTCAGGACAGAGGGAAGTAC
CAAGGAATTATTGGAATCGTCGTGGCAGCCGGAACTGCCCTGGGCCCTTT
GATTGGCGGTCTTTTCACCGAGAAGATTTCCTGGAGGTGGTGTTTTTACA
TCAGTGTGCCCTTATCCGGGGTTGCTATGGTCGTTGTTGCCTTTGCCCTA
CCCCTCCGGAAGGTTGAAGGCCATGCGTTAGAGAAGATCAAGCAGATTGA
CGGCTGGGGATGTTTGATCAGTTTCTCTGCGTCAATTGCGATCTTGCTTC
CCATCTCATGGGCTGGCACCCAGTATTCTTGGACTTCGGCGGCTGTTATA
GCGCCGCTTTTACTCGGTGTAGCGCTCATTGGAGTCTTTCTCTTTGTCGA
GTTCAAAGTGGCCAGGTTGCCCTTGTAAATGGCAAGCGACCGGAAGTCAA
CCACAGTGATAACCGCCCCAGGCAACTGTGACAGCCTTGGGATACACCCT
CATCCGTCACCTACTGACTATGATGTGACTGTTGTGCTTGGCCCTGTTGC
GTCAACATACGACAAGAGCTCTTCAGACGAAAATCATGCCGACGGCGACA
ACCACATGCAGGGCCGGCATTCGGTGACAAAAGGGACAGGCAAAGAACTT
CAGACGCAAACAAACCTACTTCCCATGAAGCAGTTGCTTGTGGTCTTCTC
TGGGCTATCAGTAGCGATGCTATGCTCGATGCTCAACCAGACTATCGTTG
CAACTGCCCTGCCCACCCTTGGTGCTGTATTCAATCAAGCTGATATCGTT
TCCTGGGTTGGTACAGCGTACCTCCTAACTTGTACGGCATGTCAACCACT
ATATGGCCGGTTGACGGACATCTTTGGCCGGAAGGTGATTCTCTTGGGCT
CGCTCTTCCTTTTCCTGATAGGAAGTGTCATTTCCGGTGTCTCGAGGGGC
ATGACCATGCTGATCATAGCGCGGGCGGTAGCGGGAATCGGTGGTGGAGG
CATTGTTACCGTGGTCAGTATCGTCGTGTCTGACGTCGTGTCTCTTCAGG
ACAGAGGGAAGTACCAAGGAATTATTGGAATCGTCGTGGCAGCCGGAACT
GCCCTGGGCCCTTTGATTGGCGGTCTTTTCACCGAGAAGATTTCCTGGAG
GTGGTGTTTTTACATCAGTGTGCCCTTATCCGGGGTTGCTATGGTCGTTG
TTGCCTTTGCCCTACCCCTCCGGAAGGTTGAAGGCCATGCGTTAGAGAAG
ATCAAGCAGATTGACGGCTGGGGATGTTTGATCAGTTTCTCTGCGTCAAT
TGCGATCTTGCTTCCCATCTCATGGGCTGGCACCCAGTATTCTTGGACTT
CGGCGGCTGTTATAGCGCCGCTTTTACTCGGTGTAGCGCTCATTGGAGTC
TTTCTCTTTGTCGAGTTCAAAGTGGCCAGGTTGCCCTTGTAAATGGCAAG
CGACCGGAAGTCAACCACAGTGATAACCGCCCCAGGCAACTGTGACAGCC
TTGGGATACACCCTCATCCGTCACCTACTGACTATGATGTGACTGTTGTG
CTTGGCCCTGTTGCGTCAACATACGACAAGAGCTCTTCAGACGAAAATCA
TGCCGACGGCGACAACCACATGCAGGGCCGGCATTCGGTGACAAAAGGGA
CAGGCAAAGAACTTCAGACGCAAACAAACCTACTTCCCATGAAGCAGTTG
CTTGTGGTCTTCTCTGGGCTATCAGTAGCGATGCTATGCTCGATGCTCAA
CCAGACTATCGTTGCAACTGCCCTGCCCACCCTTGGTGCTGTATTCAATC
AAGCTGATATCGTTTCCTGGGTTGGTACAGCGTACCTCCTAACTTGTACG
GCATGTCAACCACTATATGGCCGGTTGACGGACATCTTTGGCCGGAAGGT
GATTCTCTTGGGCTCGCTCTTCCTTTTCCTGATAGGAAGTGTCATTTCCG
GTGTCTCGAGGGGCATGACCATGCTGATCATAGCGCGGGCGGTAGCGGGA
ATCGGTGGTGGAGGCATTGTTACCGTGGTCAGTATCGTCGTGTCTGACGT
CGTGTCTCTTCAGGACAGAGGGAAGTACCAAGGAATTATTGGAATCGTCG
TGGCAGCCGGAACTGCCCTGGGCCCTTTGATTGGCGGTCTTTTCACCGAG
AAGATTTCCTGGAGGTGGTGTTTTTACATCAGTGTGCCCTTATCCGGGGT
TGCTATGGTCGTTGTTGCCTTTGCCCTACCCCTCCGGAAGGTTGAAGGCC
ATGCGTTAGAGAAGATCAAGCAGATTGACGGCTGGGGATGTTTGATCAGT
TTCTCTGCGTCAATTGCGATCTTGCTTCCCATCTCATGGGCTGGCACCCA
GTATTCTTGGACTTCGGCGGCTGTTATAGCGCCGCTTTTACTCGGTGTAG
CGCTCATTGGAGTCTTTCTCTTTGTCGAGTTCAAAGTGGCCAGGTTGCCC
TTGTAAATGGCAAGCGACCGGAAGTCAACCACAGTGATAACCGCCCCAGG
CAACTGTGACAGCCTTGGGATACACCCTCATCCGTCACCTACTGACTATG
ATGTGACTGTTGTGCTTGGCCCTGTTGCGTCAACATACGACAAGAGCTCT
TCAGACGAAAATCATGCCGACGGCGACAACCACATGCAGGGCCGGCATTC
GGTGACAAAAGGGACAGGCAAAGAACTTCAGACGCAAACAAACCTACTTC
CCATGAAGCAGTTGCTTGTGGTCTTCTCTGGGCTATCAGTAGCGATGCTA
TGCTCGATGCTCAACCAGACTATCGTTGCAACTGCCCTGCCCACCCTTGG
TGCTGTATTCAATCAAGCTGATATCGTTTCCTGGGTTGGTACAGCGTACC
TCCTAACTTGTACGGCATGTCAACCACTATATGGCCGGTTGACGGACATC
TTTGGCCGGAAGGTGATTCTCTTGGGCTCGCTCTTCCTTTTCCTGATAGG
AAGTGTCATTTCCGGTGTCTCGAGGGGCATGACCATGCTGATCATAGCGC
GGGCGGTAGCGGGAATCGGTGGTGGAGGCATTGTTACCGTGGTCAGTATC
GTCGTGTCTGACGTCGTGTCTCTTCAGGACAGAGGGAAGTACCAAGGAAT
TATTGGAATCGTCGTGGCAGCCGGAACTGCCCTGGGCCCTTTGATTGGCG
GTCTTTTCACCGAGAAGATTTCCTGGAGGTGGTGTTTTTACATCAGTGTG
CCCTTATCCGGGGTTGCTATGGTCGTTGTTGCCTTTGCCCTACCCCTCCG
GAAGGTTGAAGGCCATGCGTTAGAGAAGATCAAGCAGATTGACGGCTGGG
GATGTTTGATCAGTTTCTCTGCGTCAATTGCGATCTTGCTTCCCATCTCA
TGGGCTGGCACCCAGTATTCTTGGACTTCGGCGGCTGTTATAGCGCCGCT
TTTACTCGGTGTAGCGCTCATTGGAGTCTTTCTCTTTGTCGAGTTCAAAG
TGGCCAGGTTGCCCTTGTAAATGGCAAGCGACCGGAAGTCAACCACAGTG
ATAACCGCCCCAGGCAACTGTGACAGCCTTGGGATACACCCTCATCCGTC
ACCTACTGACTATGATGTGACTGTTGTGCTTGGCCCTGTTGCGTCAACAT
ACGACAAGAGCTCTTCAGACGAAAATCATGCCGACGGCGACAACCACATG
CAGGGCCGGCATTCGGTGACAAAAGGGACAGGCAAAGAACTTCAGACGCA
AACAAACCTACTTCCCATGAAGCAGTTGCTTGTGGTCTTCTCTGGGCTAT
CAGTAGCGATGCTATGCTCGATGCTCAACCAGACTATCGTTGCAACTGCC
CTGCCCACCCTTGGTGCTGTATTCAATCAAGCTGATATCGTTTCCTGGGT
TGGTACAGCGTACCTCCTAACTTGTACGGCATGTCAACCACTATATGGCC
GGTTGACGGACATCTTTGGCCGGAAGGTGATTCTCTTGGGCTCGCTCTTC
CTTTTCCTGATAGGAAGTGTCATTTCCGGTGTCTCGAGGGGCATGACCAT
GCTGATCATAGCGCGGGCGGTAGCGGGAATCGGTGGTGGAGGCATTGTTA
CCGTGGTCAGTATCGTCGTGTCTGACGTCGTGTCTCTTCAGGACAGAGGG
AAGTACCAAGGAATTATTGGAATCGTCGTGGCAGCCGGAACTGCCCTGGG
CCCTTTGATTGGCGGTCTTTTCACCGAGAAGATTTCCTGGAGGTGGTGTT
TTTACATCAGTGTGCCCTTATCCGGGGTTGCTATGGTCGTTGTTGCCTTT
GCCCTACCCCTCCGGAAGGTTGAAGGCCATGCGTTAGAGAAGATCAAGCA
GATTGACGGCTGGGGATGTTTGATCAGTTTCTCTGCGTCAATTGCGATCT
TGCTTCCCATCTCATGGGCTGGCACCCAGTATTCTTGGACTTCGGCGGCT
GTTATAGCGCCGCTTTTACTCGGTGTAGCGCTCATTGGAGTCTTTCTCTT
TGTCGAGTTCAAAGTGGCCAGGTTGCCCTTGTAAATGGCAAGCGACCGGA
AGTCAACCACAGTGATAACCGCCCCAGGCAACTGTGACAGCCTTGGGATA
CACCCTCATCCGTCACCTACTGACTATGATGTGACTGTTGTGCTTGGCCC
TGTTGCGTCAACATACGACAAGAGCTCTTCAGACGAAAATCATGCCGACG
GCGACAACCACATGCAGGGCCGGCATTCGGTGACAAAAGGGACAGGCAAA
GAACTTCAGACGCAAACAAACCTACTTCCCATGAAGCAGTTGCTTGTGGT
CTTCTCTGGGCTATCAGTAGCGATGCTATGCTCGATGCTCAACCAGACTA
TCGTTGCAACTGCCCTGCCCACCCTTGGTGCTGTATTCAATCAAGCTGAT
ATCGTTTCCTGGGTTGGTACAGCGTACCTCCTAACTTGTACGGCATGTCA
ACCACTATATGGCCGGTTGACGGACATCTTTGGCCGGAAGGTGATTCTCT
TGGGCTCGCTCTTCCTTTTCCTGATAGGAAGTGTCATTTCCGGTGTCTCG
AGGGGCATGACCATGCTGATCATAGCGCGGGCGGTAGCGGGAATCGGTGG
TGGAGGCATTGTTACCGTGGTCAGTATCGTCGTGTCTGACGTCGTGTCTC
TTCAGGACAGAGGGAAGTACCAAGGAATTATTGGAATCGTCGTGGCAGCC
GGAACTGCCCTGGGCCCTTTGATTGGCGGTCTTTTCACCGAGAAGATTTC
CTGGAGGTGGTGTTTTTACATCAGTGTGCCCTTATCCGGGGTTGCTATGG
TCGTTGTTGCCTTTGCCCTACCCCTCCGGAAGGTTGAAGGCCATGCGTTA
GAGAAGATCAAGCAGATTGACGGCTGGGGATGTTTGATCAGTTTCTCTGC
GTCAATTGCGATCTTGCTTCCCATCTCATGGGCTGGCACCCAGTATTCTT
GGACTTCGGCGGCTGTTATAGCGCCGCTTTTACTCGGTGTAGCGCTCATT
GGAGTCTTTCTCTTTGTCGAGTTCAAAGTGGCCAGGTTGCCCTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:10607..12021 + |
|
