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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:25047..26074+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009795-T1 ID=CBS51388_009795-T1|Name=CBS51388_009795-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1028bp|location=Sequence derived from alignment at An16:25047..26074+ (Aspergillus niger CBS 513.88)
ATGTCTAACTGCCCTCAGTCCCCCCACTCGAACCGCACCCGCACCATCCT
CCACGCCGCAAAGAATGGCAAATACGCCGTCGGCGCCTACAACTGGTACC
CAACCCCCCGGGCAGTTTATTTCTCAACCACCCCAATACTCTCCCAGTAC
TAGAACTAACGAATAAACCAAAAGCTATAATACCGACGGCATCATGGCCG
TCATCCGCGCCGCCGAGCGCATGCGCAGCCCCGCCATAATCCAACTCTTC
CCCTGGACCATGCACTTTCACGGTGCGCACTTCATCCGCTTCGTCGTCGC
CGCTGCACATGCCGCTTCTGTCCCTGTCGCCGTGCATCTCGACCACTGCA
TTAACCCCGAAGATATTGATCTCGCCCTCACTCTTCCCTTTGACTCGATC
ATGATCGATGGGTCAAGCATGAACGAGGCCGAGAATATCGCGGTCTGCGC
GAGCACTGTCAGCAAGGCGCATGAGCGCGGTATGACGGTTGAGGTTGAGT
TAGGGCGCATTGAGGGAGGGGAGGATGGGCTTCCCAGCGTGGATTTAGGC
AGTGTGTTAACCAGGCCAGGCGATGCGAGGCGGTTCCTGGAGGCGACTCA
GGCGGACTTTTTGGCGCCGAGCTTTGGGAACGTGCATGGGGGCTACGGAC
TTGTGGGAGCGGAGAAATGTTGGGATTTAGACTTGTACGCTACCCTTCCT
TTGTCTATTGTCGTTTGGTTGTATGGATGAGGAGGCACTGACTGCATCGA
TCTTGTGCAGGCTTCAACAGATCCAACAGGCTATCTCGTCCACCCCGCTG
GTCTTGCATGGAACGCACCCGGTCTCCGACGAGCTGTTTCTCAAGGCCAT
TGAGTGCGGCATGAGCAAGGTGAATGTCAACCGGACGGTGCGCGACAAAT
ACACGGAGTTTGTGGCAGAGAACGCAGGCGAGCTGGAGTTGACGACGCTC
AAGGTGCAGGCGGTCGAGGTGTATACCGAGTCGGTAGAGAGGGTGATGAA
ACTGCTTGGCTCGGCGGGCAAGGCTTGA back to topCoding sequence (CDS) from alignment at An16:25047..26074+ >CBS51388_009795-T1 ID=CBS51388_009795-T1|Name=CBS51388_009795-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2619bp|location=Sequence derived from alignment at An16:25047..26074+ (Aspergillus niger CBS 513.88)
ATGTCTAACTGCCCTCAGTCCCCCCACTCGAACCGCACCCGCACCATCCT
CCACGCCGCAAAGAATGGCAAATACGCCGTCGGCGCCTACAACTGCTATA
ATACCGACGGCATCATGGCCGTCATCCGCGCCGCCGAGCGCATGCGCAGC
CCCGCCATAATCCAACTCTTCCCCTGGACCATGCACTTTCACGGTGCGCA
CTTCATCCGCTTCGTCGTCGCCGCTGCACATGCCGCTTCTGTCCCTGTCG
CCGTGCATCTCGACCACTGCATTAACCCCGAAGATATTGATCTCGCCCTC
ACTCTTCCCTTTGACTCGATCATGATCGATGGGTCAAGCATGAACGAGGC
CGAGAATATCGCGGTCTGCGCGAGCACTGTCAGCAAGGCGCATGAGCGCG
GTATGACGGTTGAGGTTGAGTTAGGGCGCATTGAGGGAGGGGAGGATGGG
CTTCCCAGCGTGGATTTAGGCAGTGTGTTAACCAGGCCAGGCGATGCGAG
GCGGTTCCTGGAGGCGACTCAGGCGGACTTTTTGGCGCCGAGCTTTGGGA
ACGTGCATGGGGGCTACGGACTTGTGGGAGCGGAGAAATGTTGGGATTTA
GACTTGCTTCAACAGATCCAACAGGCTATCTCGTCCACCCCGCTGGTCTT
GCATGGAACGCACCCGGTCTCCGACGAGCTGTTTCTCAAGGCCATTGAGT
GCGGCATGAGCAAGGTGAATGTCAACCGGACGGTGCGCGACAAATACACG
GAGTTTGTGGCAGAGAACGCAGGCGAGCTGGAGTTGACGACGCTCAAGGT
GCAGGCGGTCGAGGTGTATACCGAGTCGGTAGAGAGGGTGATGAAACTGC
TTGGCTCGGCGGGCAAGGCTTGAATGTCTAACTGCCCTCAGTCCCCCCAC
TCGAACCGCACCCGCACCATCCTCCACGCCGCAAAGAATGGCAAATACGC
CGTCGGCGCCTACAACTGCTATAATACCGACGGCATCATGGCCGTCATCC
GCGCCGCCGAGCGCATGCGCAGCCCCGCCATAATCCAACTCTTCCCCTGG
ACCATGCACTTTCACGGTGCGCACTTCATCCGCTTCGTCGTCGCCGCTGC
ACATGCCGCTTCTGTCCCTGTCGCCGTGCATCTCGACCACTGCATTAACC
CCGAAGATATTGATCTCGCCCTCACTCTTCCCTTTGACTCGATCATGATC
GATGGGTCAAGCATGAACGAGGCCGAGAATATCGCGGTCTGCGCGAGCAC
TGTCAGCAAGGCGCATGAGCGCGGTATGACGGTTGAGGTTGAGTTAGGGC
GCATTGAGGGAGGGGAGGATGGGCTTCCCAGCGTGGATTTAGGCAGTGTG
TTAACCAGGCCAGGCGATGCGAGGCGGTTCCTGGAGGCGACTCAGGCGGA
CTTTTTGGCGCCGAGCTTTGGGAACGTGCATGGGGGCTACGGACTTGTGG
GAGCGGAGAAATGTTGGGATTTAGACTTGCTTCAACAGATCCAACAGGCT
ATCTCGTCCACCCCGCTGGTCTTGCATGGAACGCACCCGGTCTCCGACGA
GCTGTTTCTCAAGGCCATTGAGTGCGGCATGAGCAAGGTGAATGTCAACC
GGACGGTGCGCGACAAATACACGGAGTTTGTGGCAGAGAACGCAGGCGAG
CTGGAGTTGACGACGCTCAAGGTGCAGGCGGTCGAGGTGTATACCGAGTC
GGTAGAGAGGGTGATGAAACTGCTTGGCTCGGCGGGCAAGGCTTGAATGT
CTAACTGCCCTCAGTCCCCCCACTCGAACCGCACCCGCACCATCCTCCAC
GCCGCAAAGAATGGCAAATACGCCGTCGGCGCCTACAACTGCTATAATAC
CGACGGCATCATGGCCGTCATCCGCGCCGCCGAGCGCATGCGCAGCCCCG
CCATAATCCAACTCTTCCCCTGGACCATGCACTTTCACGGTGCGCACTTC
ATCCGCTTCGTCGTCGCCGCTGCACATGCCGCTTCTGTCCCTGTCGCCGT
GCATCTCGACCACTGCATTAACCCCGAAGATATTGATCTCGCCCTCACTC
TTCCCTTTGACTCGATCATGATCGATGGGTCAAGCATGAACGAGGCCGAG
AATATCGCGGTCTGCGCGAGCACTGTCAGCAAGGCGCATGAGCGCGGTAT
GACGGTTGAGGTTGAGTTAGGGCGCATTGAGGGAGGGGAGGATGGGCTTC
CCAGCGTGGATTTAGGCAGTGTGTTAACCAGGCCAGGCGATGCGAGGCGG
TTCCTGGAGGCGACTCAGGCGGACTTTTTGGCGCCGAGCTTTGGGAACGT
GCATGGGGGCTACGGACTTGTGGGAGCGGAGAAATGTTGGGATTTAGACT
TGCTTCAACAGATCCAACAGGCTATCTCGTCCACCCCGCTGGTCTTGCAT
GGAACGCACCCGGTCTCCGACGAGCTGTTTCTCAAGGCCATTGAGTGCGG
CATGAGCAAGGTGAATGTCAACCGGACGGTGCGCGACAAATACACGGAGT
TTGTGGCAGAGAACGCAGGCGAGCTGGAGTTGACGACGCTCAAGGTGCAG
GCGGTCGAGGTGTATACCGAGTCGGTAGAGAGGGTGATGAAACTGCTTGG
CTCGGCGGGCAAGGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016832 | aldehyde-lyase activity |
| GO:0008270 | zinc ion binding |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000771 |
| DBxref | InterPro:IPR013785 |
| DBxref | PFAM:PF01116 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:25047..26074 + |
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