You are here

Home

CBS51388_009797-T1, CBS51388_009797-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009797-T1
Unique NameCBS51388_009797-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:28612..29007-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009797-T1 ID=CBS51388_009797-T1|Name=CBS51388_009797-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=396bp|location=Sequence derived from alignment at An16:28612..29007- (Aspergillus niger CBS 513.88)
ATGTTCAAGTTCCGCTCCGAAGTAACGGCGGAACATAAAGAGACCTTCGC
TAGAGAACTCAAGAAACTTAAAGATCTGGACTGCGTGAAAGGACATCGAC
TGGTAGTGGGAGGGCCATCTGTGACCGACCCTATTGAACGAAGTAAGGGG
TTCGAGTTTGCACTTCTGAGCTTCCATGAGTCGCTTGCAGACTTGGAAAA
ATATCAGGCAAGCAAGGAACACCACTGGTGAGCGGGAATCTACGTCAGTG
TCCGGGAAGCTGCTAATATGGTCGTTGTGTTTAGGGTTACAAGCACGTAT
ATGTTCCCATACAAGGAGGACCTGGTTCGATTTGATTTCGAAGTTGCGCC
CGAGGACGAGCACATGTTCTTGTTTTCACGGTCAAACATATTTTAG
back to top

Coding sequence (CDS) from alignment at An16:28612..29007-

>CBS51388_009797-T1 ID=CBS51388_009797-T1|Name=CBS51388_009797-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=678bp|location=Sequence derived from alignment at An16:28612..29007- (Aspergillus niger CBS 513.88)
GGTTACAAGCACGTATATGTTCCCATACAAGGAGGACCTGGTTCGATTTG
ATTTCGAAGTTGCGCCCGAGGACGAGCACATGTTCTTGTTTTCACGGTCA
AACATATTTTAGATGTTCAAGTTCCGCTCCGAAGTAACGGCGGAACATAA
AGAGACCTTCGCTAGAGAACTCAAGAAACTTAAAGATCTGGACTGCGTGA
AAGGACATCGACTGGTAGTGGGAGGGCCATCTGTGACCGACCCTATTGAA
CGAAGTAAGGGGTTCGAGTTTGCACTTCTGAGCTTCCATGAGTCGCTTGC
AGACTTGGAAAAATATCAGGCAAGCAAGGAACACCACTGGGTTACAAGCA
CGTATATGTTCCCATACAAGGAGGACCTGGTTCGATTTGATTTCGAAGTT
GCGCCCGAGGACGAGCACATGTTCTTGTTTTCACGGTCAAACATATTTTA
GATGTTCAAGTTCCGCTCCGAAGTAACGGCGGAACATAAAGAGACCTTCG
CTAGAGAACTCAAGAAACTTAAAGATCTGGACTGCGTGAAAGGACATCGA
CTGGTAGTGGGAGGGCCATCTGTGACCGACCCTATTGAACGAAGTAAGGG
GTTCGAGTTTGCACTTCTGAGCTTCCATGAGTCGCTTGCAGACTTGGAAA
AATATCAGGCAAGCAAGGAACACCACTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009797CBS51388_009797Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009797-T1CBS51388_009797-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009797-T1.cdsCBS51388_009797-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009797-T1.exon2CBS51388_009797-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009797-T1.exon1CBS51388_009797-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR013097
DBxrefPFAM:PF07876
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:28612..29007 -
Powered by Drupal