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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:21796..23419+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009794-T1 ID=CBS51388_009794-T1|Name=CBS51388_009794-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1624bp|location=Sequence derived from alignment at An16:21796..23419+ (Aspergillus niger CBS 513.88)
ATGGGTGCATCCGATCCCATCGCCAACCCCGACTTGGAAAAGGGTCAGCC
GCCGGCGACTGTGCAGCCCACCGAGCGACACCAGGACAACATCGTGGATT
ATGATGGCCCCGATGACCCGGAAAACCCATTCAATTGGCCTCGCTGGAAG
AAAGGGCGCCAGCTAGTTCTAATGGCATTCAACACCTTCATCACGTATGT
CTTGCTGCTTTTCGGTCTTGGCTTTATCATATCCACTTCTTCCGTTCTTG
GGCTAGATGGCTAATGCTACCACATCAGACCCTTGGCTTCCTCCATGTTC
GCCCCCGGAGTGGAGGATGTGATGATCGATTTTCACTCCACCAGTACCAT
GCTCGCCTCCTTCGTGGTGTCTGTCTATGTCCTAGGCTATATGATCGGGC
CTTTTCTCATCGCCCCGCTCTCGGAGATTTATGGTCGGGTGTACCTCTAT
CATGCATGCAACATCCTATTCCTTATCTTCACCATCGCCTGCGCCGTGGC
CCAGACCATGCCACAGCTGATTGTCTTTCGTCTGCTGGCTGGCACCGCCG
GCGTTTGCCCCCTCACCATCGGCTCAGGCACCGTGGCCGACATGGTCCCC
AAGGAAAAGCGCGCCGGCATCATGGCCATCTGGGCGATGGGGCCCATCCT
CGGCCCCGTGGTGGGACCGGTAGCTGGTGGCTTTCTCGCCGAAGCTGAAG
GCTGGCGCTGGGTGTTTTGGGTGATTGCGATCGCGGTAAGTCCAAACTTC
CACTTCCACAATCCCTCACCCGCAAATGCATTGACTGTTTTGTCCATAGA
CCGCAGTGATGAGCATTCTCTGCATGATCTGGTATCGCGAAACATATGCC
CCGGTCATTCTGGAGCGGAAAGCGGCCCGGTTACGCAAGGCCACGGGCAA
TCCCAACCTGCGTTCAGTCCATGACCGTGGCCAACAGGCGCACGAGCTCC
TTCTGGTCGCATTGGCTCGCCCGGTTAAGCTCCTCGTCAAATCGCCCATT
GTCCTCCTCATGGTGCTCTTTGCCGCCATCACCTATGGCTACTTGTACCT
GATGTTCACCACCATCACCTCCATCTTCGAGGACGTCTATCATTTCTCCC
CGGGCGTCGCGGGCCTGGCCTACCTGGGATTTGGTGTGGGCTGTCTCATC
GGCCTCGTCATCTGTGGTGCCGTTTCCAATCATATTGCGCGCACCCATTC
GGCCAGGGGTTGTTTTACCCCCGAATCTCGCCTGCCGCCCATGGTCTTCG
GCTGTTGGGCCATCCCCATTGGCTTGTTCTGGTACGGCTGGGCGGCCAAG
GCGCAAACGCACTGGATCGTCCCCATCTTGGGCACGGGCGTCTTTGCCAT
TGGCCTGATGACCGTCTTTATGTCGGCCAGTACCTACCTGGTCGACTCCT
ACCTCCGCTACGCGGCCTCGGTGACGGCAGCCAACACGGGTCTACGATCG
CTGGTCGGGGCCCTGTTACCCTTGGCCGGACCTTCCATGTACGATGCCCT
GGGCTTGGGATGGGGCAATTCCCTTCTCGCCTTCATTGCGCTCGTGATGT
GCGCGTGTCCGCTGCTCTTCTGGCGGTACGGGGCACGCATCCGGACGCAC
CCTCGATTTCAGGTGAAGTTGTAA back to topCoding sequence (CDS) from alignment at An16:21796..23419+ >CBS51388_009794-T1 ID=CBS51388_009794-T1|Name=CBS51388_009794-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4428bp|location=Sequence derived from alignment at An16:21796..23419+ (Aspergillus niger CBS 513.88)
ATGGGTGCATCCGATCCCATCGCCAACCCCGACTTGGAAAAGGGTCAGCC
GCCGGCGACTGTGCAGCCCACCGAGCGACACCAGGACAACATCGTGGATT
ATGATGGCCCCGATGACCCGGAAAACCCATTCAATTGGCCTCGCTGGAAG
AAAGGGCGCCAGCTAGTTCTAATGGCATTCAACACCTTCATCACACCCTT
GGCTTCCTCCATGTTCGCCCCCGGAGTGGAGGATGTGATGATCGATTTTC
ACTCCACCAGTACCATGCTCGCCTCCTTCGTGGTGTCTGTCTATGTCCTA
GGCTATATGATCGGGCCTTTTCTCATCGCCCCGCTCTCGGAGATTTATGG
TCGGGTGTACCTCTATCATGCATGCAACATCCTATTCCTTATCTTCACCA
TCGCCTGCGCCGTGGCCCAGACCATGCCACAGCTGATTGTCTTTCGTCTG
CTGGCTGGCACCGCCGGCGTTTGCCCCCTCACCATCGGCTCAGGCACCGT
GGCCGACATGGTCCCCAAGGAAAAGCGCGCCGGCATCATGGCCATCTGGG
CGATGGGGCCCATCCTCGGCCCCGTGGTGGGACCGGTAGCTGGTGGCTTT
CTCGCCGAAGCTGAAGGCTGGCGCTGGGTGTTTTGGGTGATTGCGATCGC
GACCGCAGTGATGAGCATTCTCTGCATGATCTGGTATCGCGAAACATATG
CCCCGGTCATTCTGGAGCGGAAAGCGGCCCGGTTACGCAAGGCCACGGGC
AATCCCAACCTGCGTTCAGTCCATGACCGTGGCCAACAGGCGCACGAGCT
CCTTCTGGTCGCATTGGCTCGCCCGGTTAAGCTCCTCGTCAAATCGCCCA
TTGTCCTCCTCATGGTGCTCTTTGCCGCCATCACCTATGGCTACTTGTAC
CTGATGTTCACCACCATCACCTCCATCTTCGAGGACGTCTATCATTTCTC
CCCGGGCGTCGCGGGCCTGGCCTACCTGGGATTTGGTGTGGGCTGTCTCA
TCGGCCTCGTCATCTGTGGTGCCGTTTCCAATCATATTGCGCGCACCCAT
TCGGCCAGGGGTTGTTTTACCCCCGAATCTCGCCTGCCGCCCATGGTCTT
CGGCTGTTGGGCCATCCCCATTGGCTTGTTCTGGTACGGCTGGGCGGCCA
AGGCGCAAACGCACTGGATCGTCCCCATCTTGGGCACGGGCGTCTTTGCC
ATTGGCCTGATGACCGTCTTTATGTCGGCCAGTACCTACCTGGTCGACTC
CTACCTCCGCTACGCGGCCTCGGTGACGGCAGCCAACACGGGTCTACGAT
CGCTGGTCGGGGCCCTGTTACCCTTGGCCGGACCTTCCATGTACGATGCC
CTGGGCTTGGGATGGGGCAATTCCCTTCTCGCCTTCATTGCGCTCGTGAT
GTGCGCGTGTCCGCTGCTCTTCTGGCGGTACGGGGCACGCATCCGGACGC
ACCCTCGATTTCAGGTGAAGTTGTAAATGGGTGCATCCGATCCCATCGCC
AACCCCGACTTGGAAAAGGGTCAGCCGCCGGCGACTGTGCAGCCCACCGA
GCGACACCAGGACAACATCGTGGATTATGATGGCCCCGATGACCCGGAAA
ACCCATTCAATTGGCCTCGCTGGAAGAAAGGGCGCCAGCTAGTTCTAATG
GCATTCAACACCTTCATCACACCCTTGGCTTCCTCCATGTTCGCCCCCGG
AGTGGAGGATGTGATGATCGATTTTCACTCCACCAGTACCATGCTCGCCT
CCTTCGTGGTGTCTGTCTATGTCCTAGGCTATATGATCGGGCCTTTTCTC
ATCGCCCCGCTCTCGGAGATTTATGGTCGGGTGTACCTCTATCATGCATG
CAACATCCTATTCCTTATCTTCACCATCGCCTGCGCCGTGGCCCAGACCA
TGCCACAGCTGATTGTCTTTCGTCTGCTGGCTGGCACCGCCGGCGTTTGC
CCCCTCACCATCGGCTCAGGCACCGTGGCCGACATGGTCCCCAAGGAAAA
GCGCGCCGGCATCATGGCCATCTGGGCGATGGGGCCCATCCTCGGCCCCG
TGGTGGGACCGGTAGCTGGTGGCTTTCTCGCCGAAGCTGAAGGCTGGCGC
TGGGTGTTTTGGGTGATTGCGATCGCGACCGCAGTGATGAGCATTCTCTG
CATGATCTGGTATCGCGAAACATATGCCCCGGTCATTCTGGAGCGGAAAG
CGGCCCGGTTACGCAAGGCCACGGGCAATCCCAACCTGCGTTCAGTCCAT
GACCGTGGCCAACAGGCGCACGAGCTCCTTCTGGTCGCATTGGCTCGCCC
GGTTAAGCTCCTCGTCAAATCGCCCATTGTCCTCCTCATGGTGCTCTTTG
CCGCCATCACCTATGGCTACTTGTACCTGATGTTCACCACCATCACCTCC
ATCTTCGAGGACGTCTATCATTTCTCCCCGGGCGTCGCGGGCCTGGCCTA
CCTGGGATTTGGTGTGGGCTGTCTCATCGGCCTCGTCATCTGTGGTGCCG
TTTCCAATCATATTGCGCGCACCCATTCGGCCAGGGGTTGTTTTACCCCC
GAATCTCGCCTGCCGCCCATGGTCTTCGGCTGTTGGGCCATCCCCATTGG
CTTGTTCTGGTACGGCTGGGCGGCCAAGGCGCAAACGCACTGGATCGTCC
CCATCTTGGGCACGGGCGTCTTTGCCATTGGCCTGATGACCGTCTTTATG
TCGGCCAGTACCTACCTGGTCGACTCCTACCTCCGCTACGCGGCCTCGGT
GACGGCAGCCAACACGGGTCTACGATCGCTGGTCGGGGCCCTGTTACCCT
TGGCCGGACCTTCCATGTACGATGCCCTGGGCTTGGGATGGGGCAATTCC
CTTCTCGCCTTCATTGCGCTCGTGATGTGCGCGTGTCCGCTGCTCTTCTG
GCGGTACGGGGCACGCATCCGGACGCACCCTCGATTTCAGGTGAAGTTGT
AAATGGGTGCATCCGATCCCATCGCCAACCCCGACTTGGAAAAGGGTCAG
CCGCCGGCGACTGTGCAGCCCACCGAGCGACACCAGGACAACATCGTGGA
TTATGATGGCCCCGATGACCCGGAAAACCCATTCAATTGGCCTCGCTGGA
AGAAAGGGCGCCAGCTAGTTCTAATGGCATTCAACACCTTCATCACACCC
TTGGCTTCCTCCATGTTCGCCCCCGGAGTGGAGGATGTGATGATCGATTT
TCACTCCACCAGTACCATGCTCGCCTCCTTCGTGGTGTCTGTCTATGTCC
TAGGCTATATGATCGGGCCTTTTCTCATCGCCCCGCTCTCGGAGATTTAT
GGTCGGGTGTACCTCTATCATGCATGCAACATCCTATTCCTTATCTTCAC
CATCGCCTGCGCCGTGGCCCAGACCATGCCACAGCTGATTGTCTTTCGTC
TGCTGGCTGGCACCGCCGGCGTTTGCCCCCTCACCATCGGCTCAGGCACC
GTGGCCGACATGGTCCCCAAGGAAAAGCGCGCCGGCATCATGGCCATCTG
GGCGATGGGGCCCATCCTCGGCCCCGTGGTGGGACCGGTAGCTGGTGGCT
TTCTCGCCGAAGCTGAAGGCTGGCGCTGGGTGTTTTGGGTGATTGCGATC
GCGACCGCAGTGATGAGCATTCTCTGCATGATCTGGTATCGCGAAACATA
TGCCCCGGTCATTCTGGAGCGGAAAGCGGCCCGGTTACGCAAGGCCACGG
GCAATCCCAACCTGCGTTCAGTCCATGACCGTGGCCAACAGGCGCACGAG
CTCCTTCTGGTCGCATTGGCTCGCCCGGTTAAGCTCCTCGTCAAATCGCC
CATTGTCCTCCTCATGGTGCTCTTTGCCGCCATCACCTATGGCTACTTGT
ACCTGATGTTCACCACCATCACCTCCATCTTCGAGGACGTCTATCATTTC
TCCCCGGGCGTCGCGGGCCTGGCCTACCTGGGATTTGGTGTGGGCTGTCT
CATCGGCCTCGTCATCTGTGGTGCCGTTTCCAATCATATTGCGCGCACCC
ATTCGGCCAGGGGTTGTTTTACCCCCGAATCTCGCCTGCCGCCCATGGTC
TTCGGCTGTTGGGCCATCCCCATTGGCTTGTTCTGGTACGGCTGGGCGGC
CAAGGCGCAAACGCACTGGATCGTCCCCATCTTGGGCACGGGCGTCTTTG
CCATTGGCCTGATGACCGTCTTTATGTCGGCCAGTACCTACCTGGTCGAC
TCCTACCTCCGCTACGCGGCCTCGGTGACGGCAGCCAACACGGGTCTACG
ATCGCTGGTCGGGGCCCTGTTACCCTTGGCCGGACCTTCCATGTACGATG
CCCTGGGCTTGGGATGGGGCAATTCCCTTCTCGCCTTCATTGCGCTCGTG
ATGTGCGCGTGTCCGCTGCTCTTCTGGCGGTACGGGGCACGCATCCGGAC
GCACCCTCGATTTCAGGTGAAGTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:21796..23419 + |
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